RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 IGSF1Q8N6C5 1336 aa11.74□□□□□ -0.53
CCDC90B-217ENST00000530253 DDX3YO15523 660 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 LRRC37A3O60309 1634 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 MEGF6O75095 1541 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 BMP3P12645 472 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 ATP2B4P23634 1241 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 EVA1CP58658 441 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 BEND4Q6ZU67 534 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 KRTAP19-1Q8IUB9 90 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 GIMAP7Q8NHV1 300 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 PBXIP1Q96AQ6 731 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 FMNL2Q96PY5 1086 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 SALL4Q9UJQ4 1053 aa11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 PARP4Q9UKK3 1724 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 OAS3Q9Y6K5 1087 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-217ENST00000530253 KDRP35968 1356 aa11.72□□□□□ -0.53
CCDC90B-217ENST00000530253 ADAMTSL4Q6UY14 1074 aa11.72□□□□□ -0.53
CCDC90B-217ENST00000530253 TOM1L2Q6ZVM7 507 aa11.72□□□□□ -0.53
CCDC90B-217ENST00000530253 DTX1Q86Y01 620 aa11.72□□□□□ -0.53
CCDC90B-217ENST00000530253 TCP11L2Q8N4U5 519 aa11.72□□□□□ -0.53
CCDC90B-217ENST00000530253 RUSC1Q9BVN2 902 aa11.72□□□□□ -0.53
CCDC90B-217ENST00000530253 PDE2AO00408 941 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-217ENST00000530253 GAS2O43903 313 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-217ENST00000530253 NLRP2Q9NX02 1062 aa11.71□□□□□ -0.53
CCDC90B-217ENST00000530253 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-217ENST00000530253 USHBP1Q8N6Y0 703 aa11.7□□□□□ -0.54
CCDC90B-217ENST00000530253 HELQQ8TDG4 1101 aa11.7□□□□□ -0.54
CCDC90B-217ENST00000530253 ZMYND15Q9H091 742 aa11.7□□□□□ -0.54
CCDC90B-217ENST00000530253 DZANK1Q9NVP4 752 aa11.7□□□□□ -0.54
CCDC90B-217ENST00000530253 USP35Q9P2H5 1018 aa11.7□□□□□ -0.54
CCDC90B-217ENST00000530253 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 SHANK3Q9BYB0 1731 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 PRR19A6NJB7 356 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 ANP32CO43423 234 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 DIAPH1O60610 1272 aaKnown RBP11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 WNT11O96014 354 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 TAL1P17542 331 aaPredicted RBP11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 PREPP48147 710 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 NLRP12P59046 1061 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 C19orf57Q0VDD7 668 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 AEBP1Q8IUX7 1158 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 SHKBP1Q8TBC3 707 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 SLC7A3Q8WY07 619 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 EDEM1Q92611 657 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 CNTN3Q9P232 1028 aa11.69□□□□□ -0.54
CCDC90B-217ENST00000530253 PLEKHG2Q9H7P9 1386 aa11.68□□□□□ -0.54
CCDC90B-217ENST00000530253 MEGF11A6BM72 1044 aa11.68□□□□□ -0.54
CCDC90B-217ENST00000530253 CCDC184Q52MB2 194 aa11.68□□□□□ -0.54
CCDC90B-217ENST00000530253 ATCAYQ86WG3 371 aa11.68□□□□□ -0.54
CCDC90B-217ENST00000530253 CFAP53Q96M91 514 aa11.68□□□□□ -0.54
CCDC90B-217ENST00000530253 EIF4EBP3O60516 100 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 DNM1Q05193 864 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 CPSF6Q16630 551 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 NOM1Q5C9Z4 860 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 KRT27Q7Z3Y8 459 aa11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 C1orf127Q8N9H9 656 aa11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 TMEM102Q8N9M5 508 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 SEPT3Q9UH03 358 aa11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 SOX13Q9UN79 622 aa11.67□□□□□ -0.54
CCDC90B-217ENST00000530253 NFKBIEO00221 500 aa11.66□□□□□ -0.54
CCDC90B-217ENST00000530253 IL2RBP14784 551 aa11.66□□□□□ -0.54
CCDC90B-217ENST00000530253 YBX3P16989 372 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC90B-217ENST00000530253 MZF1P28698 734 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-217ENST00000530253 DEFB132Q7Z7B7 95 aa11.66□□□□□ -0.54
CCDC90B-217ENST00000530253 CCDC97Q96F63 343 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-217ENST00000530253 PDGFAP04085 211 aa11.65□□□□□ -0.54
CCDC90B-217ENST00000530253 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
CCDC90B-217ENST00000530253 SULT6B1Q6IMI4 303 aa11.65□□□□□ -0.54
CCDC90B-217ENST00000530253 ALKBH2Q6NS38 261 aa11.65□□□□□ -0.54
CCDC90B-217ENST00000530253 BSNDQ8WZ55 320 aa11.65□□□□□ -0.54
CCDC90B-217ENST00000530253 CYP4F12Q9HCS2 524 aa11.64□□□□□ -0.55
CCDC90B-217ENST00000530253 ATG3Q9NT62 314 aa11.64□□□□□ -0.55
CCDC90B-217ENST00000530253 PIM2Q9P1W9 311 aa11.64□□□□□ -0.55
CCDC90B-217ENST00000530253 WDR64B1ANS9 1081 aa11.63□□□□□ -0.55
CCDC90B-217ENST00000530253 U2SURPO15042 1029 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-217ENST00000530253 HMOX1P09601 288 aa11.63□□□□□ -0.55
CCDC90B-217ENST00000530253 EDN3P14138 238 aa11.63□□□□□ -0.55
CCDC90B-217ENST00000530253 MAP4P27816 1152 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-217ENST00000530253 IKBKEQ14164 716 aa11.63□□□□□ -0.55
CCDC90B-217ENST00000530253 RAPGEF4Q8WZA2 1011 aa11.63□□□□□ -0.55
CCDC90B-217ENST00000530253 RNF114Q9Y508 228 aa11.63□□□□□ -0.55
CCDC90B-217ENST00000530253 SOX17Q9H6I2 414 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-217ENST00000530253 SUGCTQ9HAC7 445 aa11.62□□□□□ -0.55
CCDC90B-217ENST00000530253 SERPINA10Q9UK55 444 aa11.62□□□□□ -0.55
CCDC90B-217ENST00000530253 NUDCQ9Y266 331 aa11.62□□□□□ -0.55
CCDC90B-217ENST00000530253 BCL9O00512 1426 aa11.61□□□□□ -0.55
CCDC90B-217ENST00000530253 U2AF1L5P0DN76 240 aaPredicted RBP11.61□□□□□ -0.55
CCDC90B-217ENST00000530253 ACPPP15309 386 aa11.61□□□□□ -0.55
CCDC90B-217ENST00000530253 U2AF1Q01081 240 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC90B-217ENST00000530253 EHHADHQ08426 723 aa11.61□□□□□ -0.55
CCDC90B-217ENST00000530253 DDB1Q16531 1140 aa11.61□□□□□ -0.55
CCDC90B-217ENST00000530253 MARCH10Q8NA82 808 aaPredicted RBP11.61□□□□□ -0.55
CCDC90B-217ENST00000530253 MFSD14AQ96MC6 490 aa11.61□□□□□ -0.55
CCDC90B-217ENST00000530253 OSMRQ99650 979 aa11.61□□□□□ -0.55
CCDC90B-217ENST00000530253 TOGARAM1Q9Y4F4 1720 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms