RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 USP17L20D6RJB6 530 aa15.22■□□□□ 0.03
PACS1-210ENST00000529795 GPAA1O43292 621 aa15.22■□□□□ 0.03
PACS1-210ENST00000529795 SLC3A2P08195 630 aaKnown RBP15.22■□□□□ 0.03
PACS1-210ENST00000529795 CDK8P49336 464 aa15.22■□□□□ 0.03
PACS1-210ENST00000529795 USP17L24Q0WX57 530 aa15.22■□□□□ 0.03
PACS1-210ENST00000529795 CTR9Q6PD62 1173 aa15.22■□□□□ 0.03
PACS1-210ENST00000529795 C16orf86Q6ZW13 317 aa15.22■□□□□ 0.03
PACS1-210ENST00000529795 CCAR1Q8IX12 1150 aaKnown RBP15.22■□□□□ 0.03
PACS1-210ENST00000529795 ANKRD13CQ8N6S4 541 aa15.22■□□□□ 0.03
PACS1-210ENST00000529795 OSBP2Q969R2 916 aa15.22■□□□□ 0.03
PACS1-210ENST00000529795 PTCH2Q9Y6C5 1203 aa15.22■□□□□ 0.03
PACS1-210ENST00000529795 KIAA0100Q14667 2235 aaKnown RBP15.21■□□□□ 0.03
PACS1-210ENST00000529795 MYPNQ86TC9 1320 aa15.21■□□□□ 0.03
PACS1-210ENST00000529795 SALL3Q9BXA9 1300 aa15.21■□□□□ 0.03
PACS1-210ENST00000529795 TNPO2O14787 897 aaKnown RBP15.21■□□□□ 0.03
PACS1-210ENST00000529795 CAPN2P17655 700 aa15.21■□□□□ 0.03
PACS1-210ENST00000529795 TDO2P48775 406 aa15.21■□□□□ 0.03
PACS1-210ENST00000529795 JAG1P78504 1218 aa15.21■□□□□ 0.03
PACS1-210ENST00000529795 CHD1LQ86WJ1 897 aa15.21■□□□□ 0.03
PACS1-210ENST00000529795 ARHGAP39Q9C0H5 1083 aa15.21■□□□□ 0.03
PACS1-210ENST00000529795 MKNK2Q9HBH9 465 aa15.21■□□□□ 0.03
PACS1-210ENST00000529795 GSG1L2A8MUP6 293 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 GRK4P32298 578 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 SOX10P56693 466 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 HERVK_113P62684 666 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 UBXN2AP68543 259 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 CCNA1P78396 465 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 SEPT2Q15019 361 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 SLFNL1Q499Z3 407 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 ZMYM1Q5SVZ6 1142 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 GPRC5AQ8NFJ5 357 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 LPAR1Q92633 364 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 LNPKQ9C0E8 428 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 KANSL2Q9H9L4 492 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 HELLSQ9NRZ9 838 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 EMILIN3Q9NT22 766 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 HOXC10Q9NYD6 342 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 MORF4L1Q9UBU8 362 aa15.2■□□□□ 0.02
PACS1-210ENST00000529795 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 MINDY4BA8MYZ0 360 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 CYP2D6P10635 497 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 MFAP1P55081 439 aaKnown RBP15.19■□□□□ 0.02
PACS1-210ENST00000529795 NUCB1Q02818 461 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 PDE4BQ07343 736 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 IRF5Q13568 498 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 PPP4R3BQ5MIZ7 849 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 B4GALNT3Q6L9W6 998 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 SLAIN1Q8ND83 568 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 OTUD7AQ8TE49 926 aaPredicted RBP15.19■□□□□ 0.02
PACS1-210ENST00000529795 PXYLP1Q8TE99 480 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 DYNLL2Q96FJ2 89 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 ZNF333Q96JL9 665 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 P2RX7Q99572 595 aaKnown RBP15.19■□□□□ 0.02
PACS1-210ENST00000529795 NAPBQ9H115 298 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 OSBPL3Q9H4L5 887 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 BIN2Q9UBW5 565 aaPredicted RBP15.19■□□□□ 0.02
PACS1-210ENST00000529795 RABGAP1Q9Y3P9 1069 aa15.19■□□□□ 0.02
PACS1-210ENST00000529795 RBBP6Q7Z6E9 1792 aaKnown RBP15.19■□□□□ 0.02
PACS1-210ENST00000529795 TRIM6-TRIM34B2RNG4 842 aa15.18■□□□□ 0.02
PACS1-210ENST00000529795 MAPK4P31152 587 aa15.18■□□□□ 0.02
PACS1-210ENST00000529795 GUCY1A2P33402 732 aa15.18■□□□□ 0.02
PACS1-210ENST00000529795 ICA1Q05084 483 aa15.18■□□□□ 0.02
PACS1-210ENST00000529795 ZYXQ15942 572 aaKnown RBP15.18■□□□□ 0.02
PACS1-210ENST00000529795 CATSPERGQ6ZRH7 1159 aa15.18■□□□□ 0.02
PACS1-210ENST00000529795 IFNL3Q8IZI9 196 aa15.18■□□□□ 0.02
PACS1-210ENST00000529795 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
PACS1-210ENST00000529795 CWC22Q9HCG8 908 aaKnown RBP15.18■□□□□ 0.02
PACS1-210ENST00000529795 HIP1O00291 1037 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 CHGBP05060 677 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 VCAM1P19320 739 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 COG2Q14746 738 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 SHROOM1Q2M3G4 852 aaPredicted RBP15.17■□□□□ 0.02
PACS1-210ENST00000529795 LBX2Q6XYB7 198 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 SLC44A5Q8NCS7 719 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 NKX2-3Q8TAU0 364 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 ACER1Q8TDN7 264 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 GOPCQ9HD26 462 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 TMX2Q9Y320 296 aa15.17■□□□□ 0.02
PACS1-210ENST00000529795 ROBO3Q96MS0 1386 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 ZSWIM8A7E2V4 1837 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 CYP2D7A0A087X1C5 515 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 M0R2C6 588 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 ECM2O94769 699 aaPredicted RBP15.16■□□□□ 0.02
PACS1-210ENST00000529795 IGHDP01880 384 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 AKR1B1P15121 316 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 CAP1Q01518 475 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 PRKCZQ05513 592 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 MCMDC2Q4G0Z9 681 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 TRMT44Q8IYL2 757 aaKnown RBP15.16■□□□□ 0.02
PACS1-210ENST00000529795 MB21D1Q8N884 522 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 RILPL2Q969X0 211 aa15.16■□□□□ 0.02
PACS1-210ENST00000529795 WDR46O15213 610 aaKnown RBP15.15■□□□□ 0.02
PACS1-210ENST00000529795 ADCY3O60266 1144 aa15.15■□□□□ 0.02
PACS1-210ENST00000529795 CTGFP29279 349 aa15.15■□□□□ 0.02
PACS1-210ENST00000529795 FLT3LGP49771 235 aa15.15■□□□□ 0.02
PACS1-210ENST00000529795 ERVK-9P63128 1117 aa15.15■□□□□ 0.02
PACS1-210ENST00000529795 ERVK-24P63145 666 aa15.15■□□□□ 0.02
PACS1-210ENST00000529795 SOCS4Q8WXH5 440 aa15.15■□□□□ 0.02
PACS1-210ENST00000529795 NUDT12Q9BQG2 462 aa15.15■□□□□ 0.02
PACS1-210ENST00000529795 RPAP3Q9H6T3 665 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms