RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 EHD4Q9H223 541 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 TXNRD2Q9NNW7 524 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 RBPJLQ9UBG7 517 aa12.37□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L15C9J2P7 530 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L13C9JLJ4 530 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L11C9JVI0 530 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L18D6R9N7 530 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L22D6RA61 530 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L17D6RBQ6 530 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L19D6RCP7 530 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L20D6RJB6 530 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 SGPL1O95470 568 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L24Q0WX57 530 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 SEPT2Q15019 361 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 Q3C1V9 767 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 WDR78Q5VTH9 848 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 GCC1Q96CN9 775 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 DYNLL2Q96FJ2 89 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 HAUS7Q99871 368 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 GJD2Q9UKL4 321 aa12.36□□□□□ -0.43
CTNNA1-235ENST00000522730 MAST2Q6P0Q8 1798 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 CYP2D7A0A087X1C5 515 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 FARP2O94887 1054 aaPredicted RBP12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 ADD2P35612 726 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 USP14P54578 494 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 TRIM32Q13049 653 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 STK11IPQ8N1F8 1099 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 DCP1AQ9NPI6 582 aaPredicted RBP12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 MORF4L1Q9UBU8 362 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 PTPRFP10586 1907 aa12.35□□□□□ -0.43
CTNNA1-235ENST00000522730 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 GUCY1A2P33402 732 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 ERVK-9P63128 1117 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 ERVK-24P63145 666 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 ATP2B2Q01814 1243 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 HABP4Q5JVS0 413 aaKnown RBP12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 AMOTL1Q8IY63 956 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 DDRGK1Q96HY6 314 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 KIAA1683Q9H0B3 1180 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 PORCNQ9H237 461 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 RPAP3Q9H6T3 665 aaPredicted RBP12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 MYH1P12882 1939 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 SIPA1L1O43166 1804 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 MGAMO43451 1857 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 CDK5RAP2Q96SN8 1893 aa12.34□□□□□ -0.43
CTNNA1-235ENST00000522730 DOCK3Q8IZD9 2030 aa12.33□□□□□ -0.43
CTNNA1-235ENST00000522730 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 USP17L21D6R901 530 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 SMIM22K7EJ46 135 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 RAD21O60216 631 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 HMGCRP04035 888 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 VCAM1P19320 739 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 MAPK4P31152 587 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 ZSCAN25Q6NSZ9 544 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 PLEKHH3Q7Z736 793 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 HTATIP2Q9BUP3 242 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 TANGO6Q9C0B7 1094 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 HMX1Q9NP08 348 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
CTNNA1-235ENST00000522730 A0A1W2PRG0 241 aa12.32□□□□□ -0.44
CTNNA1-235ENST00000522730 GABPAQ06546 454 aa12.32□□□□□ -0.44
CTNNA1-235ENST00000522730 GPR142Q7Z601 462 aa12.32□□□□□ -0.44
CTNNA1-235ENST00000522730 CLEC10AQ8IUN9 316 aa12.32□□□□□ -0.44
CTNNA1-235ENST00000522730 GPATCH3Q96I76 525 aa12.32□□□□□ -0.44
CTNNA1-235ENST00000522730 PAWRQ96IZ0 340 aaKnown RBP12.32□□□□□ -0.44
CTNNA1-235ENST00000522730 PUS7LQ9H0K6 701 aaKnown RBP12.32□□□□□ -0.44
CTNNA1-235ENST00000522730 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
CTNNA1-235ENST00000522730 RABGAP1Q9Y3P9 1069 aa12.32□□□□□ -0.44
CTNNA1-235ENST00000522730 RBBP6Q7Z6E9 1792 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 EVI5O60447 810 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 CNMDO75829 334 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 GLRX3O76003 335 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 AKR1B1P15121 316 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 ZKSCAN1P17029 563 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 CDK8P49336 464 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 CCNA1P78396 465 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 UBE3CQ15386 1083 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 CCL14Q16627 93 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 C12orf60Q5U649 245 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 TMEM179Q6ZVK1 233 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 SPICE1Q8N0Z3 855 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 GTF3C2Q8WUA4 911 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 TRIB2Q92519 343 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 C12orf42Q96LP6 360 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 PAK6Q9NQU5 681 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 BTBD7Q9P203 1132 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 RPTORQ8N122 1335 aa12.31□□□□□ -0.44
CTNNA1-235ENST00000522730 LOC285556D6RIA3 1793 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms