RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 USP17L17D6RBQ6 530 aa31.62■■■□□ 2.65
PVT1-219ENST00000523427 USP17L19D6RCP7 530 aa31.62■■■□□ 2.65
PVT1-219ENST00000523427 USP17L20D6RJB6 530 aa31.62■■■□□ 2.65
PVT1-219ENST00000523427 USP17L24Q0WX57 530 aa31.62■■■□□ 2.65
PVT1-219ENST00000523427 LHX8Q68G74 356 aa31.62■■■□□ 2.65
PVT1-219ENST00000523427 EAF2Q96CJ1 260 aaPredicted RBP31.62■■■□□ 2.65
PVT1-219ENST00000523427 EDC3Q96F86 508 aaKnown RBP31.62■■■□□ 2.65
PVT1-219ENST00000523427 MDM2Q00987 491 aaPredicted RBP31.61■■■□□ 2.65
PVT1-219ENST00000523427 MAP2K5Q13163 448 aa31.61■■■□□ 2.65
PVT1-219ENST00000523427 LRRC26Q2I0M4 334 aa31.61■■■□□ 2.65
PVT1-219ENST00000523427 ACER1Q8TDN7 264 aa31.61■■■□□ 2.65
PVT1-219ENST00000523427 SERPINB13Q9UIV8 391 aa31.61■■■□□ 2.65
PVT1-219ENST00000523427 RABGAP1Q9Y3P9 1069 aa31.61■■■□□ 2.65
PVT1-219ENST00000523427 CCER2I3L3R5 266 aa31.6■■■□□ 2.65
PVT1-219ENST00000523427 CNMDO75829 334 aa31.6■■■□□ 2.65
PVT1-219ENST00000523427 COL6A1P12109 1028 aa31.6■■■□□ 2.65
PVT1-219ENST00000523427 CCNA1P78396 465 aa31.6■■■□□ 2.65
PVT1-219ENST00000523427 CERKLQ49MI3 558 aaPredicted RBP31.6■■■□□ 2.65
PVT1-219ENST00000523427 ANTXR1Q9H6X2 564 aa31.6■■■□□ 2.65
PVT1-219ENST00000523427 COL6A3P12111 3177 aa31.59■■■□□ 2.65
PVT1-219ENST00000523427 GLRX3O76003 335 aaKnown RBP31.59■■■□□ 2.65
PVT1-219ENST00000523427 CNGA1P29973 690 aa31.59■■■□□ 2.65
PVT1-219ENST00000523427 ABCB5Q2M3G0 1257 aa31.59■■■□□ 2.65
PVT1-219ENST00000523427 TATDN1Q6P1N9 297 aa31.59■■■□□ 2.65
PVT1-219ENST00000523427 ITPRIPQ8IWB1 547 aa31.59■■■□□ 2.65
PVT1-219ENST00000523427 FTSJ3Q8IY81 847 aaKnown RBP31.59■■■□□ 2.65
PVT1-219ENST00000523427 FOCADQ5VW36 1801 aa31.59■■■□□ 2.65
PVT1-219ENST00000523427 LRIT3Q3SXY7 679 aa31.58■■■□□ 2.65
PVT1-219ENST00000523427 MFSD14CQ5VZR4 134 aa31.58■■■□□ 2.65
PVT1-219ENST00000523427 CATSPERGQ6ZRH7 1159 aa31.58■■■□□ 2.65
PVT1-219ENST00000523427 TTC6Q86TZ1 520 aa31.58■■■□□ 2.65
PVT1-219ENST00000523427 C12orf42Q96LP6 360 aa31.58■■■□□ 2.65
PVT1-219ENST00000523427 CABP5Q9NP86 173 aa31.58■■■□□ 2.65
PVT1-219ENST00000523427 FLRT1Q9NZU1 646 aa31.58■■■□□ 2.65
PVT1-219ENST00000523427 NOP58Q9Y2X3 529 aaKnown RBP31.58■■■□□ 2.65
PVT1-219ENST00000523427 VCAM1P19320 739 aa31.57■■■□□ 2.64
PVT1-219ENST00000523427 USP14P54578 494 aa31.57■■■□□ 2.64
PVT1-219ENST00000523427 SENP6Q9GZR1 1112 aaPredicted RBP31.57■■■□□ 2.64
PVT1-219ENST00000523427 MAP3K12Q12852 859 aa31.56■■■□□ 2.64
PVT1-219ENST00000523427 BTBD7Q9P203 1132 aa31.56■■■□□ 2.64
PVT1-219ENST00000523427 IVNS1ABPQ9Y6Y0 642 aa31.56■■■□□ 2.64
PVT1-219ENST00000523427 MYH1P12882 1939 aa31.55■■■□□ 2.64
PVT1-219ENST00000523427 IGSF3O75054 1194 aa31.55■■■□□ 2.64
PVT1-219ENST00000523427 PTPREP23469 700 aa31.55■■■□□ 2.64
PVT1-219ENST00000523427 ATP2B2Q01814 1243 aa31.55■■■□□ 2.64
PVT1-219ENST00000523427 GPR153Q6NV75 609 aa31.55■■■□□ 2.64
PVT1-219ENST00000523427 KIAA1683Q9H0B3 1180 aa31.55■■■□□ 2.64
PVT1-219ENST00000523427 RPAP3Q9H6T3 665 aaPredicted RBP31.55■■■□□ 2.64
PVT1-219ENST00000523427 POLR3DP05423 398 aaPredicted RBP31.54■■■□□ 2.64
PVT1-219ENST00000523427 PLCD1P51178 756 aa31.54■■■□□ 2.64
PVT1-219ENST00000523427 ATN1P54259 1190 aaPredicted RBP31.54■■■□□ 2.64
PVT1-219ENST00000523427 CERS3Q8IU89 383 aa31.54■■■□□ 2.64
PVT1-219ENST00000523427 BCL11AQ9H165 835 aa31.54■■■□□ 2.64
PVT1-219ENST00000523427 EHD4Q9H223 541 aa31.54■■■□□ 2.64
PVT1-219ENST00000523427 SLC15A5A6NIM6 579 aa31.53■■■□□ 2.64
PVT1-219ENST00000523427 CYP2C19P33261 490 aa31.53■■■□□ 2.64
PVT1-219ENST00000523427 AACSQ86V21 672 aa31.53■■■□□ 2.64
PVT1-219ENST00000523427 EXOC6BQ9Y2D4 811 aa31.53■■■□□ 2.64
PVT1-219ENST00000523427 A0A0C4DFX4 3053 aa31.52■■■□□ 2.64
PVT1-219ENST00000523427 MPHOSPH10O00566 681 aaKnown RBP31.52■■■□□ 2.64
PVT1-219ENST00000523427 SHMT1P34896 483 aa31.52■■■□□ 2.64
PVT1-219ENST00000523427 NPLOC4Q8TAT6 608 aa31.52■■■□□ 2.64
PVT1-219ENST00000523427 MTMR10Q9NXD2 777 aa31.52■■■□□ 2.64
PVT1-219ENST00000523427 DDX20Q9UHI6 824 aaKnown RBP31.52■■■□□ 2.64
PVT1-219ENST00000523427 RLBP1P12271 317 aa31.51■■■□□ 2.63
PVT1-219ENST00000523427 SEPT2Q15019 361 aa31.51■■■□□ 2.63
PVT1-219ENST00000523427 SPDYE16A6NNV3 312 aaPredicted RBP31.5■■■□□ 2.63
PVT1-219ENST00000523427 LBHD1Q9BQE6 289 aaPredicted RBP31.5■■■□□ 2.63
PVT1-219ENST00000523427 MAGEB6P1A0A0J9YX57 407 aa31.49■■■□□ 2.63
PVT1-219ENST00000523427 GUCY1A2P33402 732 aa31.49■■■□□ 2.63
PVT1-219ENST00000523427 EVX2Q03828 476 aa31.49■■■□□ 2.63
PVT1-219ENST00000523427 IL1RAPL2Q9NP60 686 aa31.49■■■□□ 2.63
PVT1-219ENST00000523427 STXBP5LQ9Y2K9 1186 aa31.49■■■□□ 2.63
PVT1-219ENST00000523427 MYCNP04198 464 aaPredicted RBP31.48■■■□□ 2.63
PVT1-219ENST00000523427 GRB14Q14449 540 aa31.48■■■□□ 2.63
PVT1-219ENST00000523427 DPP9Q86TI2 863 aa31.48■■■□□ 2.63
PVT1-219ENST00000523427 RIOK1Q9BRS2 568 aaKnown RBP31.48■■■□□ 2.63
PVT1-219ENST00000523427 ANO1Q5XXA6 986 aa31.47■■■□□ 2.63
PVT1-219ENST00000523427 CEP85Q6P2H3 762 aa31.47■■■□□ 2.63
PVT1-219ENST00000523427 TRPV1Q8NER1 839 aa31.47■■■□□ 2.63
PVT1-219ENST00000523427 TANGO6Q9C0B7 1094 aa31.47■■■□□ 2.63
PVT1-219ENST00000523427 MCM9Q9NXL9 1143 aa31.47■■■□□ 2.63
PVT1-219ENST00000523427 CUL9Q8IWT3 2517 aa31.47■■■□□ 2.63
PVT1-219ENST00000523427 SAMD1Q6SPF0 538 aaPredicted RBP31.46■■■□□ 2.63
PVT1-219ENST00000523427 LPAR1Q92633 364 aa31.46■■■□□ 2.63
PVT1-219ENST00000523427 APBB1O00213 710 aa31.45■■■□□ 2.63
PVT1-219ENST00000523427 HOXC6P09630 235 aa31.45■■■□□ 2.63
PVT1-219ENST00000523427 GJC2Q5T442 439 aaPredicted RBP31.45■■■□□ 2.63
PVT1-219ENST00000523427 SLC9C2Q5TAH2 1124 aa31.45■■■□□ 2.63
PVT1-219ENST00000523427 LBX2Q6XYB7 198 aa31.45■■■□□ 2.63
PVT1-219ENST00000523427 MOV10L1Q9BXT6 1211 aaKnown RBP31.45■■■□□ 2.63
PVT1-219ENST00000523427 CRNKL1Q9BZJ0 848 aaKnown RBP31.45■■■□□ 2.63
PVT1-219ENST00000523427 A0A1W2PRG0 241 aa31.44■■■□□ 2.62
PVT1-219ENST00000523427 MSCO60682 206 aa31.44■■■□□ 2.62
PVT1-219ENST00000523427 COG2Q14746 738 aa31.44■■■□□ 2.62
PVT1-219ENST00000523427 ERC1Q8IUD2 1116 aa31.44■■■□□ 2.62
PVT1-219ENST00000523427 FAM161BQ96MY7 647 aa31.44■■■□□ 2.62
PVT1-219ENST00000523427 PRKAG2Q9UGJ0 569 aa31.44■■■□□ 2.62
PVT1-219ENST00000523427 CYP2D6P10635 497 aa31.43■■■□□ 2.62
PVT1-219ENST00000523427 ADORA2AP29274 412 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms