RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 LNPKQ9C0E8 428 aa22.99■■□□□ 1.27
PKP3-204ENST00000526971 MORF4L1Q9UBU8 362 aa22.99■■□□□ 1.27
PKP3-204ENST00000526971 SAP30BPQ9UHR5 308 aaKnown RBP22.99■■□□□ 1.27
PKP3-204ENST00000526971 PALD1Q9ULE6 856 aa22.99■■□□□ 1.27
PKP3-204ENST00000526971 SOX1O00570 391 aaPredicted RBP22.98■■□□□ 1.27
PKP3-204ENST00000526971 CHGBP05060 677 aa22.98■■□□□ 1.27
PKP3-204ENST00000526971 MNX1P50219 401 aaPredicted RBP22.98■■□□□ 1.27
PKP3-204ENST00000526971 NUCB1Q02818 461 aa22.98■■□□□ 1.27
PKP3-204ENST00000526971 PABPC4Q13310 644 aaKnown RBP eCLIP22.98■■□□□ 1.27
PKP3-204ENST00000526971 CHD1LQ86WJ1 897 aa22.98■■□□□ 1.27
PKP3-204ENST00000526971 FOXP4Q8IVH2 680 aaPredicted RBP22.98■■□□□ 1.27
PKP3-204ENST00000526971 LCORLQ8N3X6 602 aa22.98■■□□□ 1.27
PKP3-204ENST00000526971 WDR18Q9BV38 432 aa22.98■■□□□ 1.27
PKP3-204ENST00000526971 PDE1AP54750 535 aa22.97■■□□□ 1.27
PKP3-204ENST00000526971 TRIB2Q92519 343 aa22.97■■□□□ 1.27
PKP3-204ENST00000526971 ARMT1Q9H993 441 aa22.97■■□□□ 1.27
PKP3-204ENST00000526971 AS3MTQ9HBK9 375 aa22.97■■□□□ 1.27
PKP3-204ENST00000526971 TXNRD2Q9NNW7 524 aa22.97■■□□□ 1.27
PKP3-204ENST00000526971 COL6A3P12111 3177 aa22.97■■□□□ 1.27
PKP3-204ENST00000526971 FRMPD3Q5JV73 1810 aa22.96■■□□□ 1.27
PKP3-204ENST00000526971 MBD4O95243 580 aa22.96■■□□□ 1.27
PKP3-204ENST00000526971 GDF11O95390 407 aa22.96■■□□□ 1.27
PKP3-204ENST00000526971 BACE1P56817 501 aa22.96■■□□□ 1.27
PKP3-204ENST00000526971 METTL16Q86W50 562 aaKnown RBP22.96■■□□□ 1.27
PKP3-204ENST00000526971 P2RX7Q99572 595 aaKnown RBP22.96■■□□□ 1.27
PKP3-204ENST00000526971 RNF113AO15541 343 aaKnown RBP22.95■■□□□ 1.26
PKP3-204ENST00000526971 HLA-DOAP06340 250 aa22.95■■□□□ 1.26
PKP3-204ENST00000526971 CAPN2P17655 700 aa22.95■■□□□ 1.26
PKP3-204ENST00000526971 POTEEQ6S8J3 1075 aa22.95■■□□□ 1.26
PKP3-204ENST00000526971 RPTORQ8N122 1335 aa22.94■■□□□ 1.26
PKP3-204ENST00000526971 ZFYP08048 801 aaPredicted RBP22.94■■□□□ 1.26
PKP3-204ENST00000526971 ASNSP08243 561 aa22.94■■□□□ 1.26
PKP3-204ENST00000526971 HOXA7P31268 230 aaPredicted RBP22.94■■□□□ 1.26
PKP3-204ENST00000526971 IRX3P78415 501 aaPredicted RBP22.94■■□□□ 1.26
PKP3-204ENST00000526971 LRRFIP1Q32MZ4 808 aaKnown RBP22.94■■□□□ 1.26
PKP3-204ENST00000526971 NECAB2Q7Z6G3 386 aa22.94■■□□□ 1.26
PKP3-204ENST00000526971 CRACR2BQ8N4Y2 399 aaPredicted RBP22.94■■□□□ 1.26
PKP3-204ENST00000526971 PUS7LQ9H0K6 701 aaKnown RBP22.94■■□□□ 1.26
PKP3-204ENST00000526971 ZBTB21Q9ULJ3 1066 aa22.94■■□□□ 1.26
PKP3-204ENST00000526971 CYP2B6P20813 491 aa22.93■■□□□ 1.26
PKP3-204ENST00000526971 HERVK_113P62684 666 aa22.93■■□□□ 1.26
PKP3-204ENST00000526971 MAP3K21Q5TCX8 1036 aa22.93■■□□□ 1.26
PKP3-204ENST00000526971 TTC6Q86TZ1 520 aa22.93■■□□□ 1.26
PKP3-204ENST00000526971 ANKLE1Q8NAG6 615 aa22.93■■□□□ 1.26
PKP3-204ENST00000526971 SDR42E1Q8WUS8 393 aa22.93■■□□□ 1.26
PKP3-204ENST00000526971 LRCH3Q96II8 777 aa22.93■■□□□ 1.26
PKP3-204ENST00000526971 TRIM34Q9BYJ4 488 aa22.93■■□□□ 1.26
PKP3-204ENST00000526971 A0A1W2PPC1 479 aa22.92■■□□□ 1.26
PKP3-204ENST00000526971 PRKAB2O43741 272 aa22.92■■□□□ 1.26
PKP3-204ENST00000526971 C7orf61Q8IZ16 206 aa22.92■■□□□ 1.26
PKP3-204ENST00000526971 APPBP2Q92624 585 aa22.92■■□□□ 1.26
PKP3-204ENST00000526971 EHD4Q9H223 541 aa22.92■■□□□ 1.26
PKP3-204ENST00000526971 HMX1Q9NP08 348 aaPredicted RBP22.92■■□□□ 1.26
PKP3-204ENST00000526971 DCP1AQ9NPI6 582 aaPredicted RBP22.92■■□□□ 1.26
PKP3-204ENST00000526971 MCM9Q9NXL9 1143 aa22.92■■□□□ 1.26
PKP3-204ENST00000526971 TMOD4Q9NZQ9 345 aa22.92■■□□□ 1.26
PKP3-204ENST00000526971 OSBP2Q969R2 916 aa22.91■■□□□ 1.26
PKP3-204ENST00000526971 FSD1Q9BTV5 496 aa22.91■■□□□ 1.26
PKP3-204ENST00000526971 ATP8A2Q9NTI2 1148 aa22.91■■□□□ 1.26
PKP3-204ENST00000526971 RBPJLQ9UBG7 517 aa22.91■■□□□ 1.26
PKP3-204ENST00000526971 ZMYND8Q9ULU4 1186 aaPredicted RBP22.91■■□□□ 1.26
PKP3-204ENST00000526971 USP17L10C9JJH3 530 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 POLR3DP05423 398 aaPredicted RBP22.9■■□□□ 1.26
PKP3-204ENST00000526971 PRKAR2AP13861 404 aaKnown RBP22.9■■□□□ 1.26
PKP3-204ENST00000526971 Q3C1V9 767 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 PLEKHM2Q8IWE5 1019 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 EVI5LQ96CN4 794 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 STRBPQ96SI9 672 aaKnown RBP22.9■■□□□ 1.26
PKP3-204ENST00000526971 GDF15Q99988 308 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 PORCNQ9H237 461 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 EMILIN3Q9NT22 766 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 SERPINB13Q9UIV8 391 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 OGDHLQ9ULD0 1010 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 NAV1Q8NEY1 1877 aa22.9■■□□□ 1.26
PKP3-204ENST00000526971 C19orf81C9J6K1 198 aa22.89■■□□□ 1.25
PKP3-204ENST00000526971 PLCD1P51178 756 aa22.89■■□□□ 1.25
PKP3-204ENST00000526971 GPRC5AQ8NFJ5 357 aa22.89■■□□□ 1.25
PKP3-204ENST00000526971 USP6NLQ92738 828 aa22.89■■□□□ 1.25
PKP3-204ENST00000526971 SLC4A4Q9Y6R1 1079 aa22.89■■□□□ 1.25
PKP3-204ENST00000526971 PFASO15067 1338 aa22.88■■□□□ 1.25
PKP3-204ENST00000526971 ERVK-9P63128 1117 aa22.88■■□□□ 1.25
PKP3-204ENST00000526971 ERVK-24P63145 666 aa22.88■■□□□ 1.25
PKP3-204ENST00000526971 SOCS4Q8WXH5 440 aa22.88■■□□□ 1.25
PKP3-204ENST00000526971 NUDT12Q9BQG2 462 aa22.88■■□□□ 1.25
PKP3-204ENST00000526971 NBPF3Q9H094 633 aa22.88■■□□□ 1.25
PKP3-204ENST00000526971 OSBPL3Q9H4L5 887 aa22.88■■□□□ 1.25
PKP3-204ENST00000526971 GH2P01242 217 aa22.87■■□□□ 1.25
PKP3-204ENST00000526971 XRCC5P13010 732 aaKnown RBP22.87■■□□□ 1.25
PKP3-204ENST00000526971 SYN1P17600 705 aa22.87■■□□□ 1.25
PKP3-204ENST00000526971 CCL14Q16627 93 aa22.87■■□□□ 1.25
PKP3-204ENST00000526971 TATDN1Q6P1N9 297 aa22.87■■□□□ 1.25
PKP3-204ENST00000526971 PAGR1Q9BTK6 254 aa22.87■■□□□ 1.25
PKP3-204ENST00000526971 C11orf49Q9H6J7 331 aa22.87■■□□□ 1.25
PKP3-204ENST00000526971 GINM1Q9NU53 330 aa22.87■■□□□ 1.25
PKP3-204ENST00000526971 M0R2C6 588 aa22.86■■□□□ 1.25
PKP3-204ENST00000526971 CYP2D6P10635 497 aa22.86■■□□□ 1.25
PKP3-204ENST00000526971 GABPAQ06546 454 aa22.86■■□□□ 1.25
PKP3-204ENST00000526971 CACNB2Q08289 660 aaPredicted RBP22.86■■□□□ 1.25
PKP3-204ENST00000526971 ZMYM1Q5SVZ6 1142 aa22.86■■□□□ 1.25
PKP3-204ENST00000526971 GPR142Q7Z601 462 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms