RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 USP14P54578 494 aa20.54■□□□□ 0.88
LMX1B-203ENST00000526117 MKNK2Q9HBH9 465 aa20.54■□□□□ 0.88
LMX1B-203ENST00000526117 ZFYVE28Q9HCC9 887 aa20.54■□□□□ 0.88
LMX1B-203ENST00000526117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.54■□□□□ 0.88
LMX1B-203ENST00000526117 CRHR2Q13324 411 aa20.53■□□□□ 0.88
LMX1B-203ENST00000526117 MTMR2Q13614 643 aa20.53■□□□□ 0.88
LMX1B-203ENST00000526117 SEPT2Q15019 361 aa20.53■□□□□ 0.88
LMX1B-203ENST00000526117 RAB3GAP1Q15042 981 aa20.53■□□□□ 0.88
LMX1B-203ENST00000526117 USP17L2Q6R6M4 530 aa20.53■□□□□ 0.88
LMX1B-203ENST00000526117 IL25Q9H293 177 aa20.53■□□□□ 0.88
LMX1B-203ENST00000526117 KANSL2Q9H9L4 492 aa20.53■□□□□ 0.88
LMX1B-203ENST00000526117 ADGRA2Q96PE1 1338 aa20.53■□□□□ 0.88
LMX1B-203ENST00000526117 PDHXO00330 501 aa20.52■□□□□ 0.88
LMX1B-203ENST00000526117 MPHOSPH10O00566 681 aaKnown RBP20.52■□□□□ 0.88
LMX1B-203ENST00000526117 ORC4O43929 436 aa20.52■□□□□ 0.88
LMX1B-203ENST00000526117 TBC1D8O95759 1140 aa20.52■□□□□ 0.88
LMX1B-203ENST00000526117 HMGCS2P54868 508 aa20.52■□□□□ 0.88
LMX1B-203ENST00000526117 PABPC4Q13310 644 aaKnown RBP eCLIP20.52■□□□□ 0.88
LMX1B-203ENST00000526117 TAF1CQ15572 869 aaPredicted RBP20.52■□□□□ 0.88
LMX1B-203ENST00000526117 SKAP1Q86WV1 359 aa20.52■□□□□ 0.88
LMX1B-203ENST00000526117 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.52■□□□□ 0.88
LMX1B-203ENST00000526117 SH2D4AQ9H788 454 aa20.52■□□□□ 0.88
LMX1B-203ENST00000526117 SYNPO2Q9UMS6 1093 aa20.52■□□□□ 0.88
LMX1B-203ENST00000526117 IGKV6D-41A0A0C4DH26 115 aa20.51■□□□□ 0.87
LMX1B-203ENST00000526117 GPR25O00155 361 aa20.51■□□□□ 0.87
LMX1B-203ENST00000526117 TLR2O60603 784 aa20.51■□□□□ 0.87
LMX1B-203ENST00000526117 HOXA7P31268 230 aaPredicted RBP20.51■□□□□ 0.87
LMX1B-203ENST00000526117 GADL1Q6ZQY3 521 aa20.51■□□□□ 0.87
LMX1B-203ENST00000526117 ZNF444Q8N0Y2 327 aaPredicted RBP20.51■□□□□ 0.87
LMX1B-203ENST00000526117 PARK7Q99497 189 aaKnown RBP20.51■□□□□ 0.87
LMX1B-203ENST00000526117 TMOD4Q9NZQ9 345 aa20.51■□□□□ 0.87
LMX1B-203ENST00000526117 CTNNA3Q9UI47 895 aa20.51■□□□□ 0.87
LMX1B-203ENST00000526117 TSKSQ9UJT2 592 aa20.51■□□□□ 0.87
LMX1B-203ENST00000526117 ICA1Q05084 483 aa20.5■□□□□ 0.87
LMX1B-203ENST00000526117 SIAH1Q8IUQ4 282 aa20.5■□□□□ 0.87
LMX1B-203ENST00000526117 NEDD1Q8NHV4 660 aa20.5■□□□□ 0.87
LMX1B-203ENST00000526117 STAG1Q8WVM7 1258 aa20.5■□□□□ 0.87
LMX1B-203ENST00000526117 R3HDMLQ9H3Y0 253 aa20.5■□□□□ 0.87
LMX1B-203ENST00000526117 ARHGEF10LQ9HCE6 1279 aa20.5■□□□□ 0.87
LMX1B-203ENST00000526117 PNMA3Q9UL41 463 aa20.5■□□□□ 0.87
LMX1B-203ENST00000526117 TMX2Q9Y320 296 aa20.5■□□□□ 0.87
LMX1B-203ENST00000526117 PPP4R3BQ5MIZ7 849 aa20.49■□□□□ 0.87
LMX1B-203ENST00000526117 TNS4Q8IZW8 715 aa20.49■□□□□ 0.87
LMX1B-203ENST00000526117 ACER1Q8TDN7 264 aa20.49■□□□□ 0.87
LMX1B-203ENST00000526117 LPAR1Q92633 364 aa20.49■□□□□ 0.87
LMX1B-203ENST00000526117 EMILIN3Q9NT22 766 aa20.49■□□□□ 0.87
LMX1B-203ENST00000526117 NYAP2Q9P242 653 aa20.49■□□□□ 0.87
LMX1B-203ENST00000526117 A0A1W2PRG0 241 aa20.48■□□□□ 0.87
LMX1B-203ENST00000526117 CTDSPL2Q05D32 466 aa20.48■□□□□ 0.87
LMX1B-203ENST00000526117 TREML2Q5T2D2 321 aa20.48■□□□□ 0.87
LMX1B-203ENST00000526117 C17orf99Q6UX52 265 aa20.48■□□□□ 0.87
LMX1B-203ENST00000526117 FEZ1Q99689 392 aa20.48■□□□□ 0.87
LMX1B-203ENST00000526117 NBPF3Q9H094 633 aa20.48■□□□□ 0.87
LMX1B-203ENST00000526117 RNF41Q9H4P4 317 aaPredicted RBP20.48■□□□□ 0.87
LMX1B-203ENST00000526117 ZNF213O14771 459 aa20.47■□□□□ 0.87
LMX1B-203ENST00000526117 FKTNO75072 461 aa20.47■□□□□ 0.87
LMX1B-203ENST00000526117 NOVP48745 357 aa20.47■□□□□ 0.87
LMX1B-203ENST00000526117 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
LMX1B-203ENST00000526117 AKNAD1Q5T1N1 836 aa20.47■□□□□ 0.87
LMX1B-203ENST00000526117 ZNF296Q8WUU4 475 aaPredicted RBP20.47■□□□□ 0.87
LMX1B-203ENST00000526117 MKL1Q969V6 931 aa20.47■□□□□ 0.87
LMX1B-203ENST00000526117 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
LMX1B-203ENST00000526117 MTMR4Q9NYA4 1195 aa20.47■□□□□ 0.87
LMX1B-203ENST00000526117 TACC3Q9Y6A5 838 aa20.47■□□□□ 0.87
LMX1B-203ENST00000526117 CDC45O75419 566 aa20.46■□□□□ 0.87
LMX1B-203ENST00000526117 PRDM1O75626 825 aa20.46■□□□□ 0.87
LMX1B-203ENST00000526117 TSPY3P0CV98 308 aa20.46■□□□□ 0.87
LMX1B-203ENST00000526117 TSPY8P0CW00 308 aa20.46■□□□□ 0.87
LMX1B-203ENST00000526117 EEF2P13639 858 aaKnown RBP20.46■□□□□ 0.87
LMX1B-203ENST00000526117 OSBPP22059 807 aa20.46■□□□□ 0.87
LMX1B-203ENST00000526117 CASC1Q6TDU7 716 aa20.46■□□□□ 0.87
LMX1B-203ENST00000526117 MAP4K1Q92918 833 aa20.46■□□□□ 0.87
LMX1B-203ENST00000526117 VCPKMTQ9H867 229 aa20.46■□□□□ 0.87
LMX1B-203ENST00000526117 U3KPZ7 1027 aaPredicted RBP20.46■□□□□ 0.87
LMX1B-203ENST00000526117 BCRP11274 1271 aa20.45■□□□□ 0.86
LMX1B-203ENST00000526117 VCAM1P19320 739 aa20.45■□□□□ 0.86
LMX1B-203ENST00000526117 GCLCP48506 637 aaPredicted RBP20.45■□□□□ 0.86
LMX1B-203ENST00000526117 TFAP4Q01664 338 aa20.45■□□□□ 0.86
LMX1B-203ENST00000526117 MFSD6Q6ZSS7 791 aa20.45■□□□□ 0.86
LMX1B-203ENST00000526117 GTF3C2Q8WUA4 911 aaPredicted RBP20.45■□□□□ 0.86
LMX1B-203ENST00000526117 ASCC2Q9H1I8 757 aaPredicted RBP20.45■□□□□ 0.86
LMX1B-203ENST00000526117 TCP11L1Q9NUJ3 509 aa20.45■□□□□ 0.86
LMX1B-203ENST00000526117 USP17L15C9J2P7 530 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 USP17L13C9JLJ4 530 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 USP17L11C9JVI0 530 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 USP17L18D6R9N7 530 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 USP17L22D6RA61 530 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 USP17L17D6RBQ6 530 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 USP17L19D6RCP7 530 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 USP17L20D6RJB6 530 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 TTLL1O95922 423 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 SP3Q02447 781 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 PTH1RQ03431 593 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 USP17L24Q0WX57 530 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 DGKZQ13574 1117 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 LBX2Q6XYB7 198 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 TBC1D10CQ8IV04 446 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 STK11IPQ8N1F8 1099 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 CEP95Q96GE4 821 aa20.44■□□□□ 0.86
LMX1B-203ENST00000526117 TSPY2A6NKD2 308 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms