RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 MFSD2AQ8NA29 543 aa7.53□□□□□ -1.2
CTR9-204ENST00000529355 DNAJB8Q8NHS0 232 aa7.53□□□□□ -1.2
CTR9-204ENST00000529355 SHDQ96IW2 340 aa7.53□□□□□ -1.2
CTR9-204ENST00000529355 SLC9A7Q96T83 725 aa7.53□□□□□ -1.2
CTR9-204ENST00000529355 OSBPL1AQ9BXW6 950 aa7.53□□□□□ -1.2
CTR9-204ENST00000529355 GMIPQ9P107 970 aa7.53□□□□□ -1.2
CTR9-204ENST00000529355 COL17A1Q9UMD9 1497 aaPredicted RBP7.52□□□□□ -1.21
CTR9-204ENST00000529355 LRRN2O75325 713 aa7.52□□□□□ -1.21
CTR9-204ENST00000529355 UBOX5O94941 541 aa7.52□□□□□ -1.21
CTR9-204ENST00000529355 NME1P15531 152 aaKnown RBP7.52□□□□□ -1.21
CTR9-204ENST00000529355 ZC3H6P61129 1189 aaKnown RBP7.52□□□□□ -1.21
CTR9-204ENST00000529355 ZYXQ15942 572 aaKnown RBP7.52□□□□□ -1.21
CTR9-204ENST00000529355 SLFN12Q8IYM2 578 aa7.52□□□□□ -1.21
CTR9-204ENST00000529355 PHACTR4Q8IZ21 702 aa7.52□□□□□ -1.21
CTR9-204ENST00000529355 TMEM40Q8WWA1 233 aa7.52□□□□□ -1.21
CTR9-204ENST00000529355 CNNM2Q9H8M5 875 aa7.52□□□□□ -1.21
CTR9-204ENST00000529355 ATG3Q9NT62 314 aa7.52□□□□□ -1.21
CTR9-204ENST00000529355 FGRP09769 529 aa7.51□□□□□ -1.21
CTR9-204ENST00000529355 ETFBP38117 255 aa7.51□□□□□ -1.21
CTR9-204ENST00000529355 CDCP2Q5VXM1 449 aa7.51□□□□□ -1.21
CTR9-204ENST00000529355 NLRC3Q7RTR2 1065 aa7.51□□□□□ -1.21
CTR9-204ENST00000529355 ANAPC16Q96DE5 110 aa7.51□□□□□ -1.21
CTR9-204ENST00000529355 SEC16BQ96JE7 1060 aa7.51□□□□□ -1.21
CTR9-204ENST00000529355 SRRTQ9BXP5 876 aaKnown RBP7.51□□□□□ -1.21
CTR9-204ENST00000529355 MEIS3P2A8K0S8 358 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 GSC2O15499 205 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 HYAL3O43820 417 aaPredicted RBP7.5□□□□□ -1.21
CTR9-204ENST00000529355 GIPRP48546 466 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 YARSP54577 528 aaKnown RBP7.5□□□□□ -1.21
CTR9-204ENST00000529355 ARID5AQ03989 594 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 FZD5Q13467 585 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 DUSP27Q5VZP5 1158 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 TMEM192Q8IY95 271 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 SLC43A3Q8NBI5 491 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 CYB5D2Q8WUJ1 264 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 ZNF512BQ96KM6 892 aaPredicted RBP7.5□□□□□ -1.21
CTR9-204ENST00000529355 PIM2Q9P1W9 311 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 ZC3H7BQ9UGR2 993 aaKnown RBP7.5□□□□□ -1.21
CTR9-204ENST00000529355 TPX2Q9ULW0 747 aaKnown RBP7.5□□□□□ -1.21
CTR9-204ENST00000529355 PLAGL2Q9UPG8 496 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 CEP131Q9UPN4 1083 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 LEMD3Q9Y2U8 911 aa7.5□□□□□ -1.21
CTR9-204ENST00000529355 RGS13O14921 159 aa7.49□□□□□ -1.21
CTR9-204ENST00000529355 CBX7O95931 251 aa7.49□□□□□ -1.21
CTR9-204ENST00000529355 RAG1P15918 1043 aa7.49□□□□□ -1.21
CTR9-204ENST00000529355 SSTR4P31391 388 aa7.49□□□□□ -1.21
CTR9-204ENST00000529355 OXCT1P55809 520 aa7.49□□□□□ -1.21
CTR9-204ENST00000529355 EIF6P56537 245 aaKnown RBP7.49□□□□□ -1.21
CTR9-204ENST00000529355 COL9A2Q14055 689 aaPredicted RBP7.49□□□□□ -1.21
CTR9-204ENST00000529355 PLD6Q8N2A8 252 aaKnown RBP7.49□□□□□ -1.21
CTR9-204ENST00000529355 RBBP8NLQ8NC74 664 aaPredicted RBP7.49□□□□□ -1.21
CTR9-204ENST00000529355 CPLX3Q8WVH0 158 aa7.49□□□□□ -1.21
CTR9-204ENST00000529355 CCDC74BQ96LY2 380 aa7.49□□□□□ -1.21
CTR9-204ENST00000529355 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTR9-204ENST00000529355 TNKS2Q9H2K2 1166 aa7.49□□□□□ -1.21
CTR9-204ENST00000529355 CYP26A1O43174 497 aa7.48□□□□□ -1.21
CTR9-204ENST00000529355 ITIH2P19823 946 aa7.48□□□□□ -1.21
CTR9-204ENST00000529355 CYP27C1Q4G0S4 372 aa7.48□□□□□ -1.21
CTR9-204ENST00000529355 SPATA32Q96LK8 384 aa7.48□□□□□ -1.21
CTR9-204ENST00000529355 Q96M66 194 aa7.48□□□□□ -1.21
CTR9-204ENST00000529355 FMNL2Q96PY5 1086 aa7.48□□□□□ -1.21
CTR9-204ENST00000529355 GMLQ99445 158 aa7.48□□□□□ -1.21
CTR9-204ENST00000529355 LTBP3Q9NS15 1303 aa7.48□□□□□ -1.21
CTR9-204ENST00000529355 WASH4PA8MWX3 477 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 TNFRSF10CO14798 259 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 ADAMTS4O75173 837 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 FOSL1P15407 271 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 GBP1P32455 592 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 GNL2Q13823 731 aaKnown RBP7.47□□□□□ -1.21
CTR9-204ENST00000529355 UNC5AQ6ZN44 842 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 VPS37DQ86XT2 251 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 GIMAP7Q8NHV1 300 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 VWCEQ96DN2 955 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 C8orf37Q96NL8 207 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 ZNF408Q9H9D4 720 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 PRDM5Q9NQX1 630 aaPredicted RBP7.47□□□□□ -1.21
CTR9-204ENST00000529355 FAM86C1Q9NVL1 165 aa7.47□□□□□ -1.21
CTR9-204ENST00000529355 CD96P40200 585 aa7.46□□□□□ -1.22
CTR9-204ENST00000529355 CYP27A1Q02318 531 aa7.46□□□□□ -1.22
CTR9-204ENST00000529355 MLECQ14165 292 aa7.46□□□□□ -1.22
CTR9-204ENST00000529355 NKPD1Q17RQ9 610 aa7.46□□□□□ -1.22
CTR9-204ENST00000529355 LRRFIP1Q32MZ4 808 aaKnown RBP7.46□□□□□ -1.22
CTR9-204ENST00000529355 KREMEN1Q96MU8 473 aa7.46□□□□□ -1.22
CTR9-204ENST00000529355 CRBNQ96SW2 442 aa7.46□□□□□ -1.22
CTR9-204ENST00000529355 RNF112Q9ULX5 631 aa7.46□□□□□ -1.22
CTR9-204ENST00000529355 PCDHB10Q9UN67 800 aa7.46□□□□□ -1.22
CTR9-204ENST00000529355 A0A1W2PQH9 124 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 C9IYK1 514 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 SMAD7O15105 426 aaKnown RBP7.45□□□□□ -1.22
CTR9-204ENST00000529355 SSBP05455 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
CTR9-204ENST00000529355 IMPDH2P12268 514 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 GUCY2CP25092 1073 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 PPP2R5EQ16537 467 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 MSMPQ1L6U9 139 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 SFRP5Q5T4F7 317 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 TTC6Q86TZ1 520 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 SLC51AQ86UW1 340 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 PPFIBP1Q86W92 1011 aa7.45□□□□□ -1.22
CTR9-204ENST00000529355 DHX38Q92620 1227 aaKnown RBP7.45□□□□□ -1.22
CTR9-204ENST00000529355 SLC6A18Q96N87 628 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms