RNA–Protein interactions for RNA: ENST00000529922.1

AP001999.3-201, humanhuman

TSL 2 BASIC

Gene AP001999.3, Length 455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.3-201ENST00000529922 POLR3DP05423 398 aaPredicted RBP11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 XRCC5P13010 732 aaKnown RBP11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 USP14P54578 494 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 EVX2Q03828 476 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 UBE3CQ15386 1083 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 ABCB5Q2M3G0 1257 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 HABP4Q5JVS0 413 aaKnown RBP11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 LBX2Q6XYB7 198 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 CATSPERGQ6ZRH7 1159 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 SDR42E1Q8WUS8 393 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 USP6NLQ92738 828 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 LRRCC1Q9C099 1032 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 DCTPP1Q9H773 170 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 MYO5AQ9Y4I1 1855 aaKnown RBP11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 MAST2Q6P0Q8 1798 aa11.18□□□□□ -0.62
AP001999.3-201ENST00000529922 USP17L15C9J2P7 530 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 USP17L13C9JLJ4 530 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 USP17L11C9JVI0 530 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 USP17L18D6R9N7 530 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 USP17L22D6RA61 530 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 USP17L17D6RBQ6 530 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 USP17L19D6RCP7 530 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 USP17L20D6RJB6 530 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 H0YGN5 161 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 PRKAB2O43741 272 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 HMGCRP04035 888 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 MAPK4P31152 587 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 ERVK-9P63128 1117 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 ERVK-24P63145 666 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 USP17L24Q0WX57 530 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 RAB3GAP1Q15042 981 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 SLFNL1Q499Z3 407 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 MAP3K21Q5TCX8 1036 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 DEFB118Q96PH6 123 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 ARMT1Q9H993 441 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 CABP5Q9NP86 173 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 ATP8A2Q9NTI2 1148 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 RABGAP1Q9Y3P9 1069 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 LOC285556D6RIA3 1793 aa11.17□□□□□ -0.62
AP001999.3-201ENST00000529922 A0A1W2PRG0 241 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 CNMDO75829 334 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 CHGBP05060 677 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 CYP2D6P10635 497 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 VCAM1P19320 739 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 SEPT2Q15019 361 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 MORN1Q5T089 497 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 SIAH1Q8IUQ4 282 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 SOCS4Q8WXH5 440 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 PORCNQ9H237 461 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 SWAP70Q9UH65 585 aa11.16□□□□□ -0.62
AP001999.3-201ENST00000529922 RPTORQ8N122 1335 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 FOCADQ5VW36 1801 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 SMARCA5O60264 1052 aaPredicted RBP11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 MBD4O95243 580 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 TFRCP02786 760 aaKnown RBP11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 TRIM32Q13049 653 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 C12orf60Q5U649 245 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 GPR142Q7Z601 462 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 SLC44A5Q8NCS7 719 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 TRIB2Q92519 343 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 FEZ1Q99689 392 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 NUDT12Q9BQG2 462 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 HTATIP2Q9BUP3 242 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 ECHDC1Q9NTX5 307 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 COLQQ9Y215 455 aaPredicted RBP11.15□□□□□ -0.62
AP001999.3-201ENST00000529922 CDK5RAP2Q96SN8 1893 aa11.15□□□□□ -0.63
AP001999.3-201ENST00000529922 SPDYE16A6NNV3 312 aaPredicted RBP11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 SMIM22K7EJ46 135 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 CYP2B6P20813 491 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 MNX1P50219 401 aaPredicted RBP11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 ZYXQ15942 572 aaKnown RBP11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 ZSCAN25Q6NSZ9 544 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 TMEM179Q6ZVK1 233 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 PLEKHH3Q7Z736 793 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 TRMT44Q8IYL2 757 aaKnown RBP11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 ANKLE1Q8NAG6 615 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 DPF3Q92784 378 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 DYNLL2Q96FJ2 89 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 PUS7LQ9H0K6 701 aaKnown RBP11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 PRO3102Q9H379 93 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 HMX1Q9NP08 348 aaPredicted RBP11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 BTBD7Q9P203 1132 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 MGAMO43451 1857 aa11.14□□□□□ -0.63
AP001999.3-201ENST00000529922 USP17L12C9JPN9 530 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 USP17L21D6R901 530 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 IGHA2P01877 340 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 HOXC6P09630 235 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 AKR1B1P15121 316 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 CDK8P49336 464 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 CCNA1P78396 465 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 COG2Q14746 738 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 KIAA1755Q5JYT7 1200 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 CCDC17Q96LX7 622 aa11.13□□□□□ -0.63
AP001999.3-201ENST00000529922 STRBPQ96SI9 672 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms