RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GJB1P08034 283 aa24.96■■□□□ 1.59
SDCBP-209ENST00000522243 GPRC5AQ8NFJ5 357 aa24.96■■□□□ 1.59
SDCBP-209ENST00000522243 C12orf42Q96LP6 360 aa24.96■■□□□ 1.59
SDCBP-209ENST00000522243 PUS7LQ9H0K6 701 aaKnown RBP24.96■■□□□ 1.59
SDCBP-209ENST00000522243 ATP8A2Q9NTI2 1148 aa24.96■■□□□ 1.59
SDCBP-209ENST00000522243 PLXNB2O15031 1838 aa24.96■■□□□ 1.59
SDCBP-209ENST00000522243 GJA8P48165 433 aa24.95■■□□□ 1.58
SDCBP-209ENST00000522243 RRP1P56182 461 aaKnown RBP24.95■■□□□ 1.58
SDCBP-209ENST00000522243 Q3C1V9 767 aa24.95■■□□□ 1.58
SDCBP-209ENST00000522243 ZSCAN25Q6NSZ9 544 aa24.95■■□□□ 1.58
SDCBP-209ENST00000522243 NKX2-3Q8TAU0 364 aa24.95■■□□□ 1.58
SDCBP-209ENST00000522243 YTHDC1Q96MU7 727 aaKnown RBP24.95■■□□□ 1.58
SDCBP-209ENST00000522243 KIAA1683Q9H0B3 1180 aa24.95■■□□□ 1.58
SDCBP-209ENST00000522243 GJD2Q9UKL4 321 aa24.95■■□□□ 1.58
SDCBP-209ENST00000522243 SLC4A4Q9Y6R1 1079 aa24.95■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L15C9J2P7 530 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L13C9JLJ4 530 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L11C9JVI0 530 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L18D6R9N7 530 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L22D6RA61 530 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L17D6RBQ6 530 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L19D6RCP7 530 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L20D6RJB6 530 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 USP14P54578 494 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L24Q0WX57 530 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 POTEEQ6S8J3 1075 aa24.94■■□□□ 1.58
SDCBP-209ENST00000522243 VCAM1P19320 739 aa24.93■■□□□ 1.58
SDCBP-209ENST00000522243 ERVK-9P63128 1117 aa24.93■■□□□ 1.58
SDCBP-209ENST00000522243 ERVK-24P63145 666 aa24.93■■□□□ 1.58
SDCBP-209ENST00000522243 U2AF1L4Q8WU68 220 aaKnown RBP24.93■■□□□ 1.58
SDCBP-209ENST00000522243 GPATCH3Q96I76 525 aa24.93■■□□□ 1.58
SDCBP-209ENST00000522243 SWAP70Q9UH65 585 aa24.93■■□□□ 1.58
SDCBP-209ENST00000522243 A0A1W2PRG0 241 aa24.92■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L12C9JPN9 530 aa24.92■■□□□ 1.58
SDCBP-209ENST00000522243 USP17L21D6R901 530 aa24.92■■□□□ 1.58
SDCBP-209ENST00000522243 CYP2B6P20813 491 aa24.92■■□□□ 1.58
SDCBP-209ENST00000522243 C12orf60Q5U649 245 aa24.92■■□□□ 1.58
SDCBP-209ENST00000522243 CATSPERGQ6ZRH7 1159 aa24.92■■□□□ 1.58
SDCBP-209ENST00000522243 PORCNQ9H237 461 aa24.92■■□□□ 1.58
SDCBP-209ENST00000522243 AKR1B1P15121 316 aa24.91■■□□□ 1.58
SDCBP-209ENST00000522243 CLEC10AQ8IUN9 316 aa24.91■■□□□ 1.58
SDCBP-209ENST00000522243 CCAR1Q8IX12 1150 aaKnown RBP24.91■■□□□ 1.58
SDCBP-209ENST00000522243 KBTBD3Q8NAB2 608 aa24.91■■□□□ 1.58
SDCBP-209ENST00000522243 GTF3C2Q8WUA4 911 aaPredicted RBP24.91■■□□□ 1.58
SDCBP-209ENST00000522243 DDRGK1Q96HY6 314 aa24.91■■□□□ 1.58
SDCBP-209ENST00000522243 DEFB118Q96PH6 123 aa24.91■■□□□ 1.58
SDCBP-209ENST00000522243 CRBNQ96SW2 442 aa24.91■■□□□ 1.58
SDCBP-209ENST00000522243 RPAP3Q9H6T3 665 aaPredicted RBP24.91■■□□□ 1.58
SDCBP-209ENST00000522243 SGPL1O95470 568 aa24.9■■□□□ 1.58
SDCBP-209ENST00000522243 CDK8P49336 464 aa24.9■■□□□ 1.58
SDCBP-209ENST00000522243 TRIM32Q13049 653 aa24.9■■□□□ 1.58
SDCBP-209ENST00000522243 AMOTL1Q8IY63 956 aa24.9■■□□□ 1.58
SDCBP-209ENST00000522243 CNMDO75829 334 aa24.89■■□□□ 1.58
SDCBP-209ENST00000522243 MAPK4P31152 587 aa24.89■■□□□ 1.58
SDCBP-209ENST00000522243 TMEM179Q6ZVK1 233 aa24.89■■□□□ 1.58
SDCBP-209ENST00000522243 OTUD7AQ8TE49 926 aaPredicted RBP24.89■■□□□ 1.58
SDCBP-209ENST00000522243 NUDT12Q9BQG2 462 aa24.89■■□□□ 1.58
SDCBP-209ENST00000522243 BRCA2P51587 3418 aa24.89■■□□□ 1.57
SDCBP-209ENST00000522243 SLC34A2O95436 690 aa24.88■■□□□ 1.57
SDCBP-209ENST00000522243 HMGCRP04035 888 aa24.88■■□□□ 1.57
SDCBP-209ENST00000522243 CTR9Q6PD62 1173 aa24.88■■□□□ 1.57
SDCBP-209ENST00000522243 OSBP2Q969R2 916 aa24.88■■□□□ 1.57
SDCBP-209ENST00000522243 STRBPQ96SI9 672 aaKnown RBP24.88■■□□□ 1.57
SDCBP-209ENST00000522243 RABGAP1Q9Y3P9 1069 aa24.88■■□□□ 1.57
SDCBP-209ENST00000522243 TFRCP02786 760 aaKnown RBP24.87■■□□□ 1.57
SDCBP-209ENST00000522243 GPR142Q7Z601 462 aa24.87■■□□□ 1.57
SDCBP-209ENST00000522243 TRIB2Q92519 343 aa24.87■■□□□ 1.57
SDCBP-209ENST00000522243 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.87■■□□□ 1.578e-21■■■■■ 43.8
SDCBP-209ENST00000522243 CWC22Q9HCG8 908 aaKnown RBP24.87■■□□□ 1.57
SDCBP-209ENST00000522243 PAK6Q9NQU5 681 aaPredicted RBP24.87■■□□□ 1.57
SDCBP-209ENST00000522243 RNF113AO15541 343 aaKnown RBP24.86■■□□□ 1.57
SDCBP-209ENST00000522243 FARP2O94887 1054 aaPredicted RBP24.86■■□□□ 1.57
SDCBP-209ENST00000522243 KIAA1755Q5JYT7 1200 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 WDR78Q5VTH9 848 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 C16orf86Q6ZW13 317 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 PLEKHH3Q7Z736 793 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 SIAH1Q8IUQ4 282 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 STK11IPQ8N1F8 1099 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 SOCS4Q8WXH5 440 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 APPBP2Q92624 585 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 DPF3Q92784 378 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 BTBD7Q9P203 1132 aa24.86■■□□□ 1.57
SDCBP-209ENST00000522243 SPDYE16A6NNV3 312 aaPredicted RBP24.85■■□□□ 1.57
SDCBP-209ENST00000522243 ICA1Q05084 483 aa24.85■■□□□ 1.57
SDCBP-209ENST00000522243 UBE2Q1Q7Z7E8 422 aa24.85■■□□□ 1.57
SDCBP-209ENST00000522243 CCDC17Q96LX7 622 aa24.85■■□□□ 1.57
SDCBP-209ENST00000522243 ARHGEF10LQ9HCE6 1279 aa24.85■■□□□ 1.57
SDCBP-209ENST00000522243 TTC41PQ6P2S7 1318 aa24.85■■□□□ 1.57
SDCBP-209ENST00000522243 GSG1L2A8MUP6 293 aa24.84■■□□□ 1.57
SDCBP-209ENST00000522243 MORN1Q5T089 497 aa24.84■■□□□ 1.57
SDCBP-209ENST00000522243 PI4K2BQ8TCG2 481 aa24.84■■□□□ 1.57
SDCBP-209ENST00000522243 TANGO6Q9C0B7 1094 aa24.84■■□□□ 1.57
SDCBP-209ENST00000522243 HMX1Q9NP08 348 aaPredicted RBP24.84■■□□□ 1.57
SDCBP-209ENST00000522243 ARPP21Q9UBL0 812 aaPredicted RBP24.84■■□□□ 1.57
SDCBP-209ENST00000522243 MKI67P46013 3256 aaKnown RBP24.83■■□□□ 1.57
SDCBP-209ENST00000522243 M0R2C6 588 aa24.83■■□□□ 1.57
SDCBP-209ENST00000522243 CCNA1P78396 465 aa24.83■■□□□ 1.57
SDCBP-209ENST00000522243 ATP2B2Q01814 1243 aa24.83■■□□□ 1.57
SDCBP-209ENST00000522243 LBX2Q6XYB7 198 aa24.83■■□□□ 1.57
SDCBP-209ENST00000522243 SPICE1Q8N0Z3 855 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms