RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 XRN1Q8IZH2 1706 aaKnown RBP7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 METP08581 1390 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 MST1RQ04912 1400 aa7.49□□□□□ -1.21
AMBRA1-209ENST00000529963 C9orf172C9J069 976 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 GDF11O95390 407 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 PF4P02776 101 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 DRD2P14416 443 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 YY1P25490 414 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 AGMOQ6ZNB7 445 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 NT5DC4Q86YG4 428 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 WFDC12Q8WWY7 111 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 JARID2Q92833 1246 aaPredicted RBP7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 LRRC59Q96AG4 307 aaKnown RBP7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 NACC1Q96RE7 527 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 AKTIPQ9H8T0 292 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 RAD18Q9NS91 495 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 SETD5Q9C0A6 1442 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 ADGRL3Q9HAR2 1447 aa7.48□□□□□ -1.21
AMBRA1-209ENST00000529963 GLB1P16278 677 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 LMNB1P20700 586 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 AKAP4Q5JQC9 854 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 EXOSC6Q5RKV6 272 aaKnown RBP7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 NUTM2GQ5VZR2 741 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 USP48Q86UV5 1035 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 ACSBG1Q96GR2 724 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 TMEM74Q96NL1 305 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 RSRP1Q9BUV0 290 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 TMPRSS13Q9BYE2 586 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 METTL5Q9NRN9 209 aaKnown RBP7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 NEXMIFQ5QGS0 1516 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 CDK8P49336 464 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 RACK1P63244 317 aaKnown RBP7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 ADGRE1Q14246 886 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 LRRC14Q15048 493 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 WDR18Q9BV38 432 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 RNF208Q9H0X6 261 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 CYP8B1Q9UNU6 501 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 RRBP1Q9P2E9 1410 aaKnown RBP7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 CLTCL1P53675 1640 aa7.47□□□□□ -1.21
AMBRA1-209ENST00000529963 NAIPQ13075 1403 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 PTCH1Q13635 1447 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 AOC2O75106 756 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 ITGB2P05107 769 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 NRG1Q02297 640 aaPredicted RBP7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 CAMK2GQ13555 558 aaPredicted RBP7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 BNC2Q6ZN30 1099 aaPredicted RBP7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 ALYREFQ86V81 257 aaKnown RBP7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 TMEM130Q8N3G9 435 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 C12orf50Q8NA57 414 aaPredicted RBP7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 GAL3ST3Q96A11 431 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 RHOVQ96L33 236 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 IGSF5Q9NSI5 407 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 PCDHA4Q9UN74 947 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 CSADQ9Y600 493 aa7.46□□□□□ -1.22
AMBRA1-209ENST00000529963 NHSL1Q5SYE7 1610 aa7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 PNPLA6Q8IY17 1366 aa7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 RPGRIP1LQ68CZ1 1315 aa7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 RLBP1P12271 317 aa7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 RPS26P62854 115 aaKnown RBP7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 PLA2G4EQ3MJ16 856 aa7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 TMEM151AQ8N4L1 468 aa7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 GOLM1Q8NBJ4 401 aa7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 C8orf37Q96NL8 207 aa7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 UBL7Q96S82 380 aaPredicted RBP7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 PPP1R9AQ9ULJ8 1098 aa7.45□□□□□ -1.22
AMBRA1-209ENST00000529963 C1orf167Q5SNV9 1468 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 KIF1BO60333 1816 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 DCDC2CA8MYV0 355 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 TRIM37O94972 964 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 PREPP48147 710 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 RAD51AP2Q09MP3 1159 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 FDX2Q6P4F2 183 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 FBXL19Q6PCT2 694 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 DDX17Q92841 729 aaKnown RBP7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 MEGF10Q96KG7 1140 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 MIR1-1HGQ9H1L0 117 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 ADAMTS1Q9UHI8 967 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 DDX41Q9UJV9 622 aaKnown RBP7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 TRPC5Q9UL62 973 aaPredicted RBP7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 AP4E1Q9UPM8 1137 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 HFM1A2PYH4 1435 aa7.44□□□□□ -1.22
AMBRA1-209ENST00000529963 NALCNQ8IZF0 1738 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 MEGF11A6BM72 1044 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 F13A1P00488 732 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 ERCC5P28715 1186 aaPredicted RBP7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 EIF4A3P38919 411 aaKnown RBP7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 PWP1Q13610 501 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 INPP5AQ14642 412 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 SNAP47Q5SQN1 464 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 TXNRD3Q86VQ6 643 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 CYP4F12Q9HCS2 524 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 CACNA2D2Q9NY47 1150 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 PRAG1Q86YV5 1406 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 ROBO2Q9HCK4 1378 aa7.43□□□□□ -1.22
AMBRA1-209ENST00000529963 ADH5P11766 374 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 LMNB2Q03252 620 aa7.42□□□□□ -1.22
AMBRA1-209ENST00000529963 KIF4BQ2VIQ3 1234 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms