RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 CENPFP49454 3210 aa24.97■■□□□ 1.59
TRAPPC9-215ENST00000524162 SLC44A5Q8NCS7 719 aa24.97■■□□□ 1.59
TRAPPC9-215ENST00000524162 EMILIN3Q9NT22 766 aa24.97■■□□□ 1.59
TRAPPC9-215ENST00000524162 HPS5Q9UPZ3 1129 aa24.97■■□□□ 1.59
TRAPPC9-215ENST00000524162 CYP2D7A0A087X1C5 515 aa24.96■■□□□ 1.59
TRAPPC9-215ENST00000524162 TDO2P48775 406 aa24.96■■□□□ 1.59
TRAPPC9-215ENST00000524162 SEPT2Q15019 361 aa24.96■■□□□ 1.59
TRAPPC9-215ENST00000524162 FAM110CQ1W6H9 321 aa24.96■■□□□ 1.59
TRAPPC9-215ENST00000524162 GTF3C2Q8WUA4 911 aaPredicted RBP24.96■■□□□ 1.59
TRAPPC9-215ENST00000524162 ASCC2Q9H1I8 757 aaPredicted RBP24.96■■□□□ 1.59
TRAPPC9-215ENST00000524162 DOCK3Q8IZD9 2030 aa24.95■■□□□ 1.58
TRAPPC9-215ENST00000524162 TRIM6-TRIM34B2RNG4 842 aa24.95■■□□□ 1.58
TRAPPC9-215ENST00000524162 APPP05067 770 aa24.95■■□□□ 1.58
TRAPPC9-215ENST00000524162 CAP1Q01518 475 aa24.95■■□□□ 1.58
TRAPPC9-215ENST00000524162 ALX1Q15699 326 aa24.95■■□□□ 1.58
TRAPPC9-215ENST00000524162 MCMDC2Q4G0Z9 681 aa24.95■■□□□ 1.58
TRAPPC9-215ENST00000524162 FEZ1Q99689 392 aa24.95■■□□□ 1.58
TRAPPC9-215ENST00000524162 ZMYM6O95789 1325 aa24.94■■□□□ 1.58
TRAPPC9-215ENST00000524162 HIP1O00291 1037 aa24.94■■□□□ 1.58
TRAPPC9-215ENST00000524162 HOXD10P28358 340 aa24.94■■□□□ 1.58
TRAPPC9-215ENST00000524162 NAPBQ9H115 298 aa24.94■■□□□ 1.58
TRAPPC9-215ENST00000524162 SH2D4AQ9H788 454 aa24.94■■□□□ 1.58
TRAPPC9-215ENST00000524162 KANSL2Q9H9L4 492 aa24.94■■□□□ 1.58
TRAPPC9-215ENST00000524162 MPHOSPH10O00566 681 aaKnown RBP24.93■■□□□ 1.58
TRAPPC9-215ENST00000524162 AKR1B1P15121 316 aa24.93■■□□□ 1.58
TRAPPC9-215ENST00000524162 IRX3P78415 501 aaPredicted RBP24.93■■□□□ 1.58
TRAPPC9-215ENST00000524162 ACER1Q8TDN7 264 aa24.93■■□□□ 1.58
TRAPPC9-215ENST00000524162 LPAR1Q92633 364 aa24.93■■□□□ 1.58
TRAPPC9-215ENST00000524162 MORF4L1Q9UBU8 362 aa24.93■■□□□ 1.58
TRAPPC9-215ENST00000524162 ZSWIM8A7E2V4 1837 aa24.93■■□□□ 1.58
TRAPPC9-215ENST00000524162 KIAA0100Q14667 2235 aaKnown RBP24.93■■□□□ 1.58
TRAPPC9-215ENST00000524162 USP17L15C9J2P7 530 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 USP17L13C9JLJ4 530 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 USP17L11C9JVI0 530 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 USP17L18D6R9N7 530 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 USP17L22D6RA61 530 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 USP17L17D6RBQ6 530 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 USP17L19D6RCP7 530 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 USP17L20D6RJB6 530 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 SMIM22K7EJ46 135 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 FOXP2O15409 715 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 SLC3A2P08195 630 aaKnown RBP24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 PSMC4P43686 418 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 MFAP1P55081 439 aaKnown RBP24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 USP17L24Q0WX57 530 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 RILPL2Q969X0 211 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 ARHGEF10LQ9HCE6 1279 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 TMX2Q9Y320 296 aa24.92■■□□□ 1.58
TRAPPC9-215ENST00000524162 MINDY4BA8MYZ0 360 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 SDSP20132 328 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 RASA1P20936 1047 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 PDE4AP27815 886 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 FCGRTP55899 365 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 LBX2Q6XYB7 198 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 SIAH1Q8IUQ4 282 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 TRIM47Q96LD4 638 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 MKNK2Q9HBH9 465 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 ANAPC4Q9UJX5 808 aa24.91■■□□□ 1.58
TRAPPC9-215ENST00000524162 A0A0D9SFI3 127 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 A0A1W2PRG0 241 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 VCAM1P19320 739 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 HERVK_113P62684 666 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 ICA1Q05084 483 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 PDE4BQ07343 736 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 ARMC5Q96C12 935 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 FAM227BQ96M60 508 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 SRRDQ9UH36 339 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 SYNPO2Q9UMS6 1093 aa24.9■■□□□ 1.58
TRAPPC9-215ENST00000524162 RLFQ13129 1914 aa24.89■■□□□ 1.58
TRAPPC9-215ENST00000524162 CCDC85CA6NKD9 419 aa24.89■■□□□ 1.58
TRAPPC9-215ENST00000524162 CTGFP29279 349 aa24.89■■□□□ 1.58
TRAPPC9-215ENST00000524162 RGS19P49795 217 aa24.89■■□□□ 1.58
TRAPPC9-215ENST00000524162 CATSPERGQ6ZRH7 1159 aa24.89■■□□□ 1.58
TRAPPC9-215ENST00000524162 P2RX7Q99572 595 aaKnown RBP24.89■■□□□ 1.58
TRAPPC9-215ENST00000524162 ARHGAP39Q9C0H5 1083 aa24.89■■□□□ 1.58
TRAPPC9-215ENST00000524162 RBBP6Q7Z6E9 1792 aaKnown RBP24.89■■□□□ 1.57
TRAPPC9-215ENST00000524162 PLIN4Q96Q06 1357 aa24.89■■□□□ 1.57
TRAPPC9-215ENST00000524162 CCDC171Q6TFL3 1326 aa24.88■■□□□ 1.57
TRAPPC9-215ENST00000524162 MYH4Q9Y623 1939 aa24.88■■□□□ 1.57
TRAPPC9-215ENST00000524162 PPARAQ07869 468 aa24.88■■□□□ 1.57
TRAPPC9-215ENST00000524162 NMIQ13287 307 aaPredicted RBP24.88■■□□□ 1.57
TRAPPC9-215ENST00000524162 ANKRD13CQ8N6S4 541 aa24.88■■□□□ 1.57
TRAPPC9-215ENST00000524162 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.88■■□□□ 1.57
TRAPPC9-215ENST00000524162 PARP14Q460N5 1801 aa24.87■■□□□ 1.57
TRAPPC9-215ENST00000524162 CAPN15O75808 1086 aa24.87■■□□□ 1.57
TRAPPC9-215ENST00000524162 FMNL1O95466 1100 aaPredicted RBP24.87■■□□□ 1.57
TRAPPC9-215ENST00000524162 TTC22Q5TAA0 569 aa24.87■■□□□ 1.57
TRAPPC9-215ENST00000524162 CCDC129Q6ZRS4 1044 aa24.87■■□□□ 1.57
TRAPPC9-215ENST00000524162 ZNF444Q8N0Y2 327 aaPredicted RBP24.87■■□□□ 1.57
TRAPPC9-215ENST00000524162 VCPKMTQ9H867 229 aa24.87■■□□□ 1.57
TRAPPC9-215ENST00000524162 NYAP2Q9P242 653 aa24.87■■□□□ 1.57
TRAPPC9-215ENST00000524162 IGKV6D-41A0A0C4DH26 115 aa24.86■■□□□ 1.57
TRAPPC9-215ENST00000524162 FGRP09769 529 aa24.86■■□□□ 1.57
TRAPPC9-215ENST00000524162 HSPD1P10809 573 aaKnown RBP24.86■■□□□ 1.57
TRAPPC9-215ENST00000524162 NBPF11Q86T75 865 aa24.86■■□□□ 1.57
TRAPPC9-215ENST00000524162 RABGAP1Q9Y3P9 1069 aa24.86■■□□□ 1.57
TRAPPC9-215ENST00000524162 MYPNQ86TC9 1320 aa24.86■■□□□ 1.57
TRAPPC9-215ENST00000524162 PCP11498 1178 aaKnown RBP24.85■■□□□ 1.57
TRAPPC9-215ENST00000524162 EEF2P13639 858 aaKnown RBP24.85■■□□□ 1.57
TRAPPC9-215ENST00000524162 NT5C2P49902 561 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms