RNA–Protein interactions for RNA: ENST00000527045.1

FDFT1-211, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-211ENST00000527045 FOXK2Q01167 660 aa10.88□□□□□ -0.67
FDFT1-211ENST00000527045 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
FDFT1-211ENST00000527045 FKBP5Q13451 457 aaPredicted RBP10.88□□□□□ -0.67
FDFT1-211ENST00000527045 EDC3Q96F86 508 aaKnown RBP10.88□□□□□ -0.67
FDFT1-211ENST00000527045 PAGR1Q9BTK6 254 aa10.88□□□□□ -0.67
FDFT1-211ENST00000527045 RBPJLQ9UBG7 517 aa10.88□□□□□ -0.67
FDFT1-211ENST00000527045 TACC3Q9Y6A5 838 aa10.88□□□□□ -0.67
FDFT1-211ENST00000527045 WDFY4Q6ZS81 3184 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 SMIM22K7EJ46 135 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 CLTBP09497 229 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 ATP2B2Q01814 1243 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 FLIIQ13045 1269 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 PICALMQ13492 652 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 SKIV2LQ15477 1246 aaKnown RBP10.87□□□□□ -0.67
FDFT1-211ENST00000527045 AAK1Q2M2I8 961 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 LRRC24Q50LG9 513 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 METTL24Q5JXM2 366 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 WDR66Q8TBY9 1149 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.87□□□□□ -0.678e-19■■□□□ 11.4
FDFT1-211ENST00000527045 IDI2Q9BXS1 227 aa10.87□□□□□ -0.67
FDFT1-211ENST00000527045 DDX4Q9NQI0 724 aaKnown RBP10.87□□□□□ -0.67
FDFT1-211ENST00000527045 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
FDFT1-211ENST00000527045 POTEB3A0JP26 581 aa10.86□□□□□ -0.67
FDFT1-211ENST00000527045 NHLH1Q02575 133 aa10.86□□□□□ -0.67
FDFT1-211ENST00000527045 MTMR2Q13614 643 aa10.86□□□□□ -0.67
FDFT1-211ENST00000527045 SH3D19Q5HYK7 790 aa10.86□□□□□ -0.67
FDFT1-211ENST00000527045 WDR78Q5VTH9 848 aa10.86□□□□□ -0.67
FDFT1-211ENST00000527045 POTEBQ6S5H4 581 aa10.86□□□□□ -0.67
FDFT1-211ENST00000527045 HS3ST6Q96QI5 342 aa10.86□□□□□ -0.67
FDFT1-211ENST00000527045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.86□□□□□ -0.67
FDFT1-211ENST00000527045 BOLA1Q9Y3E2 137 aa10.86□□□□□ -0.67
FDFT1-211ENST00000527045 PRRC2BQ5JSZ5 2229 aaKnown RBP10.86□□□□□ -0.67
FDFT1-211ENST00000527045 SMCHD1A6NHR9 2005 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 MYBBP1AQ9BQG0 1328 aaKnown RBP10.85□□□□□ -0.67
FDFT1-211ENST00000527045 CACNA1FO60840 1977 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 USP17L5A8MUK1 530 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 KIAA0355O15063 1070 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 PQBP1O60828 265 aaKnown RBP10.85□□□□□ -0.67
FDFT1-211ENST00000527045 LDHBP07195 334 aaKnown RBP10.85□□□□□ -0.67
FDFT1-211ENST00000527045 CYBAP13498 195 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 HOXA7P31268 230 aaPredicted RBP10.85□□□□□ -0.67
FDFT1-211ENST00000527045 RRP1BQ14684 758 aaKnown RBP10.85□□□□□ -0.67
FDFT1-211ENST00000527045 C1orf53Q5VUE5 145 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 NPLOC4Q8TAT6 608 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 OSBPL5Q9H0X9 879 aaPredicted RBP10.85□□□□□ -0.67
FDFT1-211ENST00000527045 NKX2-4Q9H2Z4 354 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 TMEM39AQ9NV64 488 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 TMOD4Q9NZQ9 345 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 RFX7Q2KHR2 1363 aa10.85□□□□□ -0.67
FDFT1-211ENST00000527045 F6X3S4 739 aa10.84□□□□□ -0.67
FDFT1-211ENST00000527045 PDE8BO95263 885 aa10.84□□□□□ -0.67
FDFT1-211ENST00000527045 LRRC41Q15345 812 aa10.84□□□□□ -0.67
FDFT1-211ENST00000527045 VGLL2Q8N8G2 317 aa10.84□□□□□ -0.67
FDFT1-211ENST00000527045 TSR2Q969E8 191 aaKnown RBP10.84□□□□□ -0.67
FDFT1-211ENST00000527045 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
FDFT1-211ENST00000527045 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
FDFT1-211ENST00000527045 TBC1D2Q9BYX2 928 aa10.84□□□□□ -0.67
FDFT1-211ENST00000527045 AS3MTQ9HBK9 375 aa10.84□□□□□ -0.67
FDFT1-211ENST00000527045 MSRAQ9UJ68 235 aa10.84□□□□□ -0.67
FDFT1-211ENST00000527045 FAM205CA6NFA0 338 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 SLC15A5A6NIM6 579 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 GRM8O00222 908 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 ERC2O15083 957 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 TBC1D12O60347 775 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 GLRX3O76003 335 aaKnown RBP10.83□□□□□ -0.68
FDFT1-211ENST00000527045 IFIT1P09914 478 aaKnown RBP10.83□□□□□ -0.68
FDFT1-211ENST00000527045 PTPREP23469 700 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 CAP2P40123 477 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 BACE1P56817 501 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
FDFT1-211ENST00000527045 BEND3Q5T5X7 828 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 C16orf59Q7L2K0 433 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 UIMC1Q96RL1 719 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 TRANK1O15050 2925 aa10.83□□□□□ -0.68
FDFT1-211ENST00000527045 PRR33A8MZF0 331 aa10.82□□□□□ -0.68
FDFT1-211ENST00000527045 PI4K2BG5E9Z4 385 aa10.82□□□□□ -0.68
FDFT1-211ENST00000527045 TLL1O43897 1013 aa10.82□□□□□ -0.68
FDFT1-211ENST00000527045 HOXB3P14651 431 aaPredicted RBP10.82□□□□□ -0.68
FDFT1-211ENST00000527045 WDR43Q15061 677 aaKnown RBP eCLIP10.82□□□□□ -0.68
FDFT1-211ENST00000527045 RAB30Q15771 203 aa10.82□□□□□ -0.68
FDFT1-211ENST00000527045 FAM47AQ5JRC9 791 aa10.82□□□□□ -0.68
FDFT1-211ENST00000527045 TMEM240Q5SV17 173 aa10.82□□□□□ -0.68
FDFT1-211ENST00000527045 SLC44A5Q8NCS7 719 aa10.82□□□□□ -0.68
FDFT1-211ENST00000527045 SLC28A3Q9HAS3 691 aa10.82□□□□□ -0.68
FDFT1-211ENST00000527045 C9orf78Q9NZ63 289 aaPredicted RBP10.82□□□□□ -0.68
FDFT1-211ENST00000527045 ADAMTS8Q9UP79 889 aa10.82□□□□□ -0.68
FDFT1-211ENST00000527045 YBX2Q9Y2T7 364 aaKnown RBP10.82□□□□□ -0.68
FDFT1-211ENST00000527045 SEPT4O43236 478 aa10.81□□□□□ -0.68
FDFT1-211ENST00000527045 CNMDO75829 334 aa10.81□□□□□ -0.68
FDFT1-211ENST00000527045 HOXC6P09630 235 aa10.81□□□□□ -0.68
FDFT1-211ENST00000527045 ACRP10323 421 aa10.81□□□□□ -0.68
FDFT1-211ENST00000527045 FGFR2P21802 821 aa10.81□□□□□ -0.68
FDFT1-211ENST00000527045 FAAP100Q0VG06 881 aa10.81□□□□□ -0.68
FDFT1-211ENST00000527045 PUM3Q15397 648 aaKnown RBP10.81□□□□□ -0.68
FDFT1-211ENST00000527045 TWISTNBQ3B726 338 aaPredicted RBP10.81□□□□□ -0.68
FDFT1-211ENST00000527045 PRAMEF19Q5SWL8 479 aa10.81□□□□□ -0.68
FDFT1-211ENST00000527045 RASIP1Q5U651 963 aa10.81□□□□□ -0.68
FDFT1-211ENST00000527045 KLHDC4Q8TBB5 520 aa10.81□□□□□ -0.68
FDFT1-211ENST00000527045 CCER1Q8TC90 406 aaPredicted RBP10.81□□□□□ -0.68
FDFT1-211ENST00000527045 HERVK_113Q902F9 699 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms