RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 SLC44A5Q8NCS7 719 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 ACER1Q8TDN7 264 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 DYNLL2Q96FJ2 89 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
RBBP4-216ENST00000525506 CCL5P13501 91 aa12.59□□□□□ -0.39
RBBP4-216ENST00000525506 GCLCP48506 637 aaPredicted RBP12.59□□□□□ -0.39
RBBP4-216ENST00000525506 GABPAQ06546 454 aa12.59□□□□□ -0.39
RBBP4-216ENST00000525506 USP17L2Q6R6M4 530 aa12.59□□□□□ -0.39
RBBP4-216ENST00000525506 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
RBBP4-216ENST00000525506 FEZ1Q99689 392 aa12.59□□□□□ -0.39
RBBP4-216ENST00000525506 TXNRD2Q9NNW7 524 aa12.59□□□□□ -0.39
RBBP4-216ENST00000525506 HOXA7P31268 230 aaPredicted RBP12.58□□□□□ -0.4
RBBP4-216ENST00000525506 HERVK_113P62684 666 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 NUCB1Q02818 461 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 SEPT2Q15019 361 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 PRPF38BQ5VTL8 546 aaKnown RBP12.58□□□□□ -0.4
RBBP4-216ENST00000525506 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 COA7Q96BR5 231 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 SHISA4Q96DD7 197 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 PUS7LQ9H0K6 701 aaKnown RBP12.58□□□□□ -0.4
RBBP4-216ENST00000525506 RNF208Q9H0X6 261 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 UNC93B1Q9H1C4 597 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 CABP5Q9NP86 173 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 ATP8A2Q9NTI2 1148 aa12.58□□□□□ -0.4
RBBP4-216ENST00000525506 MPHOSPH10O00566 681 aaKnown RBP12.57□□□□□ -0.4
RBBP4-216ENST00000525506 IGHDP01880 384 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 INHAP05111 366 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 PDE1AP54750 535 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 Q3C1V9 767 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 CHD1LQ86WJ1 897 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 CLEC10AQ8IUN9 316 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 OTUD7AQ8TE49 926 aaPredicted RBP12.57□□□□□ -0.4
RBBP4-216ENST00000525506 APPBP2Q92624 585 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 PAGR1Q9BTK6 254 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 OSBPL3Q9H4L5 887 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 RBPJLQ9UBG7 517 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 MORF4L1Q9UBU8 362 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 SLC4A4Q9Y6R1 1079 aa12.57□□□□□ -0.4
RBBP4-216ENST00000525506 A0A1W2PRG0 241 aa12.56□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L12C9JPN9 530 aa12.56□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L21D6R901 530 aa12.56□□□□□ -0.4
RBBP4-216ENST00000525506 UBXN2AP68543 259 aa12.56□□□□□ -0.4
RBBP4-216ENST00000525506 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
RBBP4-216ENST00000525506 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
RBBP4-216ENST00000525506 RLFQ13129 1914 aa12.56□□□□□ -0.4
RBBP4-216ENST00000525506 RNF113AO15541 343 aaKnown RBP12.55□□□□□ -0.4
RBBP4-216ENST00000525506 AKR1B1P15121 316 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 GNAT2P19087 354 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 VCAM1P19320 739 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 TRIM32Q13049 653 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 IRF5Q13568 498 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 KIAA1755Q5JYT7 1200 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 STK11IPQ8N1F8 1099 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 GPRC5AQ8NFJ5 357 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 OSBP2Q969R2 916 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 EVI5LQ96CN4 794 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 C12orf42Q96LP6 360 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 LNPKQ9C0E8 428 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 KIAA1683Q9H0B3 1180 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 PORCNQ9H237 461 aa12.55□□□□□ -0.4
RBBP4-216ENST00000525506 COL11A1P12107 1806 aaPredicted RBP12.54□□□□□ -0.4
RBBP4-216ENST00000525506 PARP14Q460N5 1801 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L15C9J2P7 530 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L13C9JLJ4 530 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L11C9JVI0 530 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L18D6R9N7 530 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L22D6RA61 530 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L17D6RBQ6 530 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L19D6RCP7 530 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L20D6RJB6 530 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 CNMDO75829 334 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 GJB1P08034 283 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 CYP2B6P20813 491 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 GJA8P48165 433 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 CDK8P49336 464 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP14P54578 494 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 ERVK-9P63128 1117 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 ERVK-24P63145 666 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 USP17L24Q0WX57 530 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 CTR9Q6PD62 1173 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 AMOTL1Q8IY63 956 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 PXYLP1Q8TE99 480 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 STRBPQ96SI9 672 aaKnown RBP12.54□□□□□ -0.4
RBBP4-216ENST00000525506 RPAP3Q9H6T3 665 aaPredicted RBP12.54□□□□□ -0.4
RBBP4-216ENST00000525506 CEP290O15078 2479 aa12.54□□□□□ -0.4
RBBP4-216ENST00000525506 ZNFX1Q9P2E3 1918 aaKnown RBP12.53□□□□□ -0.4
RBBP4-216ENST00000525506 SIAH1Q8IUQ4 282 aa12.53□□□□□ -0.4
RBBP4-216ENST00000525506 U2AF1L4Q8WU68 220 aaKnown RBP12.53□□□□□ -0.4
RBBP4-216ENST00000525506 DEFB118Q96PH6 123 aa12.53□□□□□ -0.4
RBBP4-216ENST00000525506 FSD1Q9BTV5 496 aa12.53□□□□□ -0.4
RBBP4-216ENST00000525506 ARPP21Q9UBL0 812 aaPredicted RBP12.53□□□□□ -0.4
RBBP4-216ENST00000525506 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
RBBP4-216ENST00000525506 MYH4Q9Y623 1939 aa12.52□□□□□ -0.4
RBBP4-216ENST00000525506 GSG1L2A8MUP6 293 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 M0R2C6 588 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 GPAA1O43292 621 aa12.52□□□□□ -0.41
RBBP4-216ENST00000525506 SGPL1O95470 568 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms