RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 AKR1B1P15121 316 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 FOSBP53539 338 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 SSRP1Q08945 709 aaKnown RBP13.69□□□□□ -0.22
CSTF3-205ENST00000524775 GRM4Q14833 912 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 PKN1Q16512 942 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 FOXD4L6Q3SYB3 417 aaPredicted RBP13.69□□□□□ -0.22
CSTF3-205ENST00000524775 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 FOXD4L3Q6VB84 417 aaPredicted RBP13.69□□□□□ -0.22
CSTF3-205ENST00000524775 TMTC3Q6ZXV5 915 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 USP48Q86UV5 1035 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 GPT2Q8TD30 523 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 NUP133Q8WUM0 1156 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 DHX36Q9H2U1 1008 aaKnown RBP13.69□□□□□ -0.22
CSTF3-205ENST00000524775 ATP6V1DQ9Y5K8 247 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 ATAD5Q96QE3 1844 aa13.69□□□□□ -0.22
CSTF3-205ENST00000524775 CCDC196A0A1B0GTZ2 297 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 GOLGA6L22H0YM25 854 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 H3BQV1 296 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 PRPF3O43395 683 aaKnown RBP13.68□□□□□ -0.22
CSTF3-205ENST00000524775 GADD45BO75293 160 aaPredicted RBP13.68□□□□□ -0.22
CSTF3-205ENST00000524775 MMP14P50281 582 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 TCP10Q12799 353 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 TNIP1Q15025 636 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 DLGAP5Q15398 846 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 FKBP1CQ5VVH2 108 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 TATDN1Q6P1N9 297 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 CPLX2Q6PUV4 134 aaKnown RBP13.68□□□□□ -0.22
CSTF3-205ENST00000524775 FOXP4Q8IVH2 680 aaPredicted RBP13.68□□□□□ -0.22
CSTF3-205ENST00000524775 CMTR1Q8N1G2 835 aaKnown RBP13.68□□□□□ -0.22
CSTF3-205ENST00000524775 SRBD1Q8N5C6 995 aaKnown RBP13.68□□□□□ -0.22
CSTF3-205ENST00000524775 JDP2Q8WYK2 163 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 CEP95Q96GE4 821 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 C8orf76Q96K31 380 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 ALG1Q9BT22 464 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 SLC26A6Q9BXS9 759 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
CSTF3-205ENST00000524775 ZSCAN16Q9H4T2 348 aaPredicted RBP13.68□□□□□ -0.22
CSTF3-205ENST00000524775 GDPD2Q9HCC8 539 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 RBM28Q9NW13 759 aaKnown RBP13.68□□□□□ -0.22
CSTF3-205ENST00000524775 PI4KBQ9UBF8 816 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 HDAC9Q9UKV0 1011 aa13.68□□□□□ -0.22
CSTF3-205ENST00000524775 CNTNAP5Q8WYK1 1306 aa13.67□□□□□ -0.22
CSTF3-205ENST00000524775 HLA-DOAP06340 250 aa13.67□□□□□ -0.22
CSTF3-205ENST00000524775 SKOR2Q2VWA4 1001 aaPredicted RBP13.67□□□□□ -0.22
CSTF3-205ENST00000524775 KRT40Q6A162 431 aa13.67□□□□□ -0.22
CSTF3-205ENST00000524775 PNMA1Q8ND90 353 aa13.67□□□□□ -0.22
CSTF3-205ENST00000524775 RNF26Q9BY78 433 aaPredicted RBP13.67□□□□□ -0.22
CSTF3-205ENST00000524775 MTMR4Q9NYA4 1195 aa13.67□□□□□ -0.22
CSTF3-205ENST00000524775 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
CSTF3-205ENST00000524775 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
CSTF3-205ENST00000524775 KIF28PB7ZC32 967 aa13.66□□□□□ -0.22
CSTF3-205ENST00000524775 RPS12P25398 132 aaKnown RBP13.66□□□□□ -0.22
CSTF3-205ENST00000524775 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
CSTF3-205ENST00000524775 RRP1BQ14684 758 aaKnown RBP13.66□□□□□ -0.22
CSTF3-205ENST00000524775 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
CSTF3-205ENST00000524775 FAM151AQ8WW52 585 aa13.66□□□□□ -0.22
CSTF3-205ENST00000524775 KAT14Q9H8E8 782 aa13.66□□□□□ -0.22
CSTF3-205ENST00000524775 ZNF541Q9H0D2 1346 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 CLRN2A0PK11 232 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 FAM196BA6NMK8 535 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 WNT10BO00744 389 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 DEXIO95424 95 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 EGFRP00533 1210 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 TOP1P11387 765 aaKnown RBP13.65□□□□□ -0.22
CSTF3-205ENST00000524775 JAG1P78504 1218 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
CSTF3-205ENST00000524775 SIAH1Q8IUQ4 282 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 STAG2Q8N3U4 1231 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 OGFOD1Q8N543 542 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 DPF2Q92785 391 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 CCDC17Q96LX7 622 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 MYOZ2Q9NPC6 264 aa13.65□□□□□ -0.22
CSTF3-205ENST00000524775 TFIP11Q9UBB9 837 aaKnown RBP13.65□□□□□ -0.22
CSTF3-205ENST00000524775 ELP1O95163 1332 aa13.64□□□□□ -0.23
CSTF3-205ENST00000524775 TCP10L2B9ZVM9 353 aa13.64□□□□□ -0.23
CSTF3-205ENST00000524775 VEGFAP15692 232 aaPredicted RBP13.64□□□□□ -0.23
CSTF3-205ENST00000524775 U2AF2P26368 475 aaKnown RBP eCLIP13.64□□□□□ -0.238e-35■■■■□ 24.6
CSTF3-205ENST00000524775 GMPSP49915 693 aaPredicted RBP13.64□□□□□ -0.23
CSTF3-205ENST00000524775 MAP3K10Q02779 954 aa13.64□□□□□ -0.23
CSTF3-205ENST00000524775 NBPF9Q3BBW0 867 aa13.64□□□□□ -0.23
CSTF3-205ENST00000524775 FAM83AQ86UY5 434 aa13.64□□□□□ -0.23
CSTF3-205ENST00000524775 CCDC82Q8N4S0 544 aa13.64□□□□□ -0.23
CSTF3-205ENST00000524775 CTCFLQ8NI51 663 aaPredicted RBP13.64□□□□□ -0.23
CSTF3-205ENST00000524775 WASF1Q92558 559 aa13.64□□□□□ -0.23
CSTF3-205ENST00000524775 SYT17Q9BSW7 474 aa13.64□□□□□ -0.23
CSTF3-205ENST00000524775 RCOR1Q9UKL0 485 aa13.64□□□□□ -0.23
CSTF3-205ENST00000524775 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
CSTF3-205ENST00000524775 CYTH3O43739 400 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 SNHG28P0DPA3 235 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 KRT85P78386 507 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 NPY5RQ15761 445 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 ATL3Q6DD88 541 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 RASGRP2Q7LDG7 609 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 CLEC10AQ8IUN9 316 aa13.63□□□□□ -0.23
CSTF3-205ENST00000524775 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms