RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 ATP5JP18859 108 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 DAAM2Q86T65 1068 aa9.04□□□□□ -0.96
CTNND1-220ENST00000529526 SMCO2A6NFE2 343 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 GYG1P46976 350 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 SNX16P57768 344 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 GEN1Q17RS7 908 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 ZNF365Q70YC5 407 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 TMEM63CQ9P1W3 806 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 ATP7AQ04656 1500 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 ZBED4O75132 1171 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 GAS8O95995 478 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 TPD52P55327 224 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-220ENST00000529526 KLHL30Q0D2K2 578 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 KIAA1524Q8TCG1 905 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 CDCA7Q9BWT1 371 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-220ENST00000529526 NLRC4Q9NPP4 1024 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 USP40Q9NVE5 1235 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 PALD1Q9ULE6 856 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 NR1I2O75469 434 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 BCAMP50895 628 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 GTF2IP78347 998 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 SFMBT2Q5VUG0 894 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 TTLL7Q6ZT98 887 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 RRAGAQ7L523 313 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 SMC1BQ8NDV3 1235 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 TRIM6Q9C030 488 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-220ENST00000529526 XPO4Q9C0E2 1151 aaKnown RBP9.03□□□□□ -0.96
CTNND1-220ENST00000529526 IMPACTQ9P2X3 320 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 CRCPO75575 148 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 PFKFB1P16118 471 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 MAGEA1P43355 309 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 BLMP54132 1417 aaPredicted RBP9.03□□□□□ -0.96
CTNND1-220ENST00000529526 ZNF445P59923 1031 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 IFT20Q8IY31 132 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 ZNF654Q8IZM8 581 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 LSM14BQ9BX40 385 aaKnown RBP9.03□□□□□ -0.96
CTNND1-220ENST00000529526 CSRNP2Q9H175 543 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 ASIC3Q9UHC3 531 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 NOD1Q9Y239 953 aa9.03□□□□□ -0.96
CTNND1-220ENST00000529526 GOLGA8HP0CJ92 632 aa9.02□□□□□ -0.96
CTNND1-220ENST00000529526 ALDH3A1P30838 453 aa9.02□□□□□ -0.96
CTNND1-220ENST00000529526 TECP42680 631 aa9.02□□□□□ -0.96
CTNND1-220ENST00000529526 PTPROQ16827 1216 aa9.02□□□□□ -0.96
CTNND1-220ENST00000529526 LRRC24Q50LG9 513 aa9.02□□□□□ -0.96
CTNND1-220ENST00000529526 GDAP1L1Q96MZ0 367 aa9.02□□□□□ -0.96
CTNND1-220ENST00000529526 ZSCAN10Q96SZ4 725 aaPredicted RBP9.02□□□□□ -0.96
CTNND1-220ENST00000529526 TPCN1Q9ULQ1 816 aa9.02□□□□□ -0.96
CTNND1-220ENST00000529526 KDRP35968 1356 aa9.02□□□□□ -0.96
CTNND1-220ENST00000529526 GOLGA6CA6NDK9 693 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 USP17L12C9JPN9 530 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 USP17L21D6R901 530 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
CTNND1-220ENST00000529526 GOLGA6DP0CG33 693 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 ATP5DP30049 168 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 SLC8A3P57103 927 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 GOLGA6AQ9NYA3 693 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 TCIRG1Q13488 830 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 TMTC1Q8IUR5 882 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 REXO1Q8N1G1 1221 aaKnown RBP9.02□□□□□ -0.97
CTNND1-220ENST00000529526 GPKOWQ92917 476 aaPredicted RBP eCLIP9.02□□□□□ -0.97
CTNND1-220ENST00000529526 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
CTNND1-220ENST00000529526 KDM5AP29375 1690 aaKnown RBP9.02□□□□□ -0.97
CTNND1-220ENST00000529526 SH3BP5O60239 455 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 HSPA1LP34931 641 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 IFNL3Q8IZI9 196 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 LZTS2Q9BRK4 669 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 AZI2Q9H6S1 392 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 PCDHB13Q9Y5F0 798 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 ABCC4O15439 1325 aa9.02□□□□□ -0.97
CTNND1-220ENST00000529526 CYP2J2P51589 502 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 PKP1Q13835 747 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 DCUN1D2Q6PH85 259 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 LRRC47Q8N1G4 583 aaKnown RBP9.01□□□□□ -0.97
CTNND1-220ENST00000529526 IL17REQ8NFR9 667 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 CHAMP1Q96JM3 812 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 USP44Q9H0E7 712 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 GLT8D2Q9H1C3 349 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 ARPP21Q9UBL0 812 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-220ENST00000529526 PTPRTO14522 1441 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 COBLO75128 1261 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 SCNN1DP51172 638 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 CLUL1Q15846 466 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 EAF2Q96CJ1 260 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-220ENST00000529526 GPHNQ9NQX3 736 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-220ENST00000529526 GIGYF1O75420 1035 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-220ENST00000529526 TUBBP07437 444 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 CD19P15391 556 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 PPP2R5CQ13362 524 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 ZNF827Q17R98 1081 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 MFSD14BQ5SR56 506 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 CEP85LQ5SZL2 805 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 FAM102BQ5T8I3 360 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 MYSM1Q5VVJ2 828 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 C2CD5Q86YS7 1000 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 CLIC6Q96NY7 704 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.01□□□□□ -0.975e-6■■■□□ 17.3
CTNND1-220ENST00000529526 ARHGAP6O43182 974 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 BRD1O95696 1058 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 ITIH3Q06033 890 aa9.01□□□□□ -0.97
CTNND1-220ENST00000529526 GPBP1Q86WP2 473 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms