RNA–Protein interactions for RNA: ENST00000527952.1

PTPRJ-205, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 5

Gene PTPRJ, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-205ENST00000527952 CERS3Q8IU89 383 aa29.19■■■□□ 2.26
PTPRJ-205ENST00000527952 SOCS4Q8WXH5 440 aa29.19■■■□□ 2.26
PTPRJ-205ENST00000527952 DNAJC2Q99543 621 aaKnown RBP29.19■■■□□ 2.26
PTPRJ-205ENST00000527952 CWC22Q9HCG8 908 aaKnown RBP29.19■■■□□ 2.26
PTPRJ-205ENST00000527952 USP17L15C9J2P7 530 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 USP17L13C9JLJ4 530 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 USP17L11C9JVI0 530 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 USP17L18D6R9N7 530 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 USP17L22D6RA61 530 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 USP17L17D6RBQ6 530 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 USP17L19D6RCP7 530 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 USP17L20D6RJB6 530 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 PDE6AP16499 860 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 CACNB2Q08289 660 aaPredicted RBP29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 USP17L24Q0WX57 530 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 SLC9C2Q5TAH2 1124 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 MAP3K21Q5TCX8 1036 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 DIEXFQ68CQ4 756 aaKnown RBP29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 ANKLE1Q8NAG6 615 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 USP6NLQ92738 828 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 EDC3Q96F86 508 aaKnown RBP29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 C12orf42Q96LP6 360 aa29.18■■■□□ 2.26
PTPRJ-205ENST00000527952 GOLIM4O00461 696 aa29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 CCND3P30281 292 aaPredicted RBP29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 GUCY1A2P33402 732 aa29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 MORN1Q5T089 497 aa29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 WDR78Q5VTH9 848 aa29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 CATSPERGQ6ZRH7 1159 aa29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 NBPF3Q9H094 633 aa29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 C11orf49Q9H6J7 331 aa29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 CABP5Q9NP86 173 aa29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 OGDHLQ9ULD0 1010 aa29.17■■■□□ 2.26
PTPRJ-205ENST00000527952 XRCC5P13010 732 aaKnown RBP29.16■■■□□ 2.26
PTPRJ-205ENST00000527952 SYN1P17600 705 aa29.16■■■□□ 2.26
PTPRJ-205ENST00000527952 VCAM1P19320 739 aa29.16■■■□□ 2.26
PTPRJ-205ENST00000527952 RGS2P41220 211 aa29.16■■■□□ 2.26
PTPRJ-205ENST00000527952 SEPT2Q15019 361 aa29.16■■■□□ 2.26
PTPRJ-205ENST00000527952 GTF3C2Q8WUA4 911 aaPredicted RBP29.16■■■□□ 2.26
PTPRJ-205ENST00000527952 ZBED9Q6R2W3 1325 aa29.16■■■□□ 2.26
PTPRJ-205ENST00000527952 ZNF532Q9HCE3 1301 aa29.16■■■□□ 2.26
PTPRJ-205ENST00000527952 SOX1O00570 391 aaPredicted RBP29.15■■■□□ 2.26
PTPRJ-205ENST00000527952 CYP2D6P10635 497 aa29.15■■■□□ 2.26
PTPRJ-205ENST00000527952 SLFNL1Q499Z3 407 aa29.15■■■□□ 2.26
PTPRJ-205ENST00000527952 HSP90AB4PQ58FF6 505 aa29.15■■■□□ 2.26
PTPRJ-205ENST00000527952 SDR42E1Q8WUS8 393 aa29.15■■■□□ 2.26
PTPRJ-205ENST00000527952 MCM9Q9NXL9 1143 aa29.15■■■□□ 2.26
PTPRJ-205ENST00000527952 COG6Q9Y2V7 657 aa29.15■■■□□ 2.26
PTPRJ-205ENST00000527952 RABGAP1Q9Y3P9 1069 aa29.15■■■□□ 2.26
PTPRJ-205ENST00000527952 MPHOSPH10O00566 681 aaKnown RBP29.14■■■□□ 2.26
PTPRJ-205ENST00000527952 USP14P54578 494 aa29.14■■■□□ 2.26
PTPRJ-205ENST00000527952 TTF1Q15361 905 aaPredicted RBP29.14■■■□□ 2.26
PTPRJ-205ENST00000527952 SIRT2Q8IXJ6 389 aa29.14■■■□□ 2.26
PTPRJ-205ENST00000527952 CLASRPQ8N2M8 674 aaKnown RBP29.14■■■□□ 2.26
PTPRJ-205ENST00000527952 LCORLQ8N3X6 602 aa29.14■■■□□ 2.26
PTPRJ-205ENST00000527952 KIAA1683Q9H0B3 1180 aa29.14■■■□□ 2.26
PTPRJ-205ENST00000527952 RPAP3Q9H6T3 665 aaPredicted RBP29.14■■■□□ 2.26
PTPRJ-205ENST00000527952 BTBD7Q9P203 1132 aa29.14■■■□□ 2.26
PTPRJ-205ENST00000527952 IFIT2P09913 472 aaKnown RBP29.13■■■□□ 2.25
PTPRJ-205ENST00000527952 CRNKL1Q9BZJ0 848 aaKnown RBP29.13■■■□□ 2.25
PTPRJ-205ENST00000527952 GABPAQ06546 454 aa29.12■■■□□ 2.25
PTPRJ-205ENST00000527952 MAP2K5Q13163 448 aa29.12■■■□□ 2.25
PTPRJ-205ENST00000527952 SLC44A5Q8NCS7 719 aa29.12■■■□□ 2.25
PTPRJ-205ENST00000527952 KIF1BPQ96EK5 621 aa29.12■■■□□ 2.25
PTPRJ-205ENST00000527952 LRCH3Q96II8 777 aa29.12■■■□□ 2.25
PTPRJ-205ENST00000527952 APBA2Q99767 749 aa29.12■■■□□ 2.25
PTPRJ-205ENST00000527952 FLRT1Q9NZU1 646 aa29.12■■■□□ 2.25
PTPRJ-205ENST00000527952 PFASO15067 1338 aa29.12■■■□□ 2.25
PTPRJ-205ENST00000527952 TCRBV5S4A2TA0A5A2 114 aa29.11■■■□□ 2.25
PTPRJ-205ENST00000527952 TRMT44Q8IYL2 757 aaKnown RBP29.11■■■□□ 2.25
PTPRJ-205ENST00000527952 ARMT1Q9H993 441 aa29.11■■■□□ 2.25
PTPRJ-205ENST00000527952 A0A1W2PRG0 241 aa29.1■■■□□ 2.25
PTPRJ-205ENST00000527952 CCNA1P78396 465 aa29.1■■■□□ 2.25
PTPRJ-205ENST00000527952 LHX8Q68G74 356 aa29.1■■■□□ 2.25
PTPRJ-205ENST00000527952 BOLA2Q9H3K6 86 aa29.1■■■□□ 2.25
PTPRJ-205ENST00000527952 SPDYE16A6NNV3 312 aaPredicted RBP29.09■■■□□ 2.25
PTPRJ-205ENST00000527952 PRKAB2O43741 272 aa29.09■■■□□ 2.25
PTPRJ-205ENST00000527952 TMED8Q6PL24 325 aaPredicted RBP29.09■■■□□ 2.25
PTPRJ-205ENST00000527952 RPAP2Q8IXW5 612 aaPredicted RBP29.09■■■□□ 2.25
PTPRJ-205ENST00000527952 DYNLL2Q96FJ2 89 aa29.09■■■□□ 2.25
PTPRJ-205ENST00000527952 DCP1AQ9NPI6 582 aaPredicted RBP29.09■■■□□ 2.25
PTPRJ-205ENST00000527952 BAZ2AQ9UIF9 1905 aaKnown RBP29.08■■■□□ 2.25
PTPRJ-205ENST00000527952 SMIM22K7EJ46 135 aa29.08■■■□□ 2.25
PTPRJ-205ENST00000527952 CHGBP05060 677 aa29.08■■■□□ 2.25
PTPRJ-205ENST00000527952 PTPREP23469 700 aa29.08■■■□□ 2.25
PTPRJ-205ENST00000527952 CLEC10AQ8IUN9 316 aa29.08■■■□□ 2.25
PTPRJ-205ENST00000527952 GDF15Q99988 308 aa29.08■■■□□ 2.25
PTPRJ-205ENST00000527952 ZBTB40Q9NUA8 1239 aa29.08■■■□□ 2.25
PTPRJ-205ENST00000527952 MS4A1P11836 297 aa29.07■■■□□ 2.24
PTPRJ-205ENST00000527952 MYH8P13535 1937 aa29.07■■■□□ 2.24
PTPRJ-205ENST00000527952 KIAA1755Q5JYT7 1200 aa29.07■■■□□ 2.24
PTPRJ-205ENST00000527952 NPLOC4Q8TAT6 608 aa29.07■■■□□ 2.24
PTPRJ-205ENST00000527952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.07■■■□□ 2.24
PTPRJ-205ENST00000527952 FRMPD3Q5JV73 1810 aa29.06■■■□□ 2.24
PTPRJ-205ENST00000527952 A0A1W2PPC1 479 aa29.06■■■□□ 2.24
PTPRJ-205ENST00000527952 SLC15A5A6NIM6 579 aa29.06■■■□□ 2.24
PTPRJ-205ENST00000527952 HMMRO75330 724 aa29.06■■■□□ 2.24
PTPRJ-205ENST00000527952 GLRX3O76003 335 aaKnown RBP29.06■■■□□ 2.24
PTPRJ-205ENST00000527952 CYP2D7A0A087X1C5 515 aa29.05■■■□□ 2.24
PTPRJ-205ENST00000527952 MBD4O95243 580 aa29.05■■■□□ 2.24
PTPRJ-205ENST00000527952 MAGEA10P43363 369 aaPredicted RBP29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms