RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 RASA1P20936 1047 aa23.21■■□□□ 1.31
TTC39A-215ENST00000527205 ZYXQ15942 572 aaKnown RBP23.21■■□□□ 1.31
TTC39A-215ENST00000527205 CD99L2Q8TCZ2 262 aa23.21■■□□□ 1.31
TTC39A-215ENST00000527205 NACAP1Q9BZK3 213 aa23.21■■□□□ 1.31
TTC39A-215ENST00000527205 DIAPH3Q9NSV4 1193 aa23.21■■□□□ 1.31
TTC39A-215ENST00000527205 EMILIN3Q9NT22 766 aa23.21■■□□□ 1.31
TTC39A-215ENST00000527205 CPA4Q9UI42 421 aa23.21■■□□□ 1.31
TTC39A-215ENST00000527205 A0A1W2PRG0 241 aa23.2■■□□□ 1.3
TTC39A-215ENST00000527205 PRDM1O75626 825 aa23.2■■□□□ 1.3
TTC39A-215ENST00000527205 HSPD1P10809 573 aaKnown RBP23.2■■□□□ 1.3
TTC39A-215ENST00000527205 PPARAQ07869 468 aa23.2■■□□□ 1.3
TTC39A-215ENST00000527205 CCDC136Q96JN2 1154 aa23.2■■□□□ 1.3
TTC39A-215ENST00000527205 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.2■■□□□ 1.3
TTC39A-215ENST00000527205 TAOK2Q9UL54 1235 aa23.2■■□□□ 1.3
TTC39A-215ENST00000527205 CTDSPL2Q05D32 466 aa23.19■■□□□ 1.3
TTC39A-215ENST00000527205 C17orf99Q6UX52 265 aa23.19■■□□□ 1.3
TTC39A-215ENST00000527205 TMEM179Q6ZVK1 233 aa23.19■■□□□ 1.3
TTC39A-215ENST00000527205 SIAH1Q8IUQ4 282 aa23.19■■□□□ 1.3
TTC39A-215ENST00000527205 MCOLN1Q9GZU1 580 aa23.19■■□□□ 1.3
TTC39A-215ENST00000527205 SLC45A1Q9Y2W3 748 aa23.19■■□□□ 1.3
TTC39A-215ENST00000527205 DOCK3Q8IZD9 2030 aa23.18■■□□□ 1.3
TTC39A-215ENST00000527205 SP3Q02447 781 aa23.18■■□□□ 1.3
TTC39A-215ENST00000527205 ALX1Q15699 326 aa23.18■■□□□ 1.3
TTC39A-215ENST00000527205 PARK7Q99497 189 aaKnown RBP23.18■■□□□ 1.3
TTC39A-215ENST00000527205 INCENPQ9NQS7 918 aa23.18■■□□□ 1.3
TTC39A-215ENST00000527205 C19orf81C9J6K1 198 aa23.17■■□□□ 1.3
TTC39A-215ENST00000527205 FGAP02671 866 aa23.17■■□□□ 1.3
TTC39A-215ENST00000527205 USP17L2Q6R6M4 530 aa23.17■■□□□ 1.3
TTC39A-215ENST00000527205 CTU1Q7Z7A3 348 aaKnown RBP23.17■■□□□ 1.3
TTC39A-215ENST00000527205 CCDC17Q96LX7 622 aa23.17■■□□□ 1.3
TTC39A-215ENST00000527205 FEZ1Q99689 392 aa23.17■■□□□ 1.3
TTC39A-215ENST00000527205 ARHGAP39Q9C0H5 1083 aa23.17■■□□□ 1.3
TTC39A-215ENST00000527205 TMOD4Q9NZQ9 345 aa23.17■■□□□ 1.3
TTC39A-215ENST00000527205 HIP1O00291 1037 aa23.16■■□□□ 1.3
TTC39A-215ENST00000527205 ECM2O94769 699 aaPredicted RBP23.16■■□□□ 1.3
TTC39A-215ENST00000527205 BCRP11274 1271 aa23.16■■□□□ 1.3
TTC39A-215ENST00000527205 CTGFP29279 349 aa23.16■■□□□ 1.3
TTC39A-215ENST00000527205 ICA1Q05084 483 aa23.16■■□□□ 1.3
TTC39A-215ENST00000527205 KIAA1755Q5JYT7 1200 aa23.16■■□□□ 1.3
TTC39A-215ENST00000527205 C12orf42Q96LP6 360 aa23.16■■□□□ 1.3
TTC39A-215ENST00000527205 KIAA1683Q9H0B3 1180 aa23.16■■□□□ 1.3
TTC39A-215ENST00000527205 MKNK2Q9HBH9 465 aa23.16■■□□□ 1.3
TTC39A-215ENST00000527205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.16■■□□□ 1.3
TTC39A-215ENST00000527205 COL11A1P12107 1806 aaPredicted RBP23.16■■□□□ 1.3
TTC39A-215ENST00000527205 A0A0G2JMZ2 1700 aa23.16■■□□□ 1.3
TTC39A-215ENST00000527205 ZMYM6O95789 1325 aa23.15■■□□□ 1.3
TTC39A-215ENST00000527205 CHMLP26374 656 aa23.15■■□□□ 1.3
TTC39A-215ENST00000527205 NBPF3Q9H094 633 aa23.15■■□□□ 1.3
TTC39A-215ENST00000527205 ASCC2Q9H1I8 757 aaPredicted RBP23.15■■□□□ 1.3
TTC39A-215ENST00000527205 ERO1AQ96HE7 468 aa23.14■■□□□ 1.29
TTC39A-215ENST00000527205 ANAPC4Q9UJX5 808 aa23.14■■□□□ 1.29
TTC39A-215ENST00000527205 PLXNB2O15031 1838 aa23.13■■□□□ 1.29
TTC39A-215ENST00000527205 IGKV6D-41A0A0C4DH26 115 aa23.13■■□□□ 1.29
TTC39A-215ENST00000527205 PEX10O60683 326 aa23.13■■□□□ 1.29
TTC39A-215ENST00000527205 EEF2P13639 858 aaKnown RBP23.13■■□□□ 1.29
TTC39A-215ENST00000527205 VCAM1P19320 739 aa23.13■■□□□ 1.29
TTC39A-215ENST00000527205 HOXA7P31268 230 aaPredicted RBP23.13■■□□□ 1.29
TTC39A-215ENST00000527205 HAND2P61296 217 aa23.13■■□□□ 1.29
TTC39A-215ENST00000527205 FAM47AQ5JRC9 791 aa23.13■■□□□ 1.29
TTC39A-215ENST00000527205 OTOP1Q7RTM1 612 aa23.13■■□□□ 1.29
TTC39A-215ENST00000527205 PLIN4Q96Q06 1357 aa23.13■■□□□ 1.29
TTC39A-215ENST00000527205 USP14P54578 494 aa23.12■■□□□ 1.29
TTC39A-215ENST00000527205 LACTBP83111 547 aaPredicted RBP23.12■■□□□ 1.29
TTC39A-215ENST00000527205 POTEEQ6S8J3 1075 aa23.12■■□□□ 1.29
TTC39A-215ENST00000527205 NKX2-3Q8TAU0 364 aa23.12■■□□□ 1.29
TTC39A-215ENST00000527205 PNMA3Q9UL41 463 aa23.12■■□□□ 1.29
TTC39A-215ENST00000527205 TRIM17Q9Y577 477 aa23.12■■□□□ 1.29
TTC39A-215ENST00000527205 OSBPP22059 807 aa23.11■■□□□ 1.29
TTC39A-215ENST00000527205 MFAP1P55081 439 aaKnown RBP23.11■■□□□ 1.29
TTC39A-215ENST00000527205 ATP2B2Q01814 1243 aa23.11■■□□□ 1.29
TTC39A-215ENST00000527205 PDE4BQ07343 736 aa23.11■■□□□ 1.29
TTC39A-215ENST00000527205 PABPC4Q13310 644 aaKnown RBP eCLIP23.11■■□□□ 1.29
TTC39A-215ENST00000527205 TBC1D10CQ8IV04 446 aa23.11■■□□□ 1.29
TTC39A-215ENST00000527205 SMCR8Q8TEV9 937 aaPredicted RBP23.11■■□□□ 1.29
TTC39A-215ENST00000527205 P2RX7Q99572 595 aaKnown RBP23.11■■□□□ 1.29
TTC39A-215ENST00000527205 ARHGEF10LQ9HCE6 1279 aa23.11■■□□□ 1.29
TTC39A-215ENST00000527205 TMX2Q9Y320 296 aa23.11■■□□□ 1.29
TTC39A-215ENST00000527205 RAD50Q92878 1312 aa23.1■■□□□ 1.29
TTC39A-215ENST00000527205 IRX3P78415 501 aaPredicted RBP23.1■■□□□ 1.29
TTC39A-215ENST00000527205 ZNF444Q8N0Y2 327 aaPredicted RBP23.1■■□□□ 1.29
TTC39A-215ENST00000527205 ANKRD13CQ8N6S4 541 aa23.1■■□□□ 1.29
TTC39A-215ENST00000527205 KANSL2Q9H9L4 492 aa23.1■■□□□ 1.29
TTC39A-215ENST00000527205 SLC3A2P08195 630 aaKnown RBP23.09■■□□□ 1.29
TTC39A-215ENST00000527205 CEP95Q96GE4 821 aa23.09■■□□□ 1.29
TTC39A-215ENST00000527205 ABHD8Q96I13 439 aa23.09■■□□□ 1.29
TTC39A-215ENST00000527205 DSCC1Q9BVC3 393 aa23.09■■□□□ 1.29
TTC39A-215ENST00000527205 RPAP3Q9H6T3 665 aaPredicted RBP23.09■■□□□ 1.29
TTC39A-215ENST00000527205 VCPKMTQ9H867 229 aa23.09■■□□□ 1.29
TTC39A-215ENST00000527205 EFCC1Q9HA90 598 aa23.09■■□□□ 1.29
TTC39A-215ENST00000527205 HTTP42858 3142 aa23.09■■□□□ 1.29
TTC39A-215ENST00000527205 FGRP09769 529 aa23.08■■□□□ 1.29
TTC39A-215ENST00000527205 HERVK_113P62684 666 aa23.08■■□□□ 1.29
TTC39A-215ENST00000527205 TFAP4Q01664 338 aa23.08■■□□□ 1.29
TTC39A-215ENST00000527205 CATSPERGQ6ZRH7 1159 aa23.08■■□□□ 1.29
TTC39A-215ENST00000527205 SPICE1Q8N0Z3 855 aa23.08■■□□□ 1.29
TTC39A-215ENST00000527205 NEDD1Q8NHV4 660 aa23.08■■□□□ 1.29
TTC39A-215ENST00000527205 TRIM47Q96LD4 638 aa23.08■■□□□ 1.29
TTC39A-215ENST00000527205 ZNF287Q9HBT7 754 aa23.08■■□□□ 1.29
TTC39A-215ENST00000527205 TXNRD2Q9NNW7 524 aa23.08■■□□□ 1.29
TTC39A-215ENST00000527205 USP17L15C9J2P7 530 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms