RNA–Protein interactions for RNA: ENST00000524798.1

LTBP3-203, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-203ENST00000524798 USP17L17D6RBQ6 530 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 USP17L19D6RCP7 530 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 USP17L20D6RJB6 530 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 PEX10O60683 326 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 MAPK4P31152 587 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 ERVK-9P63128 1117 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 ERVK-24P63145 666 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 USP17L24Q0WX57 530 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 CATSPERGQ6ZRH7 1159 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 DEFB118Q96PH6 123 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 FEZ1Q99689 392 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.65■■□□□ 1.383e-7■■■■■ 29.5
LTBP3-203ENST00000524798 ARMT1Q9H993 441 aa23.65■■□□□ 1.38
LTBP3-203ENST00000524798 NAV1Q8NEY1 1877 aa23.64■■□□□ 1.38
LTBP3-203ENST00000524798 PLXNB2O15031 1838 aa23.64■■□□□ 1.38
LTBP3-203ENST00000524798 H0YGN5 161 aa23.64■■□□□ 1.37
LTBP3-203ENST00000524798 FARP2O94887 1054 aaPredicted RBP23.64■■□□□ 1.37
LTBP3-203ENST00000524798 XRCC5P13010 732 aaKnown RBP23.64■■□□□ 1.37
LTBP3-203ENST00000524798 EVX2Q03828 476 aa23.64■■□□□ 1.37
LTBP3-203ENST00000524798 UBE3CQ15386 1083 aa23.64■■□□□ 1.37
LTBP3-203ENST00000524798 NUDT12Q9BQG2 462 aa23.64■■□□□ 1.37
LTBP3-203ENST00000524798 HTATIP2Q9BUP3 242 aa23.64■■□□□ 1.37
LTBP3-203ENST00000524798 ATP8A2Q9NTI2 1148 aa23.64■■□□□ 1.37
LTBP3-203ENST00000524798 RABGAP1Q9Y3P9 1069 aa23.64■■□□□ 1.37
LTBP3-203ENST00000524798 VCAM1P19320 739 aa23.63■■□□□ 1.37
LTBP3-203ENST00000524798 ZYXQ15942 572 aaKnown RBP23.63■■□□□ 1.37
LTBP3-203ENST00000524798 SLFNL1Q499Z3 407 aa23.63■■□□□ 1.37
LTBP3-203ENST00000524798 LBX2Q6XYB7 198 aa23.63■■□□□ 1.37
LTBP3-203ENST00000524798 SOCS4Q8WXH5 440 aa23.63■■□□□ 1.37
LTBP3-203ENST00000524798 USP6NLQ92738 828 aa23.63■■□□□ 1.37
LTBP3-203ENST00000524798 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.63■■□□□ 1.37
LTBP3-203ENST00000524798 SWAP70Q9UH65 585 aa23.63■■□□□ 1.37
LTBP3-203ENST00000524798 RPTORQ8N122 1335 aa23.62■■□□□ 1.37
LTBP3-203ENST00000524798 MBD4O95243 580 aa23.62■■□□□ 1.37
LTBP3-203ENST00000524798 TFRCP02786 760 aaKnown RBP23.62■■□□□ 1.37
LTBP3-203ENST00000524798 SEPT2Q15019 361 aa23.62■■□□□ 1.37
LTBP3-203ENST00000524798 DPF3Q92784 378 aa23.62■■□□□ 1.37
LTBP3-203ENST00000524798 PORCNQ9H237 461 aa23.62■■□□□ 1.37
LTBP3-203ENST00000524798 DCTPP1Q9H773 170 aa23.62■■□□□ 1.37
LTBP3-203ENST00000524798 PRKAB2O43741 272 aa23.61■■□□□ 1.37
LTBP3-203ENST00000524798 SMARCA5O60264 1052 aaPredicted RBP23.61■■□□□ 1.37
LTBP3-203ENST00000524798 CNMDO75829 334 aa23.61■■□□□ 1.37
LTBP3-203ENST00000524798 CYP2D6P10635 497 aa23.61■■□□□ 1.37
LTBP3-203ENST00000524798 GPR142Q7Z601 462 aa23.61■■□□□ 1.37
LTBP3-203ENST00000524798 TRIB2Q92519 343 aa23.61■■□□□ 1.37
LTBP3-203ENST00000524798 PAGR1Q9BTK6 254 aa23.61■■□□□ 1.37
LTBP3-203ENST00000524798 PCDH10Q9P2E7 1040 aa23.61■■□□□ 1.37
LTBP3-203ENST00000524798 CEP290O15078 2479 aa23.61■■□□□ 1.37
LTBP3-203ENST00000524798 CYP2B6P20813 491 aa23.6■■□□□ 1.37
LTBP3-203ENST00000524798 TRIM32Q13049 653 aa23.6■■□□□ 1.37
LTBP3-203ENST00000524798 MORN1Q5T089 497 aa23.6■■□□□ 1.37
LTBP3-203ENST00000524798 MAP3K21Q5TCX8 1036 aa23.6■■□□□ 1.37
LTBP3-203ENST00000524798 TRMT44Q8IYL2 757 aaKnown RBP23.6■■□□□ 1.37
LTBP3-203ENST00000524798 HMX1Q9NP08 348 aaPredicted RBP23.6■■□□□ 1.37
LTBP3-203ENST00000524798 ECHDC1Q9NTX5 307 aa23.6■■□□□ 1.37
LTBP3-203ENST00000524798 COLQQ9Y215 455 aaPredicted RBP23.6■■□□□ 1.37
LTBP3-203ENST00000524798 A0A1W2PRG0 241 aa23.59■■□□□ 1.37
LTBP3-203ENST00000524798 CHGBP05060 677 aa23.59■■□□□ 1.37
LTBP3-203ENST00000524798 C12orf60Q5U649 245 aa23.59■■□□□ 1.37
LTBP3-203ENST00000524798 ZSCAN25Q6NSZ9 544 aa23.59■■□□□ 1.37
LTBP3-203ENST00000524798 TMEM179Q6ZVK1 233 aa23.59■■□□□ 1.37
LTBP3-203ENST00000524798 PLEKHH3Q7Z736 793 aa23.59■■□□□ 1.37
LTBP3-203ENST00000524798 SLC44A5Q8NCS7 719 aa23.59■■□□□ 1.37
LTBP3-203ENST00000524798 MPHOSPH10O00566 681 aaKnown RBP23.58■■□□□ 1.37
LTBP3-203ENST00000524798 CCNA1P78396 465 aa23.58■■□□□ 1.37
LTBP3-203ENST00000524798 CCAR1Q8IX12 1150 aaKnown RBP23.58■■□□□ 1.37
LTBP3-203ENST00000524798 ANKLE1Q8NAG6 615 aa23.58■■□□□ 1.37
LTBP3-203ENST00000524798 DYNLL2Q96FJ2 89 aa23.58■■□□□ 1.37
LTBP3-203ENST00000524798 RPAP3Q9H6T3 665 aaPredicted RBP23.58■■□□□ 1.37
LTBP3-203ENST00000524798 SPDYE16A6NNV3 312 aaPredicted RBP23.57■■□□□ 1.36
LTBP3-203ENST00000524798 RGS2P41220 211 aa23.57■■□□□ 1.36
LTBP3-203ENST00000524798 SIAH1Q8IUQ4 282 aa23.57■■□□□ 1.36
LTBP3-203ENST00000524798 CCDC17Q96LX7 622 aa23.57■■□□□ 1.36
LTBP3-203ENST00000524798 USP17L12C9JPN9 530 aa23.56■■□□□ 1.36
LTBP3-203ENST00000524798 USP17L21D6R901 530 aa23.56■■□□□ 1.36
LTBP3-203ENST00000524798 PUS7LQ9H0K6 701 aaKnown RBP23.56■■□□□ 1.36
LTBP3-203ENST00000524798 BTBD7Q9P203 1132 aa23.56■■□□□ 1.36
LTBP3-203ENST00000524798 NR2E3Q9Y5X4 410 aa23.56■■□□□ 1.36
LTBP3-203ENST00000524798 MYH7P12883 1935 aa23.56■■□□□ 1.36
LTBP3-203ENST00000524798 GLRX3O76003 335 aaKnown RBP23.55■■□□□ 1.36
LTBP3-203ENST00000524798 CDK8P49336 464 aa23.55■■□□□ 1.36
LTBP3-203ENST00000524798 COG2Q14746 738 aa23.55■■□□□ 1.36
LTBP3-203ENST00000524798 C16orf86Q6ZW13 317 aa23.55■■□□□ 1.36
LTBP3-203ENST00000524798 AMOTL1Q8IY63 956 aa23.55■■□□□ 1.36
LTBP3-203ENST00000524798 DDRGK1Q96HY6 314 aa23.55■■□□□ 1.36
LTBP3-203ENST00000524798 PAWRQ96IZ0 340 aaKnown RBP23.55■■□□□ 1.36
LTBP3-203ENST00000524798 APBA2Q99767 749 aa23.55■■□□□ 1.36
LTBP3-203ENST00000524798 HOXC10Q9NYD6 342 aa23.55■■□□□ 1.36
LTBP3-203ENST00000524798 SLC4A4Q9Y6R1 1079 aa23.55■■□□□ 1.36
LTBP3-203ENST00000524798 CYP2D7A0A087X1C5 515 aa23.54■■□□□ 1.36
LTBP3-203ENST00000524798 SMIM22K7EJ46 135 aa23.54■■□□□ 1.36
LTBP3-203ENST00000524798 PRKAR2AP13861 404 aaKnown RBP23.54■■□□□ 1.36
LTBP3-203ENST00000524798 AKR1B1P15121 316 aa23.54■■□□□ 1.36
LTBP3-203ENST00000524798 ZKSCAN1P17029 563 aaPredicted RBP23.54■■□□□ 1.36
LTBP3-203ENST00000524798 MAP2K5Q13163 448 aa23.54■■□□□ 1.36
LTBP3-203ENST00000524798 NECAB2Q7Z6G3 386 aa23.54■■□□□ 1.36
LTBP3-203ENST00000524798 KBTBD3Q8NAB2 608 aa23.54■■□□□ 1.36
LTBP3-203ENST00000524798 LPAR1Q92633 364 aa23.54■■□□□ 1.36
LTBP3-203ENST00000524798 OGDHLQ9ULD0 1010 aa23.54■■□□□ 1.36
LTBP3-203ENST00000524798 TMX2Q9Y320 296 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms