RNA–Protein interactions for RNA: ENST00000529251.1

TCN1-202, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-202ENST00000529251 MRVI1Q9Y6F6 885 aa6.18□□□□□ -1.42
TCN1-202ENST00000529251 UPK3BL1B0FP48 263 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 UPK3BL2E5RIL1 263 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 IGSF3O75054 1194 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 PAPLNO95428 1278 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 ITIH2P19823 946 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 NASPP49321 788 aaPredicted RBP6.17□□□□□ -1.42
TCN1-202ENST00000529251 RPL6Q02878 288 aaKnown RBP6.17□□□□□ -1.42
TCN1-202ENST00000529251 NKPD1Q17RQ9 610 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 ARHGAP27Q6ZUM4 889 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 REC114Q7Z4M0 266 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 DPH2Q9BQC3 489 aaPredicted RBP6.17□□□□□ -1.42
TCN1-202ENST00000529251 NT5C1AQ9BXI3 368 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 MBNL3Q9NUK0 354 aaKnown RBP6.17□□□□□ -1.42
TCN1-202ENST00000529251 SNX11Q9Y5W9 270 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 CNTNAP4Q9C0A0 1308 aa6.17□□□□□ -1.42
TCN1-202ENST00000529251 JUNBP17275 347 aaPredicted RBP6.16□□□□□ -1.42
TCN1-202ENST00000529251 GRK4P32298 578 aa6.16□□□□□ -1.42
TCN1-202ENST00000529251 GJA8P48165 433 aa6.16□□□□□ -1.42
TCN1-202ENST00000529251 RUFY4Q6ZNE9 571 aa6.16□□□□□ -1.42
TCN1-202ENST00000529251 FOXQ1Q9C009 403 aa6.16□□□□□ -1.42
TCN1-202ENST00000529251 MAPK8IP1Q9UQF2 711 aa6.16□□□□□ -1.42
TCN1-202ENST00000529251 PCDHB14Q9Y5E9 798 aa6.16□□□□□ -1.42
TCN1-202ENST00000529251 FAM86C2PA6NEL3 165 aa6.15□□□□□ -1.42
TCN1-202ENST00000529251 BPNT1O95861 308 aa6.15□□□□□ -1.42
TCN1-202ENST00000529251 RNASE1P07998 156 aaKnown RBP6.15□□□□□ -1.42
TCN1-202ENST00000529251 ATF4P18848 351 aaPredicted RBP6.15□□□□□ -1.42
TCN1-202ENST00000529251 ETF1P62495 437 aaKnown RBP6.15□□□□□ -1.42
TCN1-202ENST00000529251 MPP2Q14168 576 aa6.15□□□□□ -1.42
TCN1-202ENST00000529251 FBXW10Q5XX13 1052 aa6.15□□□□□ -1.42
TCN1-202ENST00000529251 C22orf34Q6ZV56 151 aa6.15□□□□□ -1.42
TCN1-202ENST00000529251 MCF2L2Q86YR7 1114 aa6.15□□□□□ -1.42
TCN1-202ENST00000529251 SLITRK4Q8IW52 837 aa6.15□□□□□ -1.42
TCN1-202ENST00000529251 DHX38Q92620 1227 aaKnown RBP6.15□□□□□ -1.42
TCN1-202ENST00000529251 PRDM5Q9NQX1 630 aaPredicted RBP6.15□□□□□ -1.42
TCN1-202ENST00000529251 TACC3Q9Y6A5 838 aa6.15□□□□□ -1.42
TCN1-202ENST00000529251 CHURC1-FNTBB4DL54 471 aa6.14□□□□□ -1.43
TCN1-202ENST00000529251 ANGEL2Q5VTE6 544 aaKnown RBP6.14□□□□□ -1.43
TCN1-202ENST00000529251 HID1Q8IV36 788 aa6.14□□□□□ -1.43
TCN1-202ENST00000529251 XAGE3Q8WTP9 111 aa6.14□□□□□ -1.43
TCN1-202ENST00000529251 ASIC4Q96FT7 647 aa6.14□□□□□ -1.43
TCN1-202ENST00000529251 KLHL3Q9UH77 587 aa6.14□□□□□ -1.43
TCN1-202ENST00000529251 PRR33A8MZF0 331 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 HTR3BO95264 441 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 CST3P01034 146 aaPredicted RBP6.13□□□□□ -1.43
TCN1-202ENST00000529251 PGRP06401 933 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 ZNF865P0CJ78 1059 aaPredicted RBP6.13□□□□□ -1.43
TCN1-202ENST00000529251 PLCG1P19174 1290 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 ETFBP38117 255 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 CLCN7P51798 805 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 PRAMEF13Q5VWM6 474 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 ATG4DQ86TL0 474 aaPredicted RBP6.13□□□□□ -1.43
TCN1-202ENST00000529251 FAM169BQ8N8A8 192 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 MFSD2AQ8NA29 543 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 LRRN4CLQ8ND94 238 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 RIN3Q8TB24 985 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 RASGRP4Q8TDF6 673 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 ACSF2Q96CM8 615 aaPredicted RBP6.13□□□□□ -1.43
TCN1-202ENST00000529251 MIPEPQ99797 713 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 TANGO6Q9C0B7 1094 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 RC3H2Q9HBD1 1191 aaKnown RBP6.13□□□□□ -1.43
TCN1-202ENST00000529251 USP35Q9P2H5 1018 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 REV1Q9UBZ9 1251 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 PITPNM2Q9BZ72 1349 aa6.13□□□□□ -1.43
TCN1-202ENST00000529251 GNAT3A8MTJ3 354 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 ABCC9O60706 1549 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 FGRP09769 529 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 CWF19L2Q2TBE0 894 aaKnown RBP6.12□□□□□ -1.43
TCN1-202ENST00000529251 CARMIL2Q6F5E8 1435 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 LETMD1Q6P1Q0 360 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 SLC23A3Q6PIS1 610 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 CCDC84Q86UT8 332 aaPredicted RBP6.12□□□□□ -1.43
TCN1-202ENST00000529251 MRPL41Q8IXM3 137 aaKnown RBP6.12□□□□□ -1.43
TCN1-202ENST00000529251 PI4K2BQ8TCG2 481 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 ASB11Q8WXH4 323 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 ANAPC16Q96DE5 110 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 C8orf37Q96NL8 207 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.12□□□□□ -1.43
TCN1-202ENST00000529251 LRRC3Q9BY71 257 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 TJP2Q9UDY2 1190 aa6.12□□□□□ -1.43
TCN1-202ENST00000529251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.12□□□□□ -1.43
TCN1-202ENST00000529251 POLR2BP30876 1174 aaKnown RBP6.11□□□□□ -1.43
TCN1-202ENST00000529251 ARID5AQ03989 594 aa6.11□□□□□ -1.43
TCN1-202ENST00000529251 IKZF1Q13422 519 aa6.11□□□□□ -1.43
TCN1-202ENST00000529251 OGFOD2Q6N063 350 aa6.11□□□□□ -1.43
TCN1-202ENST00000529251 PRDM7Q9NQW5 492 aa6.11□□□□□ -1.43
TCN1-202ENST00000529251 SEMA3GQ9NS98 782 aa6.11□□□□□ -1.43
TCN1-202ENST00000529251 CAPN6Q9Y6Q1 641 aa6.11□□□□□ -1.43
TCN1-202ENST00000529251 BIN1O00499 593 aa6.1□□□□□ -1.43
TCN1-202ENST00000529251 GTF2F1P35269 517 aaKnown RBP eCLIP6.1□□□□□ -1.43
TCN1-202ENST00000529251 SOX9P48436 509 aa6.1□□□□□ -1.43
TCN1-202ENST00000529251 SFRP5Q5T4F7 317 aa6.1□□□□□ -1.43
TCN1-202ENST00000529251 MFSD4AQ8N468 514 aa6.1□□□□□ -1.43
TCN1-202ENST00000529251 POU5F2Q8N7G0 328 aa6.1□□□□□ -1.43
TCN1-202ENST00000529251 SLC43A3Q8NBI5 491 aa6.1□□□□□ -1.43
TCN1-202ENST00000529251 FERD3LQ96RJ6 166 aa6.1□□□□□ -1.43
TCN1-202ENST00000529251 TPX2Q9ULW0 747 aaKnown RBP6.1□□□□□ -1.43
TCN1-202ENST00000529251 ST14Q9Y5Y6 855 aa6.1□□□□□ -1.43
TCN1-202ENST00000529251 ROBO2Q9HCK4 1378 aa6.09□□□□□ -1.43
TCN1-202ENST00000529251 SLC22A31A6NKX4 558 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms