RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 NR2E3Q9Y5X4 410 aa15.33■□□□□ 0.04
TOP1MT-217ENST00000523417 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 FXR1P51114 621 aaKnown RBP eCLIP15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 ERVK-9P63128 1117 aa15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 ERVK-24P63145 666 aa15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 MORN1Q5T089 497 aa15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 SOCS4Q8WXH5 440 aa15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 PRO3102Q9H379 93 aa15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 HMX1Q9NP08 348 aaPredicted RBP15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 DCP1AQ9NPI6 582 aaPredicted RBP15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 ZNF532Q9HCE3 1301 aa15.32■□□□□ 0.04
TOP1MT-217ENST00000523417 FOCADQ5VW36 1801 aa15.31■□□□□ 0.04
TOP1MT-217ENST00000523417 GOLIM4O00461 696 aa15.31■□□□□ 0.04
TOP1MT-217ENST00000523417 POLR3DP05423 398 aaPredicted RBP15.31■□□□□ 0.04
TOP1MT-217ENST00000523417 HAUS7Q99871 368 aa15.31■□□□□ 0.04
TOP1MT-217ENST00000523417 DOCK3Q8IZD9 2030 aa15.31■□□□□ 0.04
TOP1MT-217ENST00000523417 CNMDO75829 334 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 ADD2P35612 726 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 RAB3GAP1Q15042 981 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 UBE3CQ15386 1083 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 GPR142Q7Z601 462 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 PLEKHH3Q7Z736 793 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 ACER1Q8TDN7 264 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 TRIB2Q92519 343 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 ATP8A2Q9NTI2 1148 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 PAG1Q9NWQ8 432 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 MCM9Q9NXL9 1143 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 SWAP70Q9UH65 585 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 OGDHLQ9ULD0 1010 aa15.3■□□□□ 0.04
TOP1MT-217ENST00000523417 MYO5AQ9Y4I1 1855 aaKnown RBP15.29■□□□□ 0.04
TOP1MT-217ENST00000523417 CYP2B6P20813 491 aa15.29■□□□□ 0.04
TOP1MT-217ENST00000523417 MNX1P50219 401 aaPredicted RBP15.29■□□□□ 0.04
TOP1MT-217ENST00000523417 CCNA1P78396 465 aa15.29■□□□□ 0.04
TOP1MT-217ENST00000523417 NECAB2Q7Z6G3 386 aa15.29■□□□□ 0.04
TOP1MT-217ENST00000523417 PORCNQ9H237 461 aa15.29■□□□□ 0.04
TOP1MT-217ENST00000523417 HOXC10Q9NYD6 342 aa15.29■□□□□ 0.04
TOP1MT-217ENST00000523417 CEP290O15078 2479 aa15.29■□□□□ 0.04
TOP1MT-217ENST00000523417 CDK5RAP2Q96SN8 1893 aa15.29■□□□□ 0.04
TOP1MT-217ENST00000523417 PEX10O60683 326 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 IGHA2P01877 340 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 VCAM1P19320 739 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 RGS2P41220 211 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 TRIM32Q13049 653 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 SEPT2Q15019 361 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 LCORLQ8N3X6 602 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 PAWRQ96IZ0 340 aaKnown RBP15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 DNAJC2Q99543 621 aaKnown RBP15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 FEZ1Q99689 392 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.28■□□□□ 0.041e-6■■□□□ 13.3
TOP1MT-217ENST00000523417 BOLA2Q9H3K6 86 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 ATAD5Q96QE3 1844 aa15.28■□□□□ 0.04
TOP1MT-217ENST00000523417 A0A1W2PPC1 479 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 A0A1W2PRG0 241 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 SLC15A5A6NIM6 579 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 APBB1O00213 710 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 EVI5O60447 810 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 GLRX3O76003 335 aaKnown RBP15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 HOXC6P09630 235 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 COG2Q14746 738 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 C12orf60Q5U649 245 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 TMEM179Q6ZVK1 233 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 SIAH1Q8IUQ4 282 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 CCAR1Q8IX12 1150 aaKnown RBP15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 EDC3Q96F86 508 aaKnown RBP15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 CCDC17Q96LX7 622 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 LRRCC1Q9C099 1032 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 NBPF3Q9H094 633 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 DCTPP1Q9H773 170 aa15.27■□□□□ 0.04
TOP1MT-217ENST00000523417 SPDYE16A6NNV3 312 aaPredicted RBP15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 PTPREP23469 700 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 CACNB2Q08289 660 aaPredicted RBP15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 MAP2K5Q13163 448 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 LHX8Q68G74 356 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 ZSCAN25Q6NSZ9 544 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 SDR42E1Q8WUS8 393 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 LPAR1Q92633 364 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 APBA2Q99767 749 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 PAGR1Q9BTK6 254 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 RPAP3Q9H6T3 665 aaPredicted RBP15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 ARMT1Q9H993 441 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 BTBD7Q9P203 1132 aa15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 RBM27Q9P2N5 1060 aaKnown RBP15.26■□□□□ 0.03
TOP1MT-217ENST00000523417 PRKAB2O43741 272 aa15.25■□□□□ 0.03
TOP1MT-217ENST00000523417 STRNO43815 780 aa15.25■□□□□ 0.03
TOP1MT-217ENST00000523417 ZKSCAN1P17029 563 aaPredicted RBP15.25■□□□□ 0.03
TOP1MT-217ENST00000523417 ZYXQ15942 572 aaKnown RBP15.25■□□□□ 0.03
TOP1MT-217ENST00000523417 C20orf194Q5TEA3 1177 aa15.25■□□□□ 0.03
TOP1MT-217ENST00000523417 TMX2Q9Y320 296 aa15.25■□□□□ 0.03
TOP1MT-217ENST00000523417 MYH1P12882 1939 aa15.25■□□□□ 0.03
TOP1MT-217ENST00000523417 MBD4O95243 580 aa15.24■□□□□ 0.03
TOP1MT-217ENST00000523417 BMP8BP34820 402 aa15.24■□□□□ 0.03
TOP1MT-217ENST00000523417 EVX2Q03828 476 aa15.24■□□□□ 0.03
TOP1MT-217ENST00000523417 GRB14Q14449 540 aa15.24■□□□□ 0.03
TOP1MT-217ENST00000523417 MB21D1Q8N884 522 aa15.24■□□□□ 0.03
TOP1MT-217ENST00000523417 SHCBP1Q8NEM2 672 aa15.24■□□□□ 0.03
TOP1MT-217ENST00000523417 DIS3LQ8TF46 1054 aaKnown RBP15.24■□□□□ 0.03
TOP1MT-217ENST00000523417 PLXNB2O15031 1838 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms