RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 BRF1Q92994 677 aa13.66□□□□□ -0.22
EXTL3-214ENST00000523271 YY1AP1Q9H869 796 aa13.66□□□□□ -0.22
EXTL3-214ENST00000523271 CCDC169A6NNP5 214 aa13.66□□□□□ -0.22
EXTL3-214ENST00000523271 LRRC8CQ8TDW0 803 aa13.66□□□□□ -0.22
EXTL3-214ENST00000523271 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
EXTL3-214ENST00000523271 USTQ9Y2C2 406 aa13.66□□□□□ -0.22
EXTL3-214ENST00000523271 ECE1P42892 770 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 RNF207Q6ZRF8 634 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 PRXQ9BXM0 1461 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 DNM1Q05193 864 aaKnown RBP13.65□□□□□ -0.22
EXTL3-214ENST00000523271 CYP7A1P22680 504 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 RRS1Q15050 365 aaKnown RBP13.65□□□□□ -0.22
EXTL3-214ENST00000523271 ZBBXA8MT70 800 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 THAP12O43422 761 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 IGSF3O75054 1194 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 BSPRYQ5W0U4 402 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 MIS12Q9H081 205 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 PEG3Q9GZU2 1588 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 NVLO15381 856 aaKnown RBP13.65□□□□□ -0.22
EXTL3-214ENST00000523271 OCA2Q04671 838 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 PRPSAP1Q14558 356 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 ANKRD42Q8N9B4 389 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 WWC3Q9ULE0 1092 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 IFNA8P32881 189 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 SNX1Q13596 522 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 EP400NLQ6ZTU2 488 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 RUNDC3BQ96NL0 473 aa13.65□□□□□ -0.22
EXTL3-214ENST00000523271 HARSP12081 509 aaKnown RBP13.65□□□□□ -0.23
EXTL3-214ENST00000523271 IQCB1Q15051 598 aa13.65□□□□□ -0.23
EXTL3-214ENST00000523271 DIABLOQ9NR28 239 aa13.65□□□□□ -0.23
EXTL3-214ENST00000523271 AMFRQ9UKV5 643 aa13.65□□□□□ -0.23
EXTL3-214ENST00000523271 PIK3R4Q99570 1358 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 M0QZ92 97 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 TBCCQ15814 346 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 TUBB6Q9BUF5 446 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 EIF3CLB5ME19 914 aaKnown RBP13.64□□□□□ -0.23
EXTL3-214ENST00000523271 TBC1D32Q96NH3 1257 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 EIF3CQ99613 913 aaKnown RBP13.64□□□□□ -0.23
EXTL3-214ENST00000523271 TTC1Q99614 292 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 ZSCAN32Q9NX65 697 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 SFMBT1Q9UHJ3 866 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 EIF3DO15371 548 aaKnown RBP eCLIP13.64□□□□□ -0.23
EXTL3-214ENST00000523271 TTI1O43156 1089 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 PRPF6O94906 941 aaKnown RBP13.64□□□□□ -0.23
EXTL3-214ENST00000523271 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
EXTL3-214ENST00000523271 MAP3K7O43318 606 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 SKIP12755 728 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 BRD3Q15059 726 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 MPRIPQ6WCQ1 1025 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 KIF14Q15058 1648 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 GPC4O75487 556 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 OCM2P0CE71 109 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 OCMP0CE72 109 aaPredicted RBP13.64□□□□□ -0.23
EXTL3-214ENST00000523271 FBXL13Q8NEE6 735 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 CAPS2Q9BXY5 557 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 ANGPTL2Q9UKU9 493 aa13.64□□□□□ -0.23
EXTL3-214ENST00000523271 MAGEB6P1A0A0J9YX57 407 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 GNA14O95837 355 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 RFC4P35249 363 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 KLHL7Q8IXQ5 586 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 BBOF1Q8ND07 529 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 SPZ1Q9BXG8 430 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 PACSIN2Q9UNF0 486 aaPredicted RBP13.63□□□□□ -0.23
EXTL3-214ENST00000523271 PTPN23Q9H3S7 1636 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 CCDC84Q86UT8 332 aaPredicted RBP13.63□□□□□ -0.23
EXTL3-214ENST00000523271 ZNF622Q969S3 477 aaKnown RBP eCLIP13.63□□□□□ -0.23
EXTL3-214ENST00000523271 SERPINI1Q99574 410 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 LAMC3Q9Y6N6 1575 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 RINT1Q6NUQ1 792 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 HYOU1Q9Y4L1 999 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 TMEM247A6NEH6 219 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 KRT4P19013 534 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
EXTL3-214ENST00000523271 DDX42Q86XP3 938 aaKnown RBP eCLIP13.63□□□□□ -0.23
EXTL3-214ENST00000523271 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 PIP4K2CQ8TBX8 421 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 NR1H4Q96RI1 486 aaPredicted RBP13.63□□□□□ -0.23
EXTL3-214ENST00000523271 GRIN1Q05586 938 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 ITM2BQ9Y287 266 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 FAM95CA0A1B0GW59 222 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 MCF2P10911 925 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 IL9RQ01113 521 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 SCYL3Q8IZE3 742 aa13.63□□□□□ -0.23
EXTL3-214ENST00000523271 POLR2BP30876 1174 aaKnown RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 SFMBT2Q5VUG0 894 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 ST13P4Q8IZP2 240 aaPredicted RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 NECAB1Q8N987 351 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 IFT122Q9HBG6 1241 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 VGLL3A8MV65 326 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 CCNT1O60563 726 aaKnown RBP13.62□□□□□ -0.23
EXTL3-214ENST00000523271 SRGAP2BP0DMP2 458 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 DNM2P50570 870 aa13.62□□□□□ -0.23
EXTL3-214ENST00000523271 RPS6KC1Q96S38 1066 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms