RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 UBXN2AP68543 259 aa19.51■□□□□ 0.71
CLN8-206ENST00000523237 SEPT2Q15019 361 aa19.51■□□□□ 0.71
CLN8-206ENST00000523237 ACER1Q8TDN7 264 aa19.51■□□□□ 0.71
CLN8-206ENST00000523237 USP17L12C9JPN9 530 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 USP17L21D6R901 530 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 MTFR1Q15390 333 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 LRRFIP1Q32MZ4 808 aaKnown RBP19.5■□□□□ 0.71
CLN8-206ENST00000523237 C12orf60Q5U649 245 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 TMEM179Q6ZVK1 233 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 SLC44A5Q8NCS7 719 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 GPRC5AQ8NFJ5 357 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 PXYLP1Q8TE99 480 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 APPBP2Q92624 585 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 DYNLL2Q96FJ2 89 aa19.5■□□□□ 0.71
CLN8-206ENST00000523237 USP17L15C9J2P7 530 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 USP17L13C9JLJ4 530 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 USP17L11C9JVI0 530 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 USP17L18D6R9N7 530 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 USP17L22D6RA61 530 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 USP17L17D6RBQ6 530 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 USP17L19D6RCP7 530 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 USP17L20D6RJB6 530 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 RNF113AO15541 343 aaKnown RBP19.49■□□□□ 0.71
CLN8-206ENST00000523237 GLRX3O76003 335 aaKnown RBP19.49■□□□□ 0.71
CLN8-206ENST00000523237 USP17L24Q0WX57 530 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 AAMPQ13685 434 aa19.49■□□□□ 0.71
CLN8-206ENST00000523237 STRBPQ96SI9 672 aaKnown RBP19.49■□□□□ 0.71
CLN8-206ENST00000523237 CYP2D7A0A087X1C5 515 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 VCAM1P19320 739 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 MX1P20591 662 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 HDAC1Q13547 482 aaPredicted RBP19.48■□□□□ 0.71
CLN8-206ENST00000523237 CTR9Q6PD62 1173 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 NKX2-3Q8TAU0 364 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 PI4K2BQ8TCG2 481 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 OSBP2Q969R2 916 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 GCC1Q96CN9 775 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 CCDC17Q96LX7 622 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 TXNRD2Q9NNW7 524 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 RBPJLQ9UBG7 517 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 ARPP21Q9UBL0 812 aaPredicted RBP19.48■□□□□ 0.71
CLN8-206ENST00000523237 PLXNB2O15031 1838 aa19.48■□□□□ 0.71
CLN8-206ENST00000523237 CCL5P13501 91 aa19.47■□□□□ 0.71
CLN8-206ENST00000523237 ELNP15502 786 aa19.47■□□□□ 0.71
CLN8-206ENST00000523237 CDK8P49336 464 aa19.47■□□□□ 0.71
CLN8-206ENST00000523237 ANKRD45Q5TZF3 282 aa19.47■□□□□ 0.71
CLN8-206ENST00000523237 PRPF38BQ5VTL8 546 aaKnown RBP19.47■□□□□ 0.71
CLN8-206ENST00000523237 GIMAP6Q6P9H5 292 aa19.47■□□□□ 0.71
CLN8-206ENST00000523237 CATSPERGQ6ZRH7 1159 aa19.47■□□□□ 0.71
CLN8-206ENST00000523237 C16orf86Q6ZW13 317 aa19.47■□□□□ 0.71
CLN8-206ENST00000523237 OTUD7AQ8TE49 926 aaPredicted RBP19.47■□□□□ 0.71
CLN8-206ENST00000523237 RNF208Q9H0X6 261 aa19.47■□□□□ 0.71
CLN8-206ENST00000523237 GJB1P08034 283 aa19.46■□□□□ 0.71
CLN8-206ENST00000523237 AKR1B1P15121 316 aa19.46■□□□□ 0.71
CLN8-206ENST00000523237 GNAT2P19087 354 aa19.46■□□□□ 0.71
CLN8-206ENST00000523237 ERVK-9P63128 1117 aa19.46■□□□□ 0.71
CLN8-206ENST00000523237 ERVK-24P63145 666 aa19.46■□□□□ 0.71
CLN8-206ENST00000523237 CCAR1Q8IX12 1150 aaKnown RBP19.46■□□□□ 0.71
CLN8-206ENST00000523237 PAGR1Q9BTK6 254 aa19.46■□□□□ 0.71
CLN8-206ENST00000523237 RPAP3Q9H6T3 665 aaPredicted RBP19.46■□□□□ 0.71
CLN8-206ENST00000523237 ARHGEF10LQ9HCE6 1279 aa19.46■□□□□ 0.71
CLN8-206ENST00000523237 BRCA2P51587 3418 aa19.46■□□□□ 0.71
CLN8-206ENST00000523237 A0A1W2PRG0 241 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 GSG1L2A8MUP6 293 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 SMIM22K7EJ46 135 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 GPAA1O43292 621 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 PEX10O60683 326 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 INHAP05111 366 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 MAPK4P31152 587 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 SBK1Q52WX2 424 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 FSD1Q9BTV5 496 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 SH2D4AQ9H788 454 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 GJD2Q9UKL4 321 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 RABGAP1Q9Y3P9 1069 aa19.45■□□□□ 0.7
CLN8-206ENST00000523237 GJA8P48165 433 aa19.44■□□□□ 0.7
CLN8-206ENST00000523237 ICA1Q05084 483 aa19.44■□□□□ 0.7
CLN8-206ENST00000523237 Q3C1V9 767 aa19.44■□□□□ 0.7
CLN8-206ENST00000523237 SOCS4Q8WXH5 440 aa19.44■□□□□ 0.7
CLN8-206ENST00000523237 UNC93B1Q9H1C4 597 aa19.44■□□□□ 0.7
CLN8-206ENST00000523237 SALL3Q9BXA9 1300 aa19.44■□□□□ 0.7
CLN8-206ENST00000523237 CCNA1P78396 465 aa19.43■□□□□ 0.7
CLN8-206ENST00000523237 POTEEQ6S8J3 1075 aa19.43■□□□□ 0.7
CLN8-206ENST00000523237 LBX2Q6XYB7 198 aa19.43■□□□□ 0.7
CLN8-206ENST00000523237 LPAR1Q92633 364 aa19.43■□□□□ 0.7
CLN8-206ENST00000523237 NUDT12Q9BQG2 462 aa19.43■□□□□ 0.7
CLN8-206ENST00000523237 M0R2C6 588 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 HMGCRP04035 888 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 APPP05067 770 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 TDO2P48775 406 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 CLEC10AQ8IUN9 316 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 SHISA4Q96DD7 197 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 TANGO6Q9C0B7 1094 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 PORCNQ9H237 461 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 KANSL2Q9H9L4 492 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 CWC22Q9HCG8 908 aaKnown RBP19.42■□□□□ 0.7
CLN8-206ENST00000523237 TMX2Q9Y320 296 aa19.42■□□□□ 0.7
CLN8-206ENST00000523237 MKI67P46013 3256 aaKnown RBP19.42■□□□□ 0.7
CLN8-206ENST00000523237 GREB1LQ9C091 1923 aaPredicted RBP19.41■□□□□ 0.7
CLN8-206ENST00000523237 SPDYE16A6NNV3 312 aaPredicted RBP19.41■□□□□ 0.7
CLN8-206ENST00000523237 MINDY4BA8MYZ0 360 aa19.41■□□□□ 0.7
CLN8-206ENST00000523237 PATL2C9JE40 543 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms