RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 SYAP1Q96A49 352 aaPredicted RBP24.11■■□□□ 1.45
SQLE-206ENST00000523430 PGBD1Q96JS3 809 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 SGIP1Q9BQI5 828 aa24.11■■□□□ 1.45
SQLE-206ENST00000523430 MYH6P13533 1939 aa24.1■■□□□ 1.45
SQLE-206ENST00000523430 PSDA5PKW4 1024 aaPredicted RBP24.1■■□□□ 1.45
SQLE-206ENST00000523430 CCDC178Q5BJE1 867 aa24.1■■□□□ 1.45
SQLE-206ENST00000523430 MYSM1Q5VVJ2 828 aa24.1■■□□□ 1.45
SQLE-206ENST00000523430 SRBD1Q8N5C6 995 aaKnown RBP24.1■■□□□ 1.45
SQLE-206ENST00000523430 UPF1Q92900 1129 aaKnown RBP eCLIP24.1■■□□□ 1.45
SQLE-206ENST00000523430 PLIN4Q96Q06 1357 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 PSMD14O00487 310 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 PKN1Q16512 942 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 ATL3Q6DD88 541 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 RSBN1LQ6PCB5 846 aaPredicted RBP24.09■■□□□ 1.45
SQLE-206ENST00000523430 SHISA4Q96DD7 197 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 TMEM47Q9BQJ4 181 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 FAM198AQ9UFP1 575 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 SERPINB13Q9UIV8 391 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 KCNJ14Q9UNX9 436 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 MYH8P13535 1937 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 TCP10Q12799 353 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 CFAP100Q494V2 611 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 CEP95Q96GE4 821 aa24.09■■□□□ 1.45
SQLE-206ENST00000523430 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.09■■□□□ 1.45
SQLE-206ENST00000523430 FER1L6Q2WGJ9 1857 aa24.08■■□□□ 1.45
SQLE-206ENST00000523430 PRPF3O43395 683 aaKnown RBP24.08■■□□□ 1.45
SQLE-206ENST00000523430 MMP1P03956 469 aa24.08■■□□□ 1.45
SQLE-206ENST00000523430 SLURP2P0DP57 97 aa24.08■■□□□ 1.45
SQLE-206ENST00000523430 RCOR1Q9UKL0 485 aa24.08■■□□□ 1.45
SQLE-206ENST00000523430 HLA-DOAP06340 250 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 LIG1P18858 919 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 AKAP17AQ02040 695 aaKnown RBP24.07■■□□□ 1.44
SQLE-206ENST00000523430 CCDC183Q5T5S1 534 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 RASGRP2Q7LDG7 609 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 IDI2Q9BXS1 227 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 CLIC4Q9Y696 253 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 V9GY48 417 aaPredicted RBP24.07■■□□□ 1.44
SQLE-206ENST00000523430 MYO3BQ8WXR4 1341 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 AKR1B1P15121 316 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 SHMT1P34896 483 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 GNL2Q13823 731 aaKnown RBP24.07■■□□□ 1.44
SQLE-206ENST00000523430 GRM4Q14833 912 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 L1TD1Q5T7N2 865 aaKnown RBP24.07■■□□□ 1.44
SQLE-206ENST00000523430 NIM1KQ8IY84 436 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 TDRD3Q9H7E2 651 aaKnown RBP24.07■■□□□ 1.44
SQLE-206ENST00000523430 RTEL1Q9NZ71 1219 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 ISY1Q9ULR0 285 aaKnown RBP24.07■■□□□ 1.44
SQLE-206ENST00000523430 MTMR7Q9Y216 660 aa24.07■■□□□ 1.44
SQLE-206ENST00000523430 GOLGA6L4A6NEF3 574 aa24.06■■□□□ 1.44
SQLE-206ENST00000523430 VIL1P09327 827 aaKnown RBP24.06■■□□□ 1.44
SQLE-206ENST00000523430 U2AF2P26368 475 aaKnown RBP eCLIP24.06■■□□□ 1.44
SQLE-206ENST00000523430 KIF5BP33176 963 aa24.06■■□□□ 1.44
SQLE-206ENST00000523430 STAG2Q8N3U4 1231 aa24.06■■□□□ 1.44
SQLE-206ENST00000523430 VPS33BQ9H267 617 aa24.06■■□□□ 1.44
SQLE-206ENST00000523430 VPS54Q9P1Q0 977 aa24.06■■□□□ 1.44
SQLE-206ENST00000523430 SWAP70Q9UH65 585 aa24.06■■□□□ 1.44
SQLE-206ENST00000523430 ZBTB12Q9Y330 459 aaPredicted RBP24.06■■□□□ 1.44
SQLE-206ENST00000523430 PTGER2P43116 358 aa24.05■■□□□ 1.44
SQLE-206ENST00000523430 DIS3L2Q8IYB7 885 aaKnown RBP24.05■■□□□ 1.44
SQLE-206ENST00000523430 PRMT6Q96LA8 375 aaPredicted RBP24.05■■□□□ 1.44
SQLE-206ENST00000523430 GMLQ99445 158 aa24.05■■□□□ 1.44
SQLE-206ENST00000523430 MAP3K14Q99558 947 aa24.05■■□□□ 1.44
SQLE-206ENST00000523430 TAOK3Q9H2K8 898 aa24.05■■□□□ 1.44
SQLE-206ENST00000523430 DNAJC18Q9H819 358 aa24.05■■□□□ 1.44
SQLE-206ENST00000523430 GRPEL1Q9HAV7 217 aa24.05■■□□□ 1.44
SQLE-206ENST00000523430 MAD2L2Q9UI95 211 aa24.05■■□□□ 1.44
SQLE-206ENST00000523430 ZNRF3Q9ULT6 936 aa24.05■■□□□ 1.44
SQLE-206ENST00000523430 DDTLA6NHG4 134 aaPredicted RBP24.04■■□□□ 1.44
SQLE-206ENST00000523430 SH3BP5LQ7L8J4 393 aa24.04■■□□□ 1.44
SQLE-206ENST00000523430 CLEC10AQ8IUN9 316 aa24.04■■□□□ 1.44
SQLE-206ENST00000523430 BICD2Q8TD16 824 aa24.04■■□□□ 1.44
SQLE-206ENST00000523430 EHD4Q9H223 541 aa24.04■■□□□ 1.44
SQLE-206ENST00000523430 POLR3EQ9NVU0 708 aa24.04■■□□□ 1.44
SQLE-206ENST00000523430 BTBD18B2RXH4 712 aa24.04■■□□□ 1.44
SQLE-206ENST00000523430 NOVP48745 357 aa24.04■■□□□ 1.44
SQLE-206ENST00000523430 LRSAM1Q6UWE0 723 aa24.04■■□□□ 1.44
SQLE-206ENST00000523430 GREB1LQ9C091 1923 aaPredicted RBP24.04■■□□□ 1.44
SQLE-206ENST00000523430 NFKBIEO00221 500 aa24.03■■□□□ 1.44
SQLE-206ENST00000523430 NASPP49321 788 aaPredicted RBP24.03■■□□□ 1.44
SQLE-206ENST00000523430 LINC00301Q8NCQ3 95 aa24.03■■□□□ 1.44
SQLE-206ENST00000523430 PIBF1Q8WXW3 757 aa24.03■■□□□ 1.44
SQLE-206ENST00000523430 CD2APQ9Y5K6 639 aa24.03■■□□□ 1.44
SQLE-206ENST00000523430 IGKV6D-41A0A0C4DH26 115 aa24.02■■□□□ 1.44
SQLE-206ENST00000523430 FAM196BA6NMK8 535 aa24.02■■□□□ 1.44
SQLE-206ENST00000523430 XRCC6P12956 609 aaKnown RBP eCLIP24.02■■□□□ 1.44
SQLE-206ENST00000523430 SAFBQ15424 915 aaKnown RBP eCLIP24.02■■□□□ 1.44
SQLE-206ENST00000523430 NOSTRINQ8IVI9 506 aa24.02■■□□□ 1.44
SQLE-206ENST00000523430 OXER1Q8TDS5 423 aa24.02■■□□□ 1.44
SQLE-206ENST00000523430 TOP1P11387 765 aaKnown RBP24.02■■□□□ 1.44
SQLE-206ENST00000523430 MRE11P49959 708 aa24.02■■□□□ 1.44
SQLE-206ENST00000523430 NR5A1Q13285 461 aa24.02■■□□□ 1.44
SQLE-206ENST00000523430 SLC35G1Q2M3R5 365 aa24.02■■□□□ 1.44
SQLE-206ENST00000523430 ANO1Q5XXA6 986 aa24.02■■□□□ 1.44
SQLE-206ENST00000523430 DHX36Q9H2U1 1008 aaKnown RBP24.02■■□□□ 1.44
SQLE-206ENST00000523430 BCS1LQ9Y276 419 aa24.02■■□□□ 1.44
SQLE-206ENST00000523430 SPDYE2BA6NHP3 402 aa24.01■■□□□ 1.43
SQLE-206ENST00000523430 NPM3O75607 178 aaKnown RBP24.01■■□□□ 1.43
SQLE-206ENST00000523430 YEATS4O95619 227 aa24.01■■□□□ 1.43
SQLE-206ENST00000523430 SPDYE6P0CI01 402 aa24.01■■□□□ 1.43
SQLE-206ENST00000523430 ME1P48163 572 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms