RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 VCAM1P19320 739 aa13.46□□□□□ -0.25
CTSC-206ENST00000529974 SEPT2Q15019 361 aa13.46□□□□□ -0.25
CTSC-206ENST00000529974 ZYXQ15942 572 aaKnown RBP13.46□□□□□ -0.25
CTSC-206ENST00000529974 PXYLP1Q8TE99 480 aa13.46□□□□□ -0.25
CTSC-206ENST00000529974 DYNLL2Q96FJ2 89 aa13.46□□□□□ -0.25
CTSC-206ENST00000529974 FEZ1Q99689 392 aa13.46□□□□□ -0.25
CTSC-206ENST00000529974 PUS7LQ9H0K6 701 aaKnown RBP13.46□□□□□ -0.25
CTSC-206ENST00000529974 UNC93B1Q9H1C4 597 aa13.46□□□□□ -0.25
CTSC-206ENST00000529974 CYP2D7A0A087X1C5 515 aa13.45□□□□□ -0.26
CTSC-206ENST00000529974 GJB1P08034 283 aa13.45□□□□□ -0.26
CTSC-206ENST00000529974 UBE2Q1Q7Z7E8 422 aa13.45□□□□□ -0.26
CTSC-206ENST00000529974 OTUD7AQ8TE49 926 aaPredicted RBP13.45□□□□□ -0.26
CTSC-206ENST00000529974 COA7Q96BR5 231 aa13.45□□□□□ -0.26
CTSC-206ENST00000529974 ATP8A2Q9NTI2 1148 aa13.45□□□□□ -0.26
CTSC-206ENST00000529974 RBPJLQ9UBG7 517 aa13.45□□□□□ -0.26
CTSC-206ENST00000529974 GJD2Q9UKL4 321 aa13.45□□□□□ -0.26
CTSC-206ENST00000529974 ZNF236Q9UL36 1845 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 A0A1W2PRG0 241 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 CNMDO75829 334 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 GJA8P48165 433 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 USP14P54578 494 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 ERVK-9P63128 1117 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 ERVK-24P63145 666 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 UBXN2AP68543 259 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 KBTBD3Q8NAB2 608 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 RNF208Q9H0X6 261 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 PORCNQ9H237 461 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 CABP5Q9NP86 173 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 BIN2Q9UBW5 565 aaPredicted RBP13.44□□□□□ -0.26
CTSC-206ENST00000529974 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 ALPK3Q96L96 1907 aa13.44□□□□□ -0.26
CTSC-206ENST00000529974 FRMPD3Q5JV73 1810 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 SALL3Q9BXA9 1300 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 SLC34A2O95436 690 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 AKR1B1P15121 316 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 C12orf60Q5U649 245 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 ZSCAN25Q6NSZ9 544 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 GPRC5AQ8NFJ5 357 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 PI4K2BQ8TCG2 481 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 GTF3C2Q8WUA4 911 aaPredicted RBP13.43□□□□□ -0.26
CTSC-206ENST00000529974 GPATCH3Q96I76 525 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 CRBNQ96SW2 442 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 PAGR1Q9BTK6 254 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 PAK6Q9NQU5 681 aaPredicted RBP13.43□□□□□ -0.26
CTSC-206ENST00000529974 SWAP70Q9UH65 585 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 ROBO3Q96MS0 1386 aa13.43□□□□□ -0.26
CTSC-206ENST00000529974 COL11A1P12107 1806 aaPredicted RBP13.42□□□□□ -0.26
CTSC-206ENST00000529974 SPDYE16A6NNV3 312 aaPredicted RBP13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L15C9J2P7 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L13C9JLJ4 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L12C9JPN9 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L11C9JVI0 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L21D6R901 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L18D6R9N7 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L22D6RA61 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L17D6RBQ6 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L19D6RCP7 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L20D6RJB6 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 MPHOSPH10O00566 681 aaKnown RBP13.42□□□□□ -0.26
CTSC-206ENST00000529974 USP17L24Q0WX57 530 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 TRIM32Q13049 653 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 Q3C1V9 767 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 KIAA1755Q5JYT7 1200 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 LBX2Q6XYB7 198 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 CATSPERGQ6ZRH7 1159 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 TMEM179Q6ZVK1 233 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 C16orf86Q6ZW13 317 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 SIAH1Q8IUQ4 282 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 U2AF1L4Q8WU68 220 aaKnown RBP13.42□□□□□ -0.26
CTSC-206ENST00000529974 TRIB2Q92519 343 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 OSBP2Q969R2 916 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 STRBPQ96SI9 672 aaKnown RBP13.42□□□□□ -0.26
CTSC-206ENST00000529974 RPAP3Q9H6T3 665 aaPredicted RBP13.42□□□□□ -0.26
CTSC-206ENST00000529974 EPB41L4AQ9HCS5 686 aaPredicted RBP13.42□□□□□ -0.26
CTSC-206ENST00000529974 SLC4A4Q9Y6R1 1079 aa13.42□□□□□ -0.26
CTSC-206ENST00000529974 TTC41PQ6P2S7 1318 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 SZT2Q5T011 3432 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 HMGCRP04035 888 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 MAPK4P31152 587 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 CDK8P49336 464 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 SOCS4Q8WXH5 440 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 APPBP2Q92624 585 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 USP6NLQ92738 828 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 YTHDC1Q96MU7 727 aaKnown RBP13.41□□□□□ -0.26
CTSC-206ENST00000529974 RABGAP1Q9Y3P9 1069 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 LAMA3Q16787 3333 aa13.41□□□□□ -0.26
CTSC-206ENST00000529974 GSG1L2A8MUP6 293 aa13.4□□□□□ -0.26
CTSC-206ENST00000529974 M0R2C6 588 aa13.4□□□□□ -0.26
CTSC-206ENST00000529974 RNF113AO15541 343 aaKnown RBP13.4□□□□□ -0.26
CTSC-206ENST00000529974 ICA1Q05084 483 aa13.4□□□□□ -0.26
CTSC-206ENST00000529974 MORN1Q5T089 497 aa13.4□□□□□ -0.26
CTSC-206ENST00000529974 GPR142Q7Z601 462 aa13.4□□□□□ -0.26
CTSC-206ENST00000529974 DEFB118Q96PH6 123 aa13.4□□□□□ -0.26
CTSC-206ENST00000529974 CRISPLD2Q9H0B8 497 aa13.4□□□□□ -0.26
CTSC-206ENST00000529974 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTSC-206ENST00000529974 BTBD7Q9P203 1132 aa13.4□□□□□ -0.26
CTSC-206ENST00000529974 ARPP21Q9UBL0 812 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms