RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 IRX3P78415 501 aaPredicted RBP10.31□□□□□ -0.76
CHD7-206ENST00000527900 ABCB5Q2M3G0 1257 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 LBX2Q6XYB7 198 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 CATSPERGQ6ZRH7 1159 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 SIAH1Q8IUQ4 282 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 LCORLQ8N3X6 602 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 GPRC5AQ8NFJ5 357 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 SDR42E1Q8WUS8 393 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 DNAJC2Q99543 621 aaKnown RBP10.31□□□□□ -0.76
CHD7-206ENST00000527900 CRNKL1Q9BZJ0 848 aaKnown RBP10.31□□□□□ -0.76
CHD7-206ENST00000527900 BOLA2Q9H3K6 86 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 PAG1Q9NWQ8 432 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 TAOK2Q9UL54 1235 aa10.31□□□□□ -0.76
CHD7-206ENST00000527900 RANBP2P49792 3224 aaKnown RBP10.31□□□□□ -0.76
CHD7-206ENST00000527900 A0A1W2PRG0 241 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 USP17L15C9J2P7 530 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 USP17L13C9JLJ4 530 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 USP17L11C9JVI0 530 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 USP17L18D6R9N7 530 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 USP17L22D6RA61 530 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 USP17L17D6RBQ6 530 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 USP17L19D6RCP7 530 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 USP17L20D6RJB6 530 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 H0YGN5 161 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 SMIM22K7EJ46 135 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 CHGBP05060 677 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 MNX1P50219 401 aaPredicted RBP10.3□□□□□ -0.76
CHD7-206ENST00000527900 ERVK-9P63128 1117 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 ERVK-24P63145 666 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 USP17L24Q0WX57 530 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 TRIM32Q13049 653 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 MORN1Q5T089 497 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 MAP3K21Q5TCX8 1036 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 GTF3C2Q8WUA4 911 aaPredicted RBP10.3□□□□□ -0.76
CHD7-206ENST00000527900 TRIB2Q92519 343 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 DEFB118Q96PH6 123 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 PORCNQ9H237 461 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 PRO3102Q9H379 93 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 MCM9Q9NXL9 1143 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 PCDH10Q9P2E7 1040 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 COLQQ9Y215 455 aaPredicted RBP10.3□□□□□ -0.76
CHD7-206ENST00000527900 ALPK3Q96L96 1907 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 RPTORQ8N122 1335 aa10.3□□□□□ -0.76
CHD7-206ENST00000527900 PRKAB2O43741 272 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 SMARCA5O60264 1052 aaPredicted RBP10.29□□□□□ -0.76
CHD7-206ENST00000527900 HMGCRP04035 888 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 POLR3DP05423 398 aaPredicted RBP10.29□□□□□ -0.76
CHD7-206ENST00000527900 CYP2D6P10635 497 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 MAPK4P31152 587 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 USP14P54578 494 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 SEPT2Q15019 361 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 RAB3GAP1Q15042 981 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 UBE3CQ15386 1083 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 LRRCC1Q9C099 1032 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.29□□□□□ -0.76
CHD7-206ENST00000527900 DCTPP1Q9H773 170 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 ARMT1Q9H993 441 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 ATP8A2Q9NTI2 1148 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 RABGAP1Q9Y3P9 1069 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 MYH8P13535 1937 aa10.29□□□□□ -0.76
CHD7-206ENST00000527900 CEP290O15078 2479 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 FARP2O94887 1054 aaPredicted RBP10.28□□□□□ -0.76
CHD7-206ENST00000527900 IGHA2P01877 340 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 TFRCP02786 760 aaKnown RBP10.28□□□□□ -0.76
CHD7-206ENST00000527900 VCAM1P19320 739 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 FXR1P51114 621 aaKnown RBP eCLIP10.28□□□□□ -0.76
CHD7-206ENST00000527900 ZYXQ15942 572 aaKnown RBP10.28□□□□□ -0.76
CHD7-206ENST00000527900 KIAA1755Q5JYT7 1200 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 C12orf60Q5U649 245 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 GPR142Q7Z601 462 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 SLC44A5Q8NCS7 719 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 NUDT12Q9BQG2 462 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 CABP5Q9NP86 173 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 BTBD7Q9P203 1132 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 SWAP70Q9UH65 585 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 SZT2Q5T011 3432 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 PARP14Q460N5 1801 aa10.28□□□□□ -0.76
CHD7-206ENST00000527900 SPDYE16A6NNV3 312 aaPredicted RBP10.27□□□□□ -0.77
CHD7-206ENST00000527900 MBD4O95243 580 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 CYP2B6P20813 491 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 PLEKHH3Q7Z736 793 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 ANKLE1Q8NAG6 615 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 SOCS4Q8WXH5 440 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 DPF3Q92784 378 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 DYNLL2Q96FJ2 89 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 HTATIP2Q9BUP3 242 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.27□□□□□ -0.77
CHD7-206ENST00000527900 PUS7LQ9H0K6 701 aaKnown RBP10.27□□□□□ -0.77
CHD7-206ENST00000527900 HMX1Q9NP08 348 aaPredicted RBP10.27□□□□□ -0.77
CHD7-206ENST00000527900 OGDHLQ9ULD0 1010 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 A0A0G2JMZ2 1700 aa10.27□□□□□ -0.77
CHD7-206ENST00000527900 DNAH12Q6ZR08 3092 aa10.26□□□□□ -0.77
CHD7-206ENST00000527900 CYP2D7A0A087X1C5 515 aa10.26□□□□□ -0.77
CHD7-206ENST00000527900 USP17L12C9JPN9 530 aa10.26□□□□□ -0.77
CHD7-206ENST00000527900 USP17L21D6R901 530 aa10.26□□□□□ -0.77
CHD7-206ENST00000527900 HOXC6P09630 235 aa10.26□□□□□ -0.77
CHD7-206ENST00000527900 AKR1B1P15121 316 aa10.26□□□□□ -0.77
CHD7-206ENST00000527900 PTPREP23469 700 aa10.26□□□□□ -0.77
CHD7-206ENST00000527900 CDK8P49336 464 aa10.26□□□□□ -0.77
CHD7-206ENST00000527900 CACNB2Q08289 660 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms