RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 FAM95CA0A1B0GW59 222 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 GDF11O95390 407 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 CHRNA4P43681 627 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 IFRD2Q12894 506 aaPredicted RBP5.9□□□□□ -1.46
SVIP-203ENST00000529848 VHLLQ6RSH7 139 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 C6orf15Q6UXA7 325 aaPredicted RBP5.9□□□□□ -1.46
SVIP-203ENST00000529848 FAM20CQ8IXL6 584 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 FAM178BQ8IXR5 827 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 ARMC10Q8N2F6 343 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 BAHD1Q8TBE0 780 aaPredicted RBP5.9□□□□□ -1.46
SVIP-203ENST00000529848 DHRS1Q96LJ7 313 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 MIPEPQ99797 713 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 CCDC113Q9H0I3 377 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.9□□□□□ -1.46
SVIP-203ENST00000529848 SNTG2Q9NY99 539 aa5.9□□□□□ -1.46
SVIP-203ENST00000529848 TMA7Q9Y2S6 64 aaKnown RBP5.9□□□□□ -1.46
SVIP-203ENST00000529848 KRBA1A5PL33 1030 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 B2RBV5 119 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 SMARCA5O60264 1052 aaPredicted RBP5.89□□□□□ -1.47
SVIP-203ENST00000529848 CLEC3AO75596 197 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 GJB6O95452 261 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 SLC7A5Q01650 507 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 RASA3Q14644 834 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 NCAPHQ15003 741 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 BBS9Q3SYG4 887 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 GNPTABQ3T906 1256 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 GIMAP6Q6P9H5 292 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 LRP10Q7Z4F1 713 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 GIMAP7Q8NHV1 300 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 DCAF5Q96JK2 942 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 SLC6A18Q96N87 628 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 MSRB2Q9Y3D2 182 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 LTBP3Q9NS15 1303 aa5.89□□□□□ -1.47
SVIP-203ENST00000529848 C1QTNF9BB2RNN3 333 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 PDPK1O15530 556 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 UBOX5O94941 541 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 KIAA1211LQ6NV74 962 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 LETMD1Q6P1Q0 360 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 BEND4Q6ZU67 534 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 CD163Q86VB7 1156 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 TMEM151AQ8N4L1 468 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 MICAL1Q8TDZ2 1067 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 SMARCC1Q92922 1105 aaPredicted RBP5.88□□□□□ -1.47
SVIP-203ENST00000529848 PRDM10Q9NQV6 1147 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 SUCOQ9UBS9 1254 aaKnown RBP5.88□□□□□ -1.47
SVIP-203ENST00000529848 ZNF214Q9UL59 606 aaPredicted RBP5.88□□□□□ -1.47
SVIP-203ENST00000529848 PCDHB10Q9UN67 800 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 CEP131Q9UPN4 1083 aa5.88□□□□□ -1.47
SVIP-203ENST00000529848 DYNC1LI2O43237 492 aaPredicted RBP5.87□□□□□ -1.47
SVIP-203ENST00000529848 ETV3P41162 512 aa5.87□□□□□ -1.47
SVIP-203ENST00000529848 GATA4P43694 442 aa5.87□□□□□ -1.47
SVIP-203ENST00000529848 PMS1P54277 932 aaKnown RBP5.87□□□□□ -1.47
SVIP-203ENST00000529848 CDK5R2Q13319 367 aa5.87□□□□□ -1.47
SVIP-203ENST00000529848 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
SVIP-203ENST00000529848 TDRD10Q5VZ19 366 aaKnown RBP5.87□□□□□ -1.47
SVIP-203ENST00000529848 ZNF746Q6NUN9 644 aaPredicted RBP5.87□□□□□ -1.47
SVIP-203ENST00000529848 EEPD1Q7L9B9 569 aa5.87□□□□□ -1.47
SVIP-203ENST00000529848 CLEC10AQ8IUN9 316 aa5.87□□□□□ -1.47
SVIP-203ENST00000529848 TMEM192Q8IY95 271 aa5.87□□□□□ -1.47
SVIP-203ENST00000529848 TOP6BLQ8N6T0 577 aa5.87□□□□□ -1.47
SVIP-203ENST00000529848 TP53INP1Q96A56 240 aa5.87□□□□□ -1.47
SVIP-203ENST00000529848 TLDC2A0PJX2 215 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 FAM221BA6H8Z2 402 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 SLITRK5O94991 958 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 NAT2P11245 290 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 CYP7A1P22680 504 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 RNF4P78317 190 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 MTERF2Q49AM1 385 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 SEZ6L2Q6UXD5 910 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 CDH24Q86UP0 819 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 CCDC144CPQ8IYA2 1237 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 ZNF512BQ96KM6 892 aaPredicted RBP5.86□□□□□ -1.47
SVIP-203ENST00000529848 FAM83CQ9BQN1 747 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 MKRN2Q9H000 416 aaKnown RBP5.86□□□□□ -1.47
SVIP-203ENST00000529848 FAM86C1Q9NVL1 165 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 TPX2Q9ULW0 747 aaKnown RBP5.86□□□□□ -1.47
SVIP-203ENST00000529848 RAXQ9Y2V3 346 aa5.86□□□□□ -1.47
SVIP-203ENST00000529848 TP53P04637 393 aaPredicted RBP5.85□□□□□ -1.47
SVIP-203ENST00000529848 PPFIBP1Q86W92 1011 aa5.85□□□□□ -1.47
SVIP-203ENST00000529848 ST13P5Q8NFI4 369 aaPredicted RBP5.85□□□□□ -1.47
SVIP-203ENST00000529848 DNAJB8Q8NHS0 232 aa5.85□□□□□ -1.47
SVIP-203ENST00000529848 PPP1R13LQ8WUF5 828 aa5.85□□□□□ -1.47
SVIP-203ENST00000529848 KLHL6Q8WZ60 621 aa5.85□□□□□ -1.47
SVIP-203ENST00000529848 KREMEN1Q96MU8 473 aa5.85□□□□□ -1.47
SVIP-203ENST00000529848 TBC1D32Q96NH3 1257 aa5.85□□□□□ -1.47
SVIP-203ENST00000529848 PSMG3-AS1Q96PY0 264 aa5.85□□□□□ -1.47
SVIP-203ENST00000529848 SSBP4Q9BWG4 385 aaPredicted RBP5.85□□□□□ -1.47
SVIP-203ENST00000529848 C1GALT1Q9NS00 363 aa5.85□□□□□ -1.47
SVIP-203ENST00000529848 STOML1Q9UBI4 398 aa5.85□□□□□ -1.47
SVIP-203ENST00000529848 SUSD5O60279 629 aa5.84□□□□□ -1.47
SVIP-203ENST00000529848 FAM87AP0C7U9 286 aa5.84□□□□□ -1.47
SVIP-203ENST00000529848 PLA2G4EQ3MJ16 856 aa5.84□□□□□ -1.47
SVIP-203ENST00000529848 HEATR6Q6AI08 1181 aaKnown RBP5.84□□□□□ -1.47
SVIP-203ENST00000529848 MRM1Q6IN84 353 aaKnown RBP5.84□□□□□ -1.47
SVIP-203ENST00000529848 RIN3Q8TB24 985 aa5.84□□□□□ -1.47
SVIP-203ENST00000529848 RNF141Q8WVD5 230 aa5.84□□□□□ -1.47
SVIP-203ENST00000529848 DNAJC7Q99615 494 aa5.84□□□□□ -1.47
SVIP-203ENST00000529848 DUSP23Q9BVJ7 150 aa5.84□□□□□ -1.47
SVIP-203ENST00000529848 ASPNQ9BXN1 380 aa5.84□□□□□ -1.47
SVIP-203ENST00000529848 C7orf69Q9H7B7 122 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms