RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 RNF41Q9H4P4 317 aaPredicted RBP15.33■□□□□ 0.04
SMPD1-202ENST00000526280 KANSL2Q9H9L4 492 aa15.33■□□□□ 0.04
SMPD1-202ENST00000526280 RBM8AQ9Y5S9 174 aaKnown RBP15.33■□□□□ 0.04
SMPD1-202ENST00000526280 LAMA4Q16363 1823 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 IGKV6D-41A0A0C4DH26 115 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 C19orf81C9J6K1 198 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 IGF2BP3O00425 579 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMPD1-202ENST00000526280 FOXN1O15353 648 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 TFAP4Q01664 338 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 MTMR2Q13614 643 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 SH3D19Q5HYK7 790 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 FAM47AQ5JRC9 791 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 FASTKD5Q7L8L6 764 aaKnown RBP15.32■□□□□ 0.04
SMPD1-202ENST00000526280 NEDD1Q8NHV4 660 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 ACER1Q8TDN7 264 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 PTPRFP10586 1907 aa15.32■□□□□ 0.04
SMPD1-202ENST00000526280 A0A1W2PRG0 241 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 CYP21A2P08686 494 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 HMGCS2P54868 508 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 ICA1Q05084 483 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 OTUD7BQ6GQQ9 843 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 PROCA1Q8NCQ7 364 aaPredicted RBP15.31■□□□□ 0.04
SMPD1-202ENST00000526280 BEGAINQ9BUH8 593 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 KIAA1683Q9H0B3 1180 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 RNF186Q9NXI6 227 aa15.31■□□□□ 0.04
SMPD1-202ENST00000526280 GREB1LQ9C091 1923 aaPredicted RBP15.31■□□□□ 0.04
SMPD1-202ENST00000526280 PLIN4Q96Q06 1357 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 TSPY2A6NKD2 308 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 RANBP6O60518 1105 aaKnown RBP15.3■□□□□ 0.04
SMPD1-202ENST00000526280 ALDH1A1P00352 501 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 NT5C2P49902 561 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 NECTIN1Q15223 517 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 RRP12Q5JTH9 1297 aaKnown RBP15.3■□□□□ 0.04
SMPD1-202ENST00000526280 COL13A1Q5TAT6 717 aaPredicted RBP15.3■□□□□ 0.04
SMPD1-202ENST00000526280 GPAT2Q6NUI2 795 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 USP17L2Q6R6M4 530 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 GADL1Q6ZQY3 521 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 ANKRD23Q86SG2 305 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 CLEC10AQ8IUN9 316 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 FAM43AQ8N2R8 423 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 ARHGEF10LQ9HCE6 1279 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 TOMM22Q9NS69 142 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 SAGE1Q9NXZ1 904 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 MTMR4Q9NYA4 1195 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 NYAP2Q9P242 653 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 NEDD4P46934 1319 aa15.3■□□□□ 0.04
SMPD1-202ENST00000526280 CA12O43570 354 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 TRPA1O75762 1119 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 EEF2P13639 858 aaKnown RBP15.29■□□□□ 0.04
SMPD1-202ENST00000526280 USP14P54578 494 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 DGKZQ13574 1117 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 NKX2-3Q8TAU0 364 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 CEP95Q96GE4 821 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 C12orf42Q96LP6 360 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 FEZ1Q99689 392 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 ZCCHC17Q9NP64 241 aaKnown RBP15.29■□□□□ 0.04
SMPD1-202ENST00000526280 IL17RBQ9NRM6 502 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 EMILIN3Q9NT22 766 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 TMX2Q9Y320 296 aa15.29■□□□□ 0.04
SMPD1-202ENST00000526280 REC8O95072 547 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
SMPD1-202ENST00000526280 CREB3L3Q68CJ9 461 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 ESR2Q92731 530 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 MKL1Q969V6 931 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 CFHR5Q9BXR6 569 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 KRT23Q9C075 422 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 CNNM2Q9H8M5 875 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 TCP11L1Q9NUJ3 509 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 AGTPBP1Q9UPW5 1226 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 TAF6LQ9Y6J9 622 aa15.28■□□□□ 0.04
SMPD1-202ENST00000526280 E7EWF7 191 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 PDHXO00330 501 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 SLC27A2O14975 620 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 NMT2O60551 498 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 TTLL1O95922 423 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 NOVP48745 357 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 ATP2B2Q01814 1243 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.04
SMPD1-202ENST00000526280 PPP4R3BQ5MIZ7 849 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 TREML2Q5T2D2 321 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 SH2D4AQ9H788 454 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 CLIP2Q9UDT6 1046 aa15.27■□□□□ 0.04
SMPD1-202ENST00000526280 LOC285556D6RIA3 1793 aa15.27■□□□□ 0.03
SMPD1-202ENST00000526280 B4E1Z4 1266 aa15.26■□□□□ 0.03
SMPD1-202ENST00000526280 EPB41L2O43491 1005 aaKnown RBP15.26■□□□□ 0.03
SMPD1-202ENST00000526280 KDM4AO75164 1064 aa15.26■□□□□ 0.03
SMPD1-202ENST00000526280 HOXA7P31268 230 aaPredicted RBP15.26■□□□□ 0.03
SMPD1-202ENST00000526280 KIAA1755Q5JYT7 1200 aa15.26■□□□□ 0.03
SMPD1-202ENST00000526280 STOX1Q6ZVD7 989 aa15.26■□□□□ 0.03
SMPD1-202ENST00000526280 ZSWIM5Q9P217 1185 aa15.26■□□□□ 0.03
SMPD1-202ENST00000526280 SYNPO2Q9UMS6 1093 aa15.26■□□□□ 0.03
SMPD1-202ENST00000526280 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
SMPD1-202ENST00000526280 HSPA8P11142 646 aaKnown RBP15.25■□□□□ 0.03
SMPD1-202ENST00000526280 VCAM1P19320 739 aa15.25■□□□□ 0.03
SMPD1-202ENST00000526280 LBX1P52954 281 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms