RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 TTC6Q86TZ1 520 aa25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 CCAR1Q8IX12 1150 aaKnown RBP25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 SOCS4Q8WXH5 440 aa25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 DNAJC2Q99543 621 aaKnown RBP25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 COL11A1P12107 1806 aaPredicted RBP25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 CNMDO75829 334 aa25.19■■□□□ 1.62
TSPAN4-219ENST00000530404 POLR3DP05423 398 aaPredicted RBP25.19■■□□□ 1.62
TSPAN4-219ENST00000530404 PDE6AP16499 860 aa25.19■■□□□ 1.62
TSPAN4-219ENST00000530404 CAPN2P17655 700 aa25.19■■□□□ 1.62
TSPAN4-219ENST00000530404 MAPK4P31152 587 aa25.19■■□□□ 1.62
TSPAN4-219ENST00000530404 MNX1P50219 401 aaPredicted RBP25.19■■□□□ 1.62
TSPAN4-219ENST00000530404 C7orf61Q8IZ16 206 aa25.19■■□□□ 1.62
TSPAN4-219ENST00000530404 EDC3Q96F86 508 aaKnown RBP25.19■■□□□ 1.62
TSPAN4-219ENST00000530404 C12orf42Q96LP6 360 aa25.19■■□□□ 1.62
TSPAN4-219ENST00000530404 GOLIM4O00461 696 aa25.18■■□□□ 1.62
TSPAN4-219ENST00000530404 ZKSCAN1P17029 563 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-219ENST00000530404 HSP90AB4PQ58FF6 505 aa25.18■■□□□ 1.62
TSPAN4-219ENST00000530404 SLC9C2Q5TAH2 1124 aa25.18■■□□□ 1.62
TSPAN4-219ENST00000530404 MAP3K21Q5TCX8 1036 aa25.18■■□□□ 1.62
TSPAN4-219ENST00000530404 USP6NLQ92738 828 aa25.18■■□□□ 1.62
TSPAN4-219ENST00000530404 STAP2Q9UGK3 403 aa25.18■■□□□ 1.62
TSPAN4-219ENST00000530404 COG6Q9Y2V7 657 aa25.18■■□□□ 1.62
TSPAN4-219ENST00000530404 ZNF532Q9HCE3 1301 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 USP17L15C9J2P7 530 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 USP17L13C9JLJ4 530 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 USP17L11C9JVI0 530 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 USP17L18D6R9N7 530 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 USP17L22D6RA61 530 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 USP17L17D6RBQ6 530 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 USP17L19D6RCP7 530 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 USP17L20D6RJB6 530 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 VCAM1P19320 739 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 GUCY1A2P33402 732 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 CACNB2Q08289 660 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 USP17L24Q0WX57 530 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 TTF1Q15361 905 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 MORN1Q5T089 497 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 PLEKHH3Q7Z736 793 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 SIRT2Q8IXJ6 389 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 ANKLE1Q8NAG6 615 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 GTF3C2Q8WUA4 911 aaPredicted RBP25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 SDR42E1Q8WUS8 393 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 CWC22Q9HCG8 908 aaKnown RBP25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 CABP5Q9NP86 173 aa25.17■■□□□ 1.62
TSPAN4-219ENST00000530404 A0A0G2JMZ2 1700 aa25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 XRCC5P13010 732 aaKnown RBP25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 SLFNL1Q499Z3 407 aa25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 WDR78Q5VTH9 848 aa25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 CATSPERGQ6ZRH7 1159 aa25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 CLASRPQ8N2M8 674 aaKnown RBP25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 KIF1BPQ96EK5 621 aa25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 KIAA1683Q9H0B3 1180 aa25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 OGDHLQ9ULD0 1010 aa25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 ZMYND8Q9ULU4 1186 aaPredicted RBP25.16■■□□□ 1.62
TSPAN4-219ENST00000530404 IFIT2P09913 472 aaKnown RBP25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 CYP2D6P10635 497 aa25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 CCND3P30281 292 aaPredicted RBP25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 RGS2P41220 211 aa25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 USP14P54578 494 aa25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 SEPT2Q15019 361 aa25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 LCORLQ8N3X6 602 aa25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 CRNKL1Q9BZJ0 848 aaKnown RBP25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 NBPF3Q9H094 633 aa25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 C11orf49Q9H6J7 331 aa25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 MCM9Q9NXL9 1143 aa25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 RABGAP1Q9Y3P9 1069 aa25.15■■□□□ 1.62
TSPAN4-219ENST00000530404 TCRBV5S4A2TA0A5A2 114 aa25.14■■□□□ 1.62
TSPAN4-219ENST00000530404 MPHOSPH10O00566 681 aaKnown RBP25.14■■□□□ 1.62
TSPAN4-219ENST00000530404 GABPAQ06546 454 aa25.14■■□□□ 1.62
TSPAN4-219ENST00000530404 TMED8Q6PL24 325 aaPredicted RBP25.14■■□□□ 1.62
TSPAN4-219ENST00000530404 RPAP3Q9H6T3 665 aaPredicted RBP25.14■■□□□ 1.62
TSPAN4-219ENST00000530404 BTBD7Q9P203 1132 aa25.14■■□□□ 1.62
TSPAN4-219ENST00000530404 COL6A3P12111 3177 aa25.13■■□□□ 1.61
TSPAN4-219ENST00000530404 RPAP2Q8IXW5 612 aaPredicted RBP25.13■■□□□ 1.61
TSPAN4-219ENST00000530404 SLC44A5Q8NCS7 719 aa25.13■■□□□ 1.61
TSPAN4-219ENST00000530404 APBA2Q99767 749 aa25.13■■□□□ 1.61
TSPAN4-219ENST00000530404 MS4A1P11836 297 aa25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 SYN1P17600 705 aa25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 MAP2K5Q13163 448 aa25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 TRMT44Q8IYL2 757 aaKnown RBP25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 BOLA2Q9H3K6 86 aa25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 ARMT1Q9H993 441 aa25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 DCP1AQ9NPI6 582 aaPredicted RBP25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 ZBTB40Q9NUA8 1239 aa25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 FLRT1Q9NZU1 646 aa25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 PFASO15067 1338 aa25.12■■□□□ 1.61
TSPAN4-219ENST00000530404 PLXNA1Q9UIW2 1896 aa25.11■■□□□ 1.61
TSPAN4-219ENST00000530404 A0A1W2PRG0 241 aa25.11■■□□□ 1.61
TSPAN4-219ENST00000530404 SPDYE16A6NNV3 312 aaPredicted RBP25.11■■□□□ 1.61
TSPAN4-219ENST00000530404 SOX1O00570 391 aaPredicted RBP25.11■■□□□ 1.61
TSPAN4-219ENST00000530404 HMMRO75330 724 aa25.11■■□□□ 1.61
TSPAN4-219ENST00000530404 DYNLL2Q96FJ2 89 aa25.11■■□□□ 1.61
TSPAN4-219ENST00000530404 DDX19BQ9UMR2 479 aa25.11■■□□□ 1.61
TSPAN4-219ENST00000530404 ZNF236Q9UL36 1845 aa25.1■■□□□ 1.61
TSPAN4-219ENST00000530404 PRKAB2O43741 272 aa25.1■■□□□ 1.61
TSPAN4-219ENST00000530404 CHGBP05060 677 aa25.1■■□□□ 1.61
TSPAN4-219ENST00000530404 CCNA1P78396 465 aa25.1■■□□□ 1.61
TSPAN4-219ENST00000530404 SMIM22K7EJ46 135 aa25.09■■□□□ 1.61
TSPAN4-219ENST00000530404 LHX8Q68G74 356 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms