RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TATDN1Q6P1N9 297 aa18.74■□□□□ 0.59
MRPS28-209ENST00000522987 GPR142Q7Z601 462 aa18.74■□□□□ 0.59
MRPS28-209ENST00000522987 TTC6Q86TZ1 520 aa18.74■□□□□ 0.59
MRPS28-209ENST00000522987 SDR42E1Q8WUS8 393 aa18.74■□□□□ 0.59
MRPS28-209ENST00000522987 RIOK1Q9BRS2 568 aaKnown RBP18.74■□□□□ 0.59
MRPS28-209ENST00000522987 GINM1Q9NU53 330 aa18.74■□□□□ 0.59
MRPS28-209ENST00000522987 MPHOSPH10O00566 681 aaKnown RBP18.73■□□□□ 0.59
MRPS28-209ENST00000522987 CNMDO75829 334 aa18.73■□□□□ 0.59
MRPS28-209ENST00000522987 ZKSCAN1P17029 563 aaPredicted RBP18.73■□□□□ 0.59
MRPS28-209ENST00000522987 CCND3P30281 292 aaPredicted RBP18.73■□□□□ 0.59
MRPS28-209ENST00000522987 SEPT2Q15019 361 aa18.73■□□□□ 0.59
MRPS28-209ENST00000522987 PLEKHH3Q7Z736 793 aa18.73■□□□□ 0.59
MRPS28-209ENST00000522987 PRO3102Q9H379 93 aa18.73■□□□□ 0.59
MRPS28-209ENST00000522987 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
MRPS28-209ENST00000522987 ZNF532Q9HCE3 1301 aa18.73■□□□□ 0.59
MRPS28-209ENST00000522987 ZNFX1Q9P2E3 1918 aaKnown RBP18.72■□□□□ 0.59
MRPS28-209ENST00000522987 COL11A1P12107 1806 aaPredicted RBP18.72■□□□□ 0.59
MRPS28-209ENST00000522987 USP17L15C9J2P7 530 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 USP17L13C9JLJ4 530 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 USP17L11C9JVI0 530 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 USP17L18D6R9N7 530 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 USP17L22D6RA61 530 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 USP17L17D6RBQ6 530 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 USP17L19D6RCP7 530 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 USP17L20D6RJB6 530 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 VCAM1P19320 739 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 MAPK4P31152 587 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 MNX1P50219 401 aaPredicted RBP18.72■□□□□ 0.59
MRPS28-209ENST00000522987 CACNB2Q08289 660 aaPredicted RBP18.72■□□□□ 0.59
MRPS28-209ENST00000522987 USP17L24Q0WX57 530 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 LCORLQ8N3X6 602 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 SLC44A5Q8NCS7 719 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 SOCS4Q8WXH5 440 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 NBPF3Q9H094 633 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 EHD4Q9H223 541 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 CABP5Q9NP86 173 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 MCM9Q9NXL9 1143 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 RLFQ13129 1914 aa18.72■□□□□ 0.59
MRPS28-209ENST00000522987 SOX1O00570 391 aaPredicted RBP18.71■□□□□ 0.59
MRPS28-209ENST00000522987 CHGBP05060 677 aa18.71■□□□□ 0.59
MRPS28-209ENST00000522987 IFIT2P09913 472 aaKnown RBP18.71■□□□□ 0.59
MRPS28-209ENST00000522987 GUCY1A2P33402 732 aa18.71■□□□□ 0.59
MRPS28-209ENST00000522987 CLEC10AQ8IUN9 316 aa18.71■□□□□ 0.59
MRPS28-209ENST00000522987 SIRT2Q8IXJ6 389 aa18.71■□□□□ 0.59
MRPS28-209ENST00000522987 CLASRPQ8N2M8 674 aaKnown RBP18.71■□□□□ 0.59
MRPS28-209ENST00000522987 CRNKL1Q9BZJ0 848 aaKnown RBP18.71■□□□□ 0.59
MRPS28-209ENST00000522987 C11orf49Q9H6J7 331 aa18.71■□□□□ 0.59
MRPS28-209ENST00000522987 RPAP3Q9H6T3 665 aaPredicted RBP18.71■□□□□ 0.59
MRPS28-209ENST00000522987 ARMT1Q9H993 441 aa18.71■□□□□ 0.59
MRPS28-209ENST00000522987 BTBD7Q9P203 1132 aa18.71■□□□□ 0.59
MRPS28-209ENST00000522987 PARP14Q460N5 1801 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 RGS2P41220 211 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 TTF1Q15361 905 aaPredicted RBP18.7■□□□□ 0.58
MRPS28-209ENST00000522987 HSP90AB4PQ58FF6 505 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 MORN1Q5T089 497 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 MAP3K21Q5TCX8 1036 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 SAMD1Q6SPF0 538 aaPredicted RBP18.7■□□□□ 0.58
MRPS28-209ENST00000522987 CATSPERGQ6ZRH7 1159 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 USP6NLQ92738 828 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 DYNLL2Q96FJ2 89 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 LRCH3Q96II8 777 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 C12orf42Q96LP6 360 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 BOLA2Q9H3K6 86 aa18.7■□□□□ 0.58
MRPS28-209ENST00000522987 RANBP2P49792 3224 aaKnown RBP18.69■□□□□ 0.58
MRPS28-209ENST00000522987 SZT2Q5T011 3432 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 SMIM22K7EJ46 135 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 PRKAB2O43741 272 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 IGSF3O75054 1194 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 CERS3Q8IU89 383 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 ANKLE1Q8NAG6 615 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 KIF1BPQ96EK5 621 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 APBA2Q99767 749 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 KIAA1683Q9H0B3 1180 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 FLRT1Q9NZU1 646 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 OGDHLQ9ULD0 1010 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 RABGAP1Q9Y3P9 1069 aa18.69■□□□□ 0.58
MRPS28-209ENST00000522987 CYP2D7A0A087X1C5 515 aa18.68■□□□□ 0.58
MRPS28-209ENST00000522987 A0A1W2PRG0 241 aa18.68■□□□□ 0.58
MRPS28-209ENST00000522987 TCRBV5S4A2TA0A5A2 114 aa18.68■□□□□ 0.58
MRPS28-209ENST00000522987 XRCC5P13010 732 aaKnown RBP18.68■□□□□ 0.58
MRPS28-209ENST00000522987 USP14P54578 494 aa18.68■□□□□ 0.58
MRPS28-209ENST00000522987 MAP2K5Q13163 448 aa18.68■□□□□ 0.58
MRPS28-209ENST00000522987 GTF3C2Q8WUA4 911 aaPredicted RBP18.68■□□□□ 0.58
MRPS28-209ENST00000522987 PFASO15067 1338 aa18.68■□□□□ 0.58
MRPS28-209ENST00000522987 SPDYE16A6NNV3 312 aaPredicted RBP18.67■□□□□ 0.58
MRPS28-209ENST00000522987 MBD4O95243 580 aa18.67■□□□□ 0.58
MRPS28-209ENST00000522987 GABPAQ06546 454 aa18.67■□□□□ 0.58
MRPS28-209ENST00000522987 TANGO6Q9C0B7 1094 aa18.67■□□□□ 0.58
MRPS28-209ENST00000522987 DCP1AQ9NPI6 582 aaPredicted RBP18.67■□□□□ 0.58
MRPS28-209ENST00000522987 A0A0G2JMZ2 1700 aa18.66■□□□□ 0.58
MRPS28-209ENST00000522987 HMMRO75330 724 aa18.66■□□□□ 0.58
MRPS28-209ENST00000522987 CNGA1P29973 690 aa18.66■□□□□ 0.58
MRPS28-209ENST00000522987 CCNA1P78396 465 aa18.66■□□□□ 0.58
MRPS28-209ENST00000522987 KIAA1755Q5JYT7 1200 aa18.66■□□□□ 0.58
MRPS28-209ENST00000522987 NPLOC4Q8TAT6 608 aa18.66■□□□□ 0.58
MRPS28-209ENST00000522987 ZBTB40Q9NUA8 1239 aa18.66■□□□□ 0.58
MRPS28-209ENST00000522987 PAG1Q9NWQ8 432 aa18.66■□□□□ 0.58
MRPS28-209ENST00000522987 DDX19BQ9UMR2 479 aa18.66■□□□□ 0.58
MRPS28-209ENST00000522987 PLXNA1Q9UIW2 1896 aa18.65■□□□□ 0.58
MRPS28-209ENST00000522987 SMARCA5O60264 1052 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms