RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PPFIBP1Q86W92 1011 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 TXLNBQ8N3L3 684 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 TMEM51Q9NW97 253 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 ZNF532Q9HCE3 1301 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 ERVV-1B6SEH8 477 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 KLRK1P26718 216 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 ENOX1Q8TC92 643 aaKnown RBP14.24□□□□□ -0.13
CAPN1-208ENST00000527323 IGDCC4Q8TDY8 1250 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 WASF1Q92558 559 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 RABGGTAQ92696 567 aa14.24□□□□□ -0.13
CAPN1-208ENST00000527323 PUF60Q9UHX1 559 aaKnown RBP14.24□□□□□ -0.13
CAPN1-208ENST00000527323 AKR1B15C9JRZ8 316 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-208ENST00000527323 CCDC175P0C221 793 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 GYS2P54840 703 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 NTRK3Q16288 839 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 TRIM22Q8IYM9 498 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 COL4A1P02462 1669 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 STX17P56962 302 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 MDM2Q00987 491 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-208ENST00000527323 CTDSPL2Q05D32 466 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 TTF1Q15361 905 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-208ENST00000527323 LY9Q9HBG7 655 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 PIH1D3Q9NQM4 214 aaKnown RBP14.23□□□□□ -0.13
CAPN1-208ENST00000527323 NARFQ9UHQ1 456 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 SOWAHDA6NJG2 315 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 GUCY1A2P33402 732 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 CMTR1Q8N1G2 835 aaKnown RBP14.23□□□□□ -0.13
CAPN1-208ENST00000527323 ZKSCAN3Q9BRR0 538 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 NAPBQ9H115 298 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 FAM217BQ9NTX9 383 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-208ENST00000527323 ZSWIM5Q9P217 1185 aa14.23□□□□□ -0.13
CAPN1-208ENST00000527323 TXLNAP40222 546 aa14.22□□□□□ -0.13
CAPN1-208ENST00000527323 RSRC2Q7L4I2 434 aaKnown RBP14.22□□□□□ -0.13
CAPN1-208ENST00000527323 MRPL44Q9H9J2 332 aaKnown RBP14.22□□□□□ -0.13
CAPN1-208ENST00000527323 ZNF652Q9Y2D9 606 aa14.22□□□□□ -0.13
CAPN1-208ENST00000527323 PTPREP23469 700 aa14.22□□□□□ -0.13
CAPN1-208ENST00000527323 AFMP43652 599 aa14.22□□□□□ -0.13
CAPN1-208ENST00000527323 PHKA1P46020 1223 aa14.22□□□□□ -0.13
CAPN1-208ENST00000527323 BCAMP50895 628 aa14.22□□□□□ -0.13
CAPN1-208ENST00000527323 TRIM28Q13263 835 aaKnown RBP14.22□□□□□ -0.13
CAPN1-208ENST00000527323 NUP133Q8WUM0 1156 aa14.22□□□□□ -0.13
CAPN1-208ENST00000527323 KIFC2Q96AC6 838 aa14.22□□□□□ -0.13
CAPN1-208ENST00000527323 PCDHB6Q9Y5E3 794 aa14.22□□□□□ -0.13
CAPN1-208ENST00000527323 TEX33O43247 280 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 KIF5CO60282 957 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 PDE6AP16499 860 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 ZNF18P17022 549 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 GYG1P46976 350 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 TOB1P50616 345 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-208ENST00000527323 CHMP4BP1P59074 171 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 MCM6Q14566 821 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 LONRF2Q1L5Z9 754 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 COL23A1Q86Y22 540 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-208ENST00000527323 RGS22Q8NE09 1264 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 CSF1RP07333 972 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 LMAN1P49257 510 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 NR5A1Q13285 461 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 MORC3Q14149 939 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 KIF4BQ2VIQ3 1234 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 RILPL1Q5EBL4 403 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 JAKMIP3Q5VZ66 844 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 IGSF22Q8N9C0 903 aa14.21□□□□□ -0.13
CAPN1-208ENST00000527323 FBXO2Q9UK22 296 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-208ENST00000527323 FMNL1O95466 1100 aaPredicted RBP14.21□□□□□ -0.14
CAPN1-208ENST00000527323 MMP1P03956 469 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 GYS1P13807 737 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 NR1I3Q14994 352 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 UBE3CQ15386 1083 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 RTN1Q16799 776 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 ZNF569Q5MCW4 686 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 KANK3Q6NY19 840 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 USP49Q70CQ1 688 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 FUT8Q9BYC5 575 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 CABP5Q9NP86 173 aa14.21□□□□□ -0.14
CAPN1-208ENST00000527323 RBL2Q08999 1139 aa14.2□□□□□ -0.14
CAPN1-208ENST00000527323 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-208ENST00000527323 RIPOR2Q9Y4F9 1068 aa14.2□□□□□ -0.14
CAPN1-208ENST00000527323 NUP188Q5SRE5 1749 aa14.2□□□□□ -0.14
CAPN1-208ENST00000527323 ERICH2A1L162 156 aa14.2□□□□□ -0.14
CAPN1-208ENST00000527323 PLCD1P51178 756 aa14.2□□□□□ -0.14
CAPN1-208ENST00000527323 SLC4A8Q2Y0W8 1093 aa14.2□□□□□ -0.14
CAPN1-208ENST00000527323 MFSD6Q6ZSS7 791 aa14.2□□□□□ -0.14
CAPN1-208ENST00000527323 SGMS1Q86VZ5 419 aa14.2□□□□□ -0.14
CAPN1-208ENST00000527323 STRBPQ96SI9 672 aaKnown RBP14.2□□□□□ -0.14
CAPN1-208ENST00000527323 PPP1R1BQ9UD71 204 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-208ENST00000527323 IFNAR1P17181 557 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 SART3Q15020 963 aaKnown RBP14.19□□□□□ -0.14
CAPN1-208ENST00000527323 FILIP1LQ4L180 1135 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 SRGAP1Q7Z6B7 1085 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 IFNL3Q8IZI9 196 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 CSRNP2Q9H175 543 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 PLEKHG2Q9H7P9 1386 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 VGLL3A8MV65 326 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 LIFRP42702 1097 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 SARSP49591 514 aaKnown RBP14.19□□□□□ -0.14
CAPN1-208ENST00000527323 ZSCAN26Q16670 478 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 TRIML1Q8N9V2 468 aa14.19□□□□□ -0.14
CAPN1-208ENST00000527323 CCDC151A5D8V7 595 aa14.18□□□□□ -0.14
CAPN1-208ENST00000527323 PATL2C9JE40 543 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms