RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 APBA2Q99767 749 aa29.18■■■□□ 2.26
USP47-205ENST00000525257 EHD4Q9H223 541 aa29.18■■■□□ 2.26
USP47-205ENST00000525257 USP17L15C9J2P7 530 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 USP17L13C9JLJ4 530 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 USP17L11C9JVI0 530 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 USP17L18D6R9N7 530 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 USP17L22D6RA61 530 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 USP17L17D6RBQ6 530 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 USP17L19D6RCP7 530 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 USP17L20D6RJB6 530 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 USP17L24Q0WX57 530 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 MAP3K12Q12852 859 aa29.17■■■□□ 2.26
USP47-205ENST00000525257 CNMDO75829 334 aa29.16■■■□□ 2.26
USP47-205ENST00000525257 CERKLQ49MI3 558 aaPredicted RBP29.16■■■□□ 2.26
USP47-205ENST00000525257 CEP85Q6P2H3 762 aa29.16■■■□□ 2.26
USP47-205ENST00000525257 TTC6Q86TZ1 520 aa29.16■■■□□ 2.26
USP47-205ENST00000525257 AACSQ86V21 672 aa29.16■■■□□ 2.26
USP47-205ENST00000525257 EXOC6BQ9Y2D4 811 aa29.16■■■□□ 2.26
USP47-205ENST00000525257 RABGAP1Q9Y3P9 1069 aa29.16■■■□□ 2.26
USP47-205ENST00000525257 COL6A3P12111 3177 aa29.15■■■□□ 2.26
USP47-205ENST00000525257 MAGEA10P43363 369 aaPredicted RBP29.15■■■□□ 2.26
USP47-205ENST00000525257 USP14P54578 494 aa29.15■■■□□ 2.26
USP47-205ENST00000525257 ABCB5Q2M3G0 1257 aa29.15■■■□□ 2.26
USP47-205ENST00000525257 WDR78Q5VTH9 848 aa29.15■■■□□ 2.26
USP47-205ENST00000525257 ACER1Q8TDN7 264 aa29.15■■■□□ 2.26
USP47-205ENST00000525257 NAV1Q8NEY1 1877 aa29.14■■■□□ 2.26
USP47-205ENST00000525257 VCAM1P19320 739 aa29.14■■■□□ 2.26
USP47-205ENST00000525257 CCNA1P78396 465 aa29.14■■■□□ 2.26
USP47-205ENST00000525257 MAP2K5Q13163 448 aa29.14■■■□□ 2.26
USP47-205ENST00000525257 LHX8Q68G74 356 aa29.14■■■□□ 2.26
USP47-205ENST00000525257 KIAA1683Q9H0B3 1180 aa29.14■■■□□ 2.26
USP47-205ENST00000525257 FRMPD3Q5JV73 1810 aa29.13■■■□□ 2.25
USP47-205ENST00000525257 PLCD1P51178 756 aa29.13■■■□□ 2.25
USP47-205ENST00000525257 HNRNPUQ00839 825 aaKnown RBP eCLIP29.13■■■□□ 2.25
USP47-205ENST00000525257 CATSPERGQ6ZRH7 1159 aa29.13■■■□□ 2.25
USP47-205ENST00000525257 CABP5Q9NP86 173 aa29.13■■■□□ 2.25
USP47-205ENST00000525257 GLRX3O76003 335 aaKnown RBP29.12■■■□□ 2.25
USP47-205ENST00000525257 COL6A1P12109 1028 aa29.12■■■□□ 2.25
USP47-205ENST00000525257 SHMT1P34896 483 aa29.12■■■□□ 2.25
USP47-205ENST00000525257 ERC1Q8IUD2 1116 aa29.12■■■□□ 2.25
USP47-205ENST00000525257 EDC3Q96F86 508 aaKnown RBP29.12■■■□□ 2.25
USP47-205ENST00000525257 RIOK1Q9BRS2 568 aaKnown RBP29.12■■■□□ 2.25
USP47-205ENST00000525257 POLR3DP05423 398 aaPredicted RBP29.1■■■□□ 2.25
USP47-205ENST00000525257 TMED8Q6PL24 325 aaPredicted RBP29.1■■■□□ 2.25
USP47-205ENST00000525257 SLC17A8Q8NDX2 589 aa29.1■■■□□ 2.25
USP47-205ENST00000525257 RPAP3Q9H6T3 665 aaPredicted RBP29.1■■■□□ 2.25
USP47-205ENST00000525257 IL1RAPL2Q9NP60 686 aa29.1■■■□□ 2.25
USP47-205ENST00000525257 FLRT1Q9NZU1 646 aa29.1■■■□□ 2.25
USP47-205ENST00000525257 BTBD7Q9P203 1132 aa29.1■■■□□ 2.25
USP47-205ENST00000525257 MAGEB6P1A0A0J9YX57 407 aa29.09■■■□□ 2.25
USP47-205ENST00000525257 PTPREP23469 700 aa29.09■■■□□ 2.25
USP47-205ENST00000525257 LRRC26Q2I0M4 334 aa29.09■■■□□ 2.25
USP47-205ENST00000525257 MFSD14CQ5VZR4 134 aa29.09■■■□□ 2.25
USP47-205ENST00000525257 TDHQ8IZJ6 230 aa29.09■■■□□ 2.25
USP47-205ENST00000525257 UBE2OQ9C0C9 1292 aaKnown RBP29.09■■■□□ 2.25
USP47-205ENST00000525257 SLC15A5A6NIM6 579 aa29.08■■■□□ 2.25
USP47-205ENST00000525257 SPDYE16A6NNV3 312 aaPredicted RBP29.08■■■□□ 2.25
USP47-205ENST00000525257 GUCY1A2P33402 732 aa29.08■■■□□ 2.25
USP47-205ENST00000525257 SEPT2Q15019 361 aa29.08■■■□□ 2.25
USP47-205ENST00000525257 LBX2Q6XYB7 198 aa29.08■■■□□ 2.25
USP47-205ENST00000525257 IVNS1ABPQ9Y6Y0 642 aa29.08■■■□□ 2.25
USP47-205ENST00000525257 EVX2Q03828 476 aa29.07■■■□□ 2.24
USP47-205ENST00000525257 PANK1Q8TE04 598 aa29.07■■■□□ 2.24
USP47-205ENST00000525257 DNAH12Q6ZR08 3092 aa29.06■■■□□ 2.24
USP47-205ENST00000525257 MPHOSPH10O00566 681 aaKnown RBP29.06■■■□□ 2.24
USP47-205ENST00000525257 PDE6AP16499 860 aa29.06■■■□□ 2.24
USP47-205ENST00000525257 TTF1Q15361 905 aaPredicted RBP29.06■■■□□ 2.24
USP47-205ENST00000525257 LRIT3Q3SXY7 679 aa29.06■■■□□ 2.24
USP47-205ENST00000525257 SLC9C2Q5TAH2 1124 aa29.06■■■□□ 2.24
USP47-205ENST00000525257 CRNKL1Q9BZJ0 848 aaKnown RBP29.06■■■□□ 2.24
USP47-205ENST00000525257 ATP2B2Q01814 1243 aa29.05■■■□□ 2.24
USP47-205ENST00000525257 GABPAQ06546 454 aa29.05■■■□□ 2.24
USP47-205ENST00000525257 GRB14Q14449 540 aa29.05■■■□□ 2.24
USP47-205ENST00000525257 Q7L0L9 218 aa29.05■■■□□ 2.24
USP47-205ENST00000525257 DEFB123Q8N688 67 aa29.05■■■□□ 2.24
USP47-205ENST00000525257 NPLOC4Q8TAT6 608 aa29.05■■■□□ 2.24
USP47-205ENST00000525257 RHPN1Q8TCX5 695 aa29.05■■■□□ 2.24
USP47-205ENST00000525257 MCM9Q9NXL9 1143 aa29.05■■■□□ 2.24
USP47-205ENST00000525257 CNGA1P29973 690 aa29.04■■■□□ 2.24
USP47-205ENST00000525257 GPR153Q6NV75 609 aa29.04■■■□□ 2.24
USP47-205ENST00000525257 DDX20Q9UHI6 824 aaKnown RBP29.04■■■□□ 2.24
USP47-205ENST00000525257 ZNF532Q9HCE3 1301 aa29.03■■■□□ 2.24
USP47-205ENST00000525257 APBB1O00213 710 aa29.03■■■□□ 2.24
USP47-205ENST00000525257 HOXC6P09630 235 aa29.03■■■□□ 2.24
USP47-205ENST00000525257 CYP2C19P33261 490 aa29.03■■■□□ 2.24
USP47-205ENST00000525257 MDM2Q00987 491 aaPredicted RBP29.03■■■□□ 2.24
USP47-205ENST00000525257 HSP90AB4PQ58FF6 505 aa29.03■■■□□ 2.24
USP47-205ENST00000525257 SDR42E1Q8WUS8 393 aa29.03■■■□□ 2.24
USP47-205ENST00000525257 DNAJC2Q99543 621 aaKnown RBP29.03■■■□□ 2.24
USP47-205ENST00000525257 SENP6Q9GZR1 1112 aaPredicted RBP29.03■■■□□ 2.24
USP47-205ENST00000525257 BCL11AQ9H165 835 aa29.03■■■□□ 2.24
USP47-205ENST00000525257 A0A1W2PRG0 241 aa29.02■■■□□ 2.24
USP47-205ENST00000525257 GOLIM4O00461 696 aa29.02■■■□□ 2.24
USP47-205ENST00000525257 TANGO6Q9C0B7 1094 aa29.02■■■□□ 2.24
USP47-205ENST00000525257 CYP2D6P10635 497 aa29.01■■■□□ 2.23
USP47-205ENST00000525257 LCORLQ8N3X6 602 aa29.01■■■□□ 2.23
USP47-205ENST00000525257 DLL1O00548 723 aa29■■■□□ 2.23
USP47-205ENST00000525257 COG2Q14746 738 aa29■■■□□ 2.23
USP47-205ENST00000525257 CLASRPQ8N2M8 674 aaKnown RBP29■■■□□ 2.23
USP47-205ENST00000525257 SLC44A5Q8NCS7 719 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms