RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 GTF3C2Q8WUA4 911 aaPredicted RBP7.9□□□□□ -1.14
NUP98-213ENST00000524563 TGFBRAP1Q8WUH2 860 aa7.9□□□□□ -1.14
NUP98-213ENST00000524563 EDC3Q96F86 508 aaKnown RBP7.9□□□□□ -1.14
NUP98-213ENST00000524563 FAM163AQ96GL9 167 aaPredicted RBP7.9□□□□□ -1.14
NUP98-213ENST00000524563 APBA2Q99767 749 aa7.9□□□□□ -1.14
NUP98-213ENST00000524563 NUDT12Q9BQG2 462 aa7.9□□□□□ -1.14
NUP98-213ENST00000524563 NBPF3Q9H094 633 aa7.9□□□□□ -1.14
NUP98-213ENST00000524563 C11orf49Q9H6J7 331 aa7.9□□□□□ -1.14
NUP98-213ENST00000524563 PAK6Q9NQU5 681 aaPredicted RBP7.9□□□□□ -1.14
NUP98-213ENST00000524563 PI4KBQ9UBF8 816 aa7.9□□□□□ -1.14
NUP98-213ENST00000524563 ZBTB21Q9ULJ3 1066 aa7.9□□□□□ -1.14
NUP98-213ENST00000524563 IVNS1ABPQ9Y6Y0 642 aa7.9□□□□□ -1.14
NUP98-213ENST00000524563 RPTORQ8N122 1335 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 GOLIM4O00461 696 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 SYN1P17600 705 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 ATP5JP18859 108 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 MAPK4P31152 587 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 RGS2P41220 211 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 HERVK_113P62684 666 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 CENPQQ7L2Z9 268 aaPredicted RBP7.89□□□□□ -1.15
NUP98-213ENST00000524563 UBE2Q1Q7Z7E8 422 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 SMC5Q8IY18 1101 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 TRMT44Q8IYL2 757 aaKnown RBP7.89□□□□□ -1.15
NUP98-213ENST00000524563 SLC17A8Q8NDX2 589 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 GPRC5AQ8NFJ5 357 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 TRIB2Q92519 343 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 DNAJC2Q99543 621 aaKnown RBP7.89□□□□□ -1.15
NUP98-213ENST00000524563 BOLA2Q9H3K6 86 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 STAP2Q9UGK3 403 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 LAMA4Q16363 1823 aa7.89□□□□□ -1.15
NUP98-213ENST00000524563 USP17L10C9JJH3 530 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 GLRX3O76003 335 aaKnown RBP7.88□□□□□ -1.15
NUP98-213ENST00000524563 CYP7A1P22680 504 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 BACE1P56817 501 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 ERVK-9P63128 1117 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 ERVK-24P63145 666 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 CCNA1P78396 465 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 TRIM32Q13049 653 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 RAB3GAP1Q15042 981 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 ANKRD45Q5TZF3 282 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 USP17L2Q6R6M4 530 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 SAMD1Q6SPF0 538 aaPredicted RBP7.88□□□□□ -1.15
NUP98-213ENST00000524563 MIGA1Q8NAN2 632 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 LRCH3Q96II8 777 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 HAUS7Q99871 368 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 UBE2OQ9C0C9 1292 aaKnown RBP7.88□□□□□ -1.15
NUP98-213ENST00000524563 CRISPLD2Q9H0B8 497 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 ECHDC1Q9NTX5 307 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 PAG1Q9NWQ8 432 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 PALD1Q9ULE6 856 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 CUL9Q8IWT3 2517 aa7.88□□□□□ -1.15
NUP98-213ENST00000524563 TTC41PQ6P2S7 1318 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 C19orf81C9J6K1 198 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 MPHOSPH10O00566 681 aaKnown RBP7.87□□□□□ -1.15
NUP98-213ENST00000524563 GH2P01242 217 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 MYCNP04198 464 aaPredicted RBP7.87□□□□□ -1.15
NUP98-213ENST00000524563 CHGBP05060 677 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 MX1P20591 662 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 CNGA1P29973 690 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 MAGEA10P43363 369 aaPredicted RBP7.87□□□□□ -1.15
NUP98-213ENST00000524563 MAP3K10Q02779 954 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 SH3D19Q5HYK7 790 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 MFSD14CQ5VZR4 134 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 GPR142Q7Z601 462 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 PLEKHH3Q7Z736 793 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 CERS3Q8IU89 383 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 MAGEB6Q8N7X4 407 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 PI4K2BQ8TCG2 481 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 LBHD1Q9BQE6 289 aaPredicted RBP7.87□□□□□ -1.15
NUP98-213ENST00000524563 WDR18Q9BV38 432 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 RWDD1Q9H446 243 aaPredicted RBP7.87□□□□□ -1.15
NUP98-213ENST00000524563 CABP5Q9NP86 173 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 GINM1Q9NU53 330 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 MORF4L1Q9UBU8 362 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 PRKAG2Q9UGJ0 569 aa7.87□□□□□ -1.15
NUP98-213ENST00000524563 GREB1LQ9C091 1923 aaPredicted RBP7.86□□□□□ -1.15
NUP98-213ENST00000524563 GBF1Q92538 1859 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 TCRBV5S4A2TA0A5A2 114 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 SOX1O00570 391 aaPredicted RBP7.86□□□□□ -1.15
NUP98-213ENST00000524563 PEX10O60683 326 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 IGSF3O75054 1194 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 POLR3DP05423 398 aaPredicted RBP7.86□□□□□ -1.15
NUP98-213ENST00000524563 PDE6AP16499 860 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 USP14P54578 494 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 DYNLL1P63167 89 aaKnown RBP7.86□□□□□ -1.15
NUP98-213ENST00000524563 MAP3K12Q12852 859 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 RRP1BQ14684 758 aaKnown RBP7.86□□□□□ -1.15
NUP98-213ENST00000524563 TTF1Q15361 905 aaPredicted RBP7.86□□□□□ -1.15
NUP98-213ENST00000524563 ABCB5Q2M3G0 1257 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 SHROOM1Q2M3G4 852 aaPredicted RBP7.86□□□□□ -1.15
NUP98-213ENST00000524563 SLFNL1Q499Z3 407 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 TDHQ8IZJ6 230 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 DEFB123Q8N688 67 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 P2RX7Q99572 595 aaKnown RBP7.86□□□□□ -1.15
NUP98-213ENST00000524563 TANGO6Q9C0B7 1094 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 LNPKQ9C0E8 428 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 DNAJC18Q9H819 358 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 SERPINB13Q9UIV8 391 aa7.86□□□□□ -1.15
NUP98-213ENST00000524563 ZNF532Q9HCE3 1301 aa7.85□□□□□ -1.15
NUP98-213ENST00000524563 USP17L15C9J2P7 530 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms