RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 CCAR1Q8IX12 1150 aaKnown RBP27.82■■■□□ 2.04
PKP3-206ENST00000528036 PCDHB15Q9Y5E8 787 aa27.82■■■□□ 2.04
PKP3-206ENST00000528036 SLC4A4Q9Y6R1 1079 aa27.82■■■□□ 2.04
PKP3-206ENST00000528036 ZSWIM8A7E2V4 1837 aa27.81■■■□□ 2.04
PKP3-206ENST00000528036 MYCP01106 439 aaPredicted RBP27.81■■■□□ 2.04
PKP3-206ENST00000528036 CCNA1P78396 465 aa27.81■■■□□ 2.04
PKP3-206ENST00000528036 MTFR1Q15390 333 aa27.81■■■□□ 2.04
PKP3-206ENST00000528036 C12orf60Q5U649 245 aa27.81■■■□□ 2.04
PKP3-206ENST00000528036 SOCS4Q8WXH5 440 aa27.81■■■□□ 2.04
PKP3-206ENST00000528036 SH2D4AQ9H788 454 aa27.81■■■□□ 2.04
PKP3-206ENST00000528036 RABGAP1Q9Y3P9 1069 aa27.81■■■□□ 2.04
PKP3-206ENST00000528036 TNRC18O15417 2968 aaPredicted RBP27.8■■■□□ 2.04
PKP3-206ENST00000528036 MPHOSPH10O00566 681 aaKnown RBP27.8■■■□□ 2.04
PKP3-206ENST00000528036 CATSPERGQ6ZRH7 1159 aa27.8■■■□□ 2.04
PKP3-206ENST00000528036 TRMT44Q8IYL2 757 aaKnown RBP27.8■■■□□ 2.04
PKP3-206ENST00000528036 GCC1Q96CN9 775 aa27.8■■■□□ 2.04
PKP3-206ENST00000528036 ARPP21Q9UBL0 812 aaPredicted RBP27.8■■■□□ 2.04
PKP3-206ENST00000528036 MGAMO43451 1857 aa27.79■■■□□ 2.04
PKP3-206ENST00000528036 GLRX3O76003 335 aaKnown RBP27.79■■■□□ 2.04
PKP3-206ENST00000528036 ERVK-9P63128 1117 aa27.79■■■□□ 2.04
PKP3-206ENST00000528036 ERVK-24P63145 666 aa27.79■■■□□ 2.04
PKP3-206ENST00000528036 SEPT2Q15019 361 aa27.79■■■□□ 2.04
PKP3-206ENST00000528036 LBX2Q6XYB7 198 aa27.79■■■□□ 2.04
PKP3-206ENST00000528036 APPBP2Q92624 585 aa27.79■■■□□ 2.04
PKP3-206ENST00000528036 RBPJLQ9UBG7 517 aa27.79■■■□□ 2.04
PKP3-206ENST00000528036 GJD2Q9UKL4 321 aa27.79■■■□□ 2.04
PKP3-206ENST00000528036 DDX60LQ5H9U9 1706 aaKnown RBP27.78■■■□□ 2.04
PKP3-206ENST00000528036 USP17L12C9JPN9 530 aa27.78■■■□□ 2.04
PKP3-206ENST00000528036 USP17L21D6R901 530 aa27.78■■■□□ 2.04
PKP3-206ENST00000528036 RNF113AO15541 343 aaKnown RBP27.78■■■□□ 2.04
PKP3-206ENST00000528036 PRKAB2O43741 272 aa27.78■■■□□ 2.04
PKP3-206ENST00000528036 INHAP05111 366 aa27.78■■■□□ 2.04
PKP3-206ENST00000528036 GNAT2P19087 354 aa27.78■■■□□ 2.04
PKP3-206ENST00000528036 VCAM1P19320 739 aa27.78■■■□□ 2.04
PKP3-206ENST00000528036 GUCY1A2P33402 732 aa27.78■■■□□ 2.04
PKP3-206ENST00000528036 NUDT12Q9BQG2 462 aa27.78■■■□□ 2.04
PKP3-206ENST00000528036 PUS7LQ9H0K6 701 aaKnown RBP27.78■■■□□ 2.04
PKP3-206ENST00000528036 ARHGEF10LQ9HCE6 1279 aa27.78■■■□□ 2.04
PKP3-206ENST00000528036 NAV1Q8NEY1 1877 aa27.77■■■□□ 2.04
PKP3-206ENST00000528036 XRCC5P13010 732 aaKnown RBP27.77■■■□□ 2.04
PKP3-206ENST00000528036 ZYXQ15942 572 aaKnown RBP27.77■■■□□ 2.04
PKP3-206ENST00000528036 C16orf86Q6ZW13 317 aa27.77■■■□□ 2.04
PKP3-206ENST00000528036 ACER1Q8TDN7 264 aa27.77■■■□□ 2.04
PKP3-206ENST00000528036 LPAR1Q92633 364 aa27.77■■■□□ 2.04
PKP3-206ENST00000528036 STRBPQ96SI9 672 aaKnown RBP27.77■■■□□ 2.04
PKP3-206ENST00000528036 CENPFP49454 3210 aa27.76■■■□□ 2.03
PKP3-206ENST00000528036 HMGCRP04035 888 aa27.76■■■□□ 2.03
PKP3-206ENST00000528036 ELNP15502 786 aa27.76■■■□□ 2.03
PKP3-206ENST00000528036 CDK8P49336 464 aa27.76■■■□□ 2.03
PKP3-206ENST00000528036 SBK1Q52WX2 424 aa27.76■■■□□ 2.03
PKP3-206ENST00000528036 TXNRD2Q9NNW7 524 aa27.76■■■□□ 2.03
PKP3-206ENST00000528036 HOXC10Q9NYD6 342 aa27.76■■■□□ 2.03
PKP3-206ENST00000528036 SGPL1O95470 568 aa27.75■■■□□ 2.03
PKP3-206ENST00000528036 CYP2D6P10635 497 aa27.75■■■□□ 2.03
PKP3-206ENST00000528036 ZNF287Q9HBT7 754 aa27.75■■■□□ 2.03
PKP3-206ENST00000528036 CWC22Q9HCG8 908 aaKnown RBP27.75■■■□□ 2.03
PKP3-206ENST00000528036 SLFNL1Q499Z3 407 aa27.74■■■□□ 2.03
PKP3-206ENST00000528036 CTR9Q6PD62 1173 aa27.74■■■□□ 2.03
PKP3-206ENST00000528036 U2AF1L4Q8WU68 220 aaKnown RBP27.74■■■□□ 2.03
PKP3-206ENST00000528036 PAGR1Q9BTK6 254 aa27.74■■■□□ 2.03
PKP3-206ENST00000528036 UNC93B1Q9H1C4 597 aa27.74■■■□□ 2.03
PKP3-206ENST00000528036 RPAP3Q9H6T3 665 aaPredicted RBP27.74■■■□□ 2.03
PKP3-206ENST00000528036 ICA1Q05084 483 aa27.73■■■□□ 2.03
PKP3-206ENST00000528036 HDAC1Q13547 482 aaPredicted RBP27.73■■■□□ 2.03
PKP3-206ENST00000528036 COG2Q14746 738 aa27.73■■■□□ 2.03
PKP3-206ENST00000528036 PLEKHH3Q7Z736 793 aa27.73■■■□□ 2.03
PKP3-206ENST00000528036 DYNLL2Q96FJ2 89 aa27.73■■■□□ 2.03
PKP3-206ENST00000528036 KANSL2Q9H9L4 492 aa27.73■■■□□ 2.03
PKP3-206ENST00000528036 MX1P20591 662 aa27.72■■■□□ 2.03
PKP3-206ENST00000528036 SLC44A5Q8NCS7 719 aa27.72■■■□□ 2.03
PKP3-206ENST00000528036 CRBNQ96SW2 442 aa27.72■■■□□ 2.03
PKP3-206ENST00000528036 HTATIP2Q9BUP3 242 aa27.72■■■□□ 2.03
PKP3-206ENST00000528036 PAK6Q9NQU5 681 aaPredicted RBP27.72■■■□□ 2.03
PKP3-206ENST00000528036 TMX2Q9Y320 296 aa27.72■■■□□ 2.03
PKP3-206ENST00000528036 RGS2P41220 211 aa27.71■■■□□ 2.03
PKP3-206ENST00000528036 Q3C1V9 767 aa27.71■■■□□ 2.03
PKP3-206ENST00000528036 TICAM2Q86XR7 235 aa27.71■■■□□ 2.03
PKP3-206ENST00000528036 MB21D1Q8N884 522 aa27.71■■■□□ 2.03
PKP3-206ENST00000528036 OSBP2Q969R2 916 aa27.71■■■□□ 2.03
PKP3-206ENST00000528036 SHISA4Q96DD7 197 aa27.71■■■□□ 2.03
PKP3-206ENST00000528036 NACAP1Q9BZK3 213 aa27.71■■■□□ 2.03
PKP3-206ENST00000528036 RPTORQ8N122 1335 aa27.7■■■□□ 2.03
PKP3-206ENST00000528036 A0A1W2PRG0 241 aa27.7■■■□□ 2.02
PKP3-206ENST00000528036 AKR1B1P15121 316 aa27.7■■■□□ 2.02
PKP3-206ENST00000528036 GPR142Q7Z601 462 aa27.7■■■□□ 2.02
PKP3-206ENST00000528036 PI4K2BQ8TCG2 481 aa27.7■■■□□ 2.02
PKP3-206ENST00000528036 HMX1Q9NP08 348 aaPredicted RBP27.7■■■□□ 2.02
PKP3-206ENST00000528036 GSG1L2A8MUP6 293 aa27.69■■■□□ 2.02
PKP3-206ENST00000528036 GPAA1O43292 621 aa27.69■■■□□ 2.02
PKP3-206ENST00000528036 TFRCP02786 760 aaKnown RBP27.69■■■□□ 2.02
PKP3-206ENST00000528036 CHGBP05060 677 aa27.69■■■□□ 2.02
PKP3-206ENST00000528036 TSHZ3Q63HK5 1081 aa27.69■■■□□ 2.02
PKP3-206ENST00000528036 VCPKMTQ9H867 229 aa27.69■■■□□ 2.02
PKP3-206ENST00000528036 MYH7P12883 1935 aa27.69■■■□□ 2.02
PKP3-206ENST00000528036 SPDYE16A6NNV3 312 aaPredicted RBP27.68■■■□□ 2.02
PKP3-206ENST00000528036 CYP2B6P20813 491 aa27.68■■■□□ 2.02
PKP3-206ENST00000528036 EVX2Q03828 476 aa27.68■■■□□ 2.02
PKP3-206ENST00000528036 MORN1Q5T089 497 aa27.68■■■□□ 2.02
PKP3-206ENST00000528036 ANKRD45Q5TZF3 282 aa27.68■■■□□ 2.02
PKP3-206ENST00000528036 USP6NLQ92738 828 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms