RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 FTOQ9C0B1 505 aaKnown RBP eCLIP9.47□□□□□ -0.89
CSMD1-213ENST00000523488 TTYH3Q9C0H2 523 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 GPR108Q9NPR9 543 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 CTAGE15A4D2H0 777 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 ABLIM1O14639 778 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 CTAGE8P0CG41 777 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 TTMPQ5BVD1 217 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 FBXO31Q5XUX0 539 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-213ENST00000523488 OLFM4Q6UX06 510 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 CTAGE6Q86UF2 777 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 CTAGE4Q8IX94 777 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 NECTIN2Q92692 538 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 HAUS7Q99871 368 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 SLC24A3Q9HC58 644 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 HELLSQ9NRZ9 838 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 A6NHS1 94 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 TRIM14Q14142 442 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 SLMAPQ14BN4 828 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 LRP10Q7Z4F1 713 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 FMNL3Q8IVF7 1028 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 ZFAND2BQ8WV99 257 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 N4BP2L2Q92802 583 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-213ENST00000523488 HOOK2Q96ED9 719 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 NAPGQ99747 312 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-213ENST00000523488 EPN3Q9H201 632 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 LZTFL1Q9NQ48 299 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 FAM184BQ9ULE4 1060 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 CLIC4Q9Y696 253 aa9.46□□□□□ -0.89
CSMD1-213ENST00000523488 A0A1B0GVL5 298 aa9.46□□□□□ -0.9
CSMD1-213ENST00000523488 Q6ZUG5 572 aa9.46□□□□□ -0.9
CSMD1-213ENST00000523488 FAM76AQ8TAV0 307 aa9.46□□□□□ -0.9
CSMD1-213ENST00000523488 CNKSR1Q969H4 720 aa9.46□□□□□ -0.9
CSMD1-213ENST00000523488 COG3Q96JB2 828 aa9.46□□□□□ -0.9
CSMD1-213ENST00000523488 DDX20Q9UHI6 824 aaKnown RBP9.46□□□□□ -0.9
CSMD1-213ENST00000523488 IRF6O14896 467 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 IFFO1Q0D2I5 559 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 PPP4R3AQ6IN85 833 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 CEP57Q86XR8 500 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 BCAS4Q8TDM0 211 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 COPRSQ9NQ92 184 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 SPTLC2O15270 562 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 SSR1P43307 286 aaKnown RBP9.45□□□□□ -0.9
CSMD1-213ENST00000523488 EIF4A1P60842 406 aaKnown RBP9.45□□□□□ -0.9
CSMD1-213ENST00000523488 ERVK-24P63145 666 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 SPDYCQ5MJ68 293 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 RNF217Q8TC41 542 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 EAF2Q96CJ1 260 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-213ENST00000523488 RBM33Q96EV2 1170 aaKnown RBP9.45□□□□□ -0.9
CSMD1-213ENST00000523488 ODF2LQ9ULJ1 636 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 CTAGE9A4FU28 777 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 ACTN4O43707 911 aaKnown RBP9.45□□□□□ -0.9
CSMD1-213ENST00000523488 GYPCP04921 128 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 HNRNPH3P31942 346 aaKnown RBP9.45□□□□□ -0.9
CSMD1-213ENST00000523488 PLCD1P51178 756 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 GDF3Q9NR23 364 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 KLC4Q9NSK0 619 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 MIS18AQ9NYP9 233 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 CCDC61Q9Y6R9 512 aa9.45□□□□□ -0.9
CSMD1-213ENST00000523488 KIF28PB7ZC32 967 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 AKR1B15C9JRZ8 316 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 GUCY1B3Q02153 619 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 FMR1Q06787 632 aaKnown RBP eCLIP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 PTPN21Q16825 1174 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 ANO1Q5XXA6 986 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 CLASRPQ8N2M8 674 aaKnown RBP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 IL17REQ8NFR9 667 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 ACSBG1Q96GR2 724 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 DESI2Q9BSY9 194 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 MYO6Q9UM54 1294 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 MAST2Q6P0Q8 1798 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 ZBTB48P10074 688 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 GGCXP38435 758 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 ZC3H12AQ5D1E8 599 aaKnown RBP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 ZNF569Q5MCW4 686 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 RNF187Q5TA31 235 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 SULT6B1Q6IMI4 303 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 EMBQ6PCB8 327 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 TMTC1Q8IUR5 882 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 CCDC148Q8NFR7 591 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 CAPS2Q9BXY5 557 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 TSPYL4Q9UJ04 414 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 MAN1B1Q9UKM7 699 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 A0A1B0GUA9 196 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 FESP07332 822 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 GSTA1P08263 222 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 CLNS1AP54105 237 aaKnown RBP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 GLE1Q53GS7 698 aaKnown RBP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 HSP90AA4PQ58FG1 418 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 MB21D2Q8IYB1 491 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 L3MBTL3Q96JM7 780 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-213ENST00000523488 CCDC134Q9H6E4 229 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 FANCLQ9NW38 375 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 SLC12A6Q9UHW9 1150 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 SLC12A4Q9UP95 1085 aa9.44□□□□□ -0.9
CSMD1-213ENST00000523488 TULP1O00294 542 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-213ENST00000523488 MYBL2P10244 700 aa9.43□□□□□ -0.9
CSMD1-213ENST00000523488 CENPTQ96BT3 561 aa9.43□□□□□ -0.9
CSMD1-213ENST00000523488 ZRANB1Q9UGI0 708 aa9.43□□□□□ -0.9
CSMD1-213ENST00000523488 KIF13AQ9H1H9 1805 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms