RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 SLAIN1Q8ND83 568 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 FEZ1Q99689 392 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 PAGR1Q9BTK6 254 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 PUS7LQ9H0K6 701 aaKnown RBP14.57□□□□□ -0.08
SSBP3-210ENST00000525990 RNF208Q9H0X6 261 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 GINM1Q9NU53 330 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 RBPJLQ9UBG7 517 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 MORF4L1Q9UBU8 362 aa14.57□□□□□ -0.08
SSBP3-210ENST00000525990 A0A1W2PRG0 241 aa14.56□□□□□ -0.08
SSBP3-210ENST00000525990 USP17L2Q6R6M4 530 aa14.56□□□□□ -0.08
SSBP3-210ENST00000525990 COA7Q96BR5 231 aa14.56□□□□□ -0.08
SSBP3-210ENST00000525990 PORCNQ9H237 461 aa14.56□□□□□ -0.08
SSBP3-210ENST00000525990 ECHDC1Q9NTX5 307 aa14.56□□□□□ -0.08
SSBP3-210ENST00000525990 GJD2Q9UKL4 321 aa14.56□□□□□ -0.08
SSBP3-210ENST00000525990 MYH4Q9Y623 1939 aa14.56□□□□□ -0.08
SSBP3-210ENST00000525990 MPHOSPH10O00566 681 aaKnown RBP14.55□□□□□ -0.08
SSBP3-210ENST00000525990 CNMDO75829 334 aa14.55□□□□□ -0.08
SSBP3-210ENST00000525990 VCAM1P19320 739 aa14.55□□□□□ -0.08
SSBP3-210ENST00000525990 IRF5Q13568 498 aa14.55□□□□□ -0.08
SSBP3-210ENST00000525990 KIAA1755Q5JYT7 1200 aa14.55□□□□□ -0.08
SSBP3-210ENST00000525990 C12orf42Q96LP6 360 aa14.55□□□□□ -0.08
SSBP3-210ENST00000525990 CRBNQ96SW2 442 aa14.55□□□□□ -0.08
SSBP3-210ENST00000525990 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.55□□□□□ -0.088e-7■■■■□ 20.1
SSBP3-210ENST00000525990 KIAA1683Q9H0B3 1180 aa14.55□□□□□ -0.08
SSBP3-210ENST00000525990 USP17L12C9JPN9 530 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 USP17L21D6R901 530 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 GJB1P08034 283 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 AKR1B1P15121 316 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 GJA8P48165 433 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 ERVK-9P63128 1117 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 ERVK-24P63145 666 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 UBXN2AP68543 259 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 UBE3CQ15386 1083 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 PXYLP1Q8TE99 480 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 U2AF1L4Q8WU68 220 aaKnown RBP14.54□□□□□ -0.08
SSBP3-210ENST00000525990 CABP5Q9NP86 173 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 SLC4A4Q9Y6R1 1079 aa14.54□□□□□ -0.08
SSBP3-210ENST00000525990 C12orf60Q5U649 245 aa14.53□□□□□ -0.08
SSBP3-210ENST00000525990 UBE2Q1Q7Z7E8 422 aa14.53□□□□□ -0.08
SSBP3-210ENST00000525990 SIAH1Q8IUQ4 282 aa14.53□□□□□ -0.08
SSBP3-210ENST00000525990 GPRC5AQ8NFJ5 357 aa14.53□□□□□ -0.08
SSBP3-210ENST00000525990 TRIB2Q92519 343 aa14.53□□□□□ -0.08
SSBP3-210ENST00000525990 OSBP2Q969R2 916 aa14.53□□□□□ -0.08
SSBP3-210ENST00000525990 RPAP3Q9H6T3 665 aaPredicted RBP14.53□□□□□ -0.08
SSBP3-210ENST00000525990 ATP8A2Q9NTI2 1148 aa14.53□□□□□ -0.08
SSBP3-210ENST00000525990 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
SSBP3-210ENST00000525990 USP17L15C9J2P7 530 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 USP17L13C9JLJ4 530 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 USP17L11C9JVI0 530 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 USP17L18D6R9N7 530 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 USP17L22D6RA61 530 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 USP17L17D6RBQ6 530 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 USP17L19D6RCP7 530 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 USP17L20D6RJB6 530 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 SLC34A2O95436 690 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 CYP2B6P20813 491 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 CDK8P49336 464 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 USP17L24Q0WX57 530 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 CTR9Q6PD62 1173 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 CATSPERGQ6ZRH7 1159 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 STK11IPQ8N1F8 1099 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 KBTBD3Q8NAB2 608 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 DEFB118Q96PH6 123 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 BTBD7Q9P203 1132 aa14.52□□□□□ -0.09
SSBP3-210ENST00000525990 SPDYE16A6NNV3 312 aaPredicted RBP14.51□□□□□ -0.09
SSBP3-210ENST00000525990 M0R2C6 588 aa14.51□□□□□ -0.09
SSBP3-210ENST00000525990 SGPL1O95470 568 aa14.51□□□□□ -0.09
SSBP3-210ENST00000525990 CCL14Q16627 93 aa14.51□□□□□ -0.09
SSBP3-210ENST00000525990 GPR142Q7Z601 462 aa14.51□□□□□ -0.09
SSBP3-210ENST00000525990 PI4K2BQ8TCG2 481 aa14.51□□□□□ -0.09
SSBP3-210ENST00000525990 STRBPQ96SI9 672 aaKnown RBP14.51□□□□□ -0.09
SSBP3-210ENST00000525990 SEC62Q99442 399 aaKnown RBP14.51□□□□□ -0.09
SSBP3-210ENST00000525990 EPB41L4AQ9HCS5 686 aaPredicted RBP14.51□□□□□ -0.09
SSBP3-210ENST00000525990 PAK6Q9NQU5 681 aaPredicted RBP14.51□□□□□ -0.09
SSBP3-210ENST00000525990 GSG1L2A8MUP6 293 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 HMGCRP04035 888 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 USP14P54578 494 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 ZSCAN25Q6NSZ9 544 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 TMEM179Q6ZVK1 233 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 C16orf86Q6ZW13 317 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 SPICE1Q8N0Z3 855 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.5□□□□□ -0.094e-6■■■□□ 16.4
SSBP3-210ENST00000525990 SWAP70Q9UH65 585 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 PLXNA1Q9UIW2 1896 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 ZNF236Q9UL36 1845 aa14.5□□□□□ -0.09
SSBP3-210ENST00000525990 SALL3Q9BXA9 1300 aa14.49□□□□□ -0.09
SSBP3-210ENST00000525990 H0YGN5 161 aa14.49□□□□□ -0.09
SSBP3-210ENST00000525990 RNF113AO15541 343 aaKnown RBP14.49□□□□□ -0.09
SSBP3-210ENST00000525990 FARP2O94887 1054 aaPredicted RBP14.49□□□□□ -0.09
SSBP3-210ENST00000525990 ICA1Q05084 483 aa14.49□□□□□ -0.09
SSBP3-210ENST00000525990 MORN1Q5T089 497 aa14.49□□□□□ -0.09
SSBP3-210ENST00000525990 NKX2-3Q8TAU0 364 aa14.49□□□□□ -0.09
SSBP3-210ENST00000525990 DIS3LQ8TF46 1054 aaKnown RBP14.49□□□□□ -0.09
SSBP3-210ENST00000525990 APPBP2Q92624 585 aa14.49□□□□□ -0.09
SSBP3-210ENST00000525990 USP6NLQ92738 828 aa14.49□□□□□ -0.09
SSBP3-210ENST00000525990 GPATCH3Q96I76 525 aa14.49□□□□□ -0.09
SSBP3-210ENST00000525990 GPAA1O43292 621 aa14.48□□□□□ -0.09
SSBP3-210ENST00000525990 TFRCP02786 760 aaKnown RBP14.48□□□□□ -0.09
SSBP3-210ENST00000525990 MAPK4P31152 587 aa14.48□□□□□ -0.09
SSBP3-210ENST00000525990 WDR78Q5VTH9 848 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms