RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	USP17L22	D6RA61	530 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	USP17L17	D6RBQ6	530 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	USP17L19	D6RCP7	530 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	USP17L20	D6RJB6	530 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	IGSF3	O75054	1194 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	USP17L24	Q0WX57	530 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CERKL	Q49MI3	558 aa	Predicted RBP	13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	WDR78	Q5VTH9	848 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	TATDN1	Q6P1N9	297 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	FTSJ3	Q8IY81	847 aa	Known RBP	13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	EDC3	Q96F86	508 aa	Known RBP	13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	ANTXR1	Q9H6X2	564 aa		13.86	□□□□□ -0.19
PTP4A2-211	ENST00000528840	MAGEA10	P43363	369 aa	Predicted RBP	13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	MAP3K12	Q12852	859 aa		13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	ABCB5	Q2M3G0	1257 aa		13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	LHX8	Q68G74	356 aa		13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CATSPERG	Q6ZRH7	1159 aa		13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	TTC6	Q86TZ1	520 aa		13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	ACER1	Q8TDN7	264 aa		13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CABP5	Q9NP86	173 aa		13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	SERPINB13	Q9UIV8	391 aa		13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	RABGAP1	Q9Y3P9	1069 aa		13.85	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CNMD	O75829	334 aa		13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	GLRX3	O76003	335 aa	Known RBP	13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	POLR3D	P05423	398 aa	Predicted RBP	13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	RLBP1	P12271	317 aa		13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	PLCD1	P51178	756 aa		13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CCNA1	P78396	465 aa		13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	MAP2K5	Q13163	448 aa		13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	CERS3	Q8IU89	383 aa		13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	UBE2O	Q9C0C9	1292 aa	Known RBP	13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	PLXNB2	O15031	1838 aa		13.84	□□□□□ -0.19
PTP4A2-211	ENST00000528840	SIPA1L1	O43166	1804 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	DLL1	O00548	723 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	PTPRE	P23469	700 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	USP14	P54578	494 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	ATP2B2	Q01814	1243 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	MFSD14C	Q5VZR4	134 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	AACS	Q86V21	672 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	C12orf42	Q96LP6	360 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	KIAA1683	Q9H0B3	1180 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	BCL11A	Q9H165	835 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	EHD4	Q9H223	541 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	FLRT1	Q9NZU1	646 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	EXOC6B	Q9Y2D4	811 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	PFAS	O15067	1338 aa		13.83	□□□□□ -0.2
PTP4A2-211	ENST00000528840	SZT2	Q5T011	3432 aa		13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	MAGEB6P1	A0A0J9YX57	407 aa		13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	COL6A1	P12109	1028 aa		13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	CNGA1	P29973	690 aa		13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	LRRC26	Q2I0M4	334 aa		13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	DEFB123	Q8N688	67 aa		13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	APBA2	Q99767	749 aa		13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	BTBD7	Q9P203	1132 aa		13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	ALPK3	Q96L96	1907 aa		13.82	□□□□□ -0.2
PTP4A2-211	ENST00000528840	SLC15A5	A6NIM6	579 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	MPHOSPH10	O00566	681 aa	Known RBP	13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	VCAM1	P19320	739 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	GUCY1A2	P33402	732 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	SHMT1	P34896	483 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	MDM2	Q00987	491 aa	Predicted RBP	13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	SEPT2	Q15019	361 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	CEP85	Q6P2H3	762 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840		Q7L0L9	218 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	ERC1	Q8IUD2	1116 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	TDH	Q8IZJ6	230 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	IL1RAPL2	Q9NP60	686 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	IVNS1ABP	Q9Y6Y0	642 aa		13.81	□□□□□ -0.2
PTP4A2-211	ENST00000528840	CDK5RAP2	Q96SN8	1893 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	CYP2C19	P33261	490 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	COG2	Q14746	738 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	LRIT3	Q3SXY7	679 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	SLC9C2	Q5TAH2	1124 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	GPR153	Q6NV75	609 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	NPLOC4	Q8TAT6	608 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	PANK1	Q8TE04	598 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	RIOK1	Q9BRS2	568 aa	Known RBP	13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	MCM9	Q9NXL9	1143 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	HOXC10	Q9NYD6	342 aa		13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	DDX60L	Q5H9U9	1706 aa	Known RBP	13.8	□□□□□ -0.2
PTP4A2-211	ENST00000528840	APBB1	O00213	710 aa		13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840	EVX2	Q03828	476 aa		13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840	TTF1	Q15361	905 aa	Predicted RBP	13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840	TMED8	Q6PL24	325 aa	Predicted RBP	13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840	LBX2	Q6XYB7	198 aa		13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840	DPP9	Q86TI2	863 aa		13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840	RHPN1	Q8TCX5	695 aa		13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840	DDX20	Q9UHI6	824 aa	Known RBP	13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840	MYH1	P12882	1939 aa		13.79	□□□□□ -0.2
PTP4A2-211	ENST00000528840		A0A1W2PRG0	241 aa		13.78	□□□□□ -0.2
PTP4A2-211	ENST00000528840	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.78	□□□□□ -0.2
PTP4A2-211	ENST00000528840	GOLIM4	O00461	696 aa		13.78	□□□□□ -0.2
PTP4A2-211	ENST00000528840	PDE6A	P16499	860 aa		13.78	□□□□□ -0.2
PTP4A2-211	ENST00000528840	ATN1	P54259	1190 aa	Predicted RBP	13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms