RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 USP17L12C9JPN9 530 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 USP17L21D6R901 530 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 HMGCS2P54868 508 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 MFAP1P55081 439 aaKnown RBP8.1□□□□□ -1.11
SPIDR-218ENST00000522222 DGKZQ13574 1117 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 MTMR2Q13614 643 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 SKOR2Q2VWA4 1001 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-218ENST00000522222 TREML2Q5T2D2 321 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 TATDN1Q6P1N9 297 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 CASC1Q6TDU7 716 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 CCDC129Q6ZRS4 1044 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 FASTKD5Q7L8L6 764 aaKnown RBP8.1□□□□□ -1.11
SPIDR-218ENST00000522222 AMOTL1Q8IY63 956 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 CD99L2Q8TCZ2 262 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 GBP4Q96PP9 640 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 PARK7Q99497 189 aaKnown RBP8.1□□□□□ -1.11
SPIDR-218ENST00000522222 WDR18Q9BV38 432 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 AS3MTQ9HBK9 375 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 ZFYVE28Q9HCC9 887 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 GINM1Q9NU53 330 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 ARPP21Q9UBL0 812 aaPredicted RBP8.1□□□□□ -1.11
SPIDR-218ENST00000522222 AGTPBP1Q9UPW5 1226 aa8.1□□□□□ -1.11
SPIDR-218ENST00000522222 A0A0D9SFI3 127 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 TLR2O60603 784 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 CDC45O75419 566 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 GNAT2P19087 354 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 GUCY1A2P33402 732 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 TDO2P48775 406 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 VASPP50552 380 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-218ENST00000522222 CAP1Q01518 475 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 ABCB5Q2M3G0 1257 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 CERKLQ49MI3 558 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-218ENST00000522222 C12orf60Q5U649 245 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 CTR9Q6PD62 1173 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 C16orf86Q6ZW13 317 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 CLEC10AQ8IUN9 316 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-218ENST00000522222 ERO1AQ96HE7 468 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 ABHD8Q96I13 439 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 FAM227BQ96M60 508 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 FEZ1Q99689 392 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 SLKQ9H2G2 1235 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-218ENST00000522222 OSBPL3Q9H4L5 887 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 SWAP70Q9UH65 585 aa8.09□□□□□ -1.11
SPIDR-218ENST00000522222 GREB1LQ9C091 1923 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-218ENST00000522222 TRIM6-TRIM34B2RNG4 842 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 GOLGA6L22H0YM25 854 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 MPHOSPH10O00566 681 aaKnown RBP8.08□□□□□ -1.12
SPIDR-218ENST00000522222 FOXP2O15409 715 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 CYP2C8P10632 490 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 AKR1B1P15121 316 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 MCM4P33991 863 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 CDK8P49336 464 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 BACE1P56817 501 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 SP3Q02447 781 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 NMIQ13287 307 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-218ENST00000522222 SEPT2Q15019 361 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 RAB3GAP1Q15042 981 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 ZYXQ15942 572 aaKnown RBP8.08□□□□□ -1.12
SPIDR-218ENST00000522222 SBK1Q52WX2 424 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 SH3D19Q5HYK7 790 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 IFFO2Q5TF58 517 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 GIMAP6Q6P9H5 292 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 OTOP1Q7RTM1 612 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 ACER1Q8TDN7 264 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 RILPL2Q969X0 211 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 CPA4Q9UI42 421 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 TAOK2Q9UL54 1235 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 SLC45A1Q9Y2W3 748 aa8.08□□□□□ -1.12
SPIDR-218ENST00000522222 HTTP42858 3142 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 GOLGA6L3A6NEY3 463 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 MINDY4BA8MYZ0 360 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 USP17L10C9JJH3 530 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 APPP05067 770 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 BCRP11274 1271 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 GSPT1P15170 499 aaKnown RBP8.07□□□□□ -1.12
SPIDR-218ENST00000522222 LACTBP83111 547 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-218ENST00000522222 ICA1Q05084 483 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 TTC22Q5TAA0 569 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 VPS53Q5VIR6 699 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 C17orf99Q6UX52 265 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 TMEM179Q6ZVK1 233 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 ZNF589Q86UQ0 364 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-218ENST00000522222 STK11IPQ8N1F8 1099 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 SMCR8Q8TEV9 937 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-218ENST00000522222 C12orf42Q96LP6 360 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 ARHGAP39Q9C0H5 1083 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 NAPBQ9H115 298 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 CABP5Q9NP86 173 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 HELLSQ9NRZ9 838 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 TMOD4Q9NZQ9 345 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 PNMA3Q9UL41 463 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 TRIM17Q9Y577 477 aa8.07□□□□□ -1.12
SPIDR-218ENST00000522222 CCDC171Q6TFL3 1326 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 LAMA4Q16363 1823 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 C19orf81C9J6K1 198 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 PATL2C9JE40 543 aaKnown RBP8.06□□□□□ -1.12
SPIDR-218ENST00000522222 ECM2O94769 699 aaPredicted RBP8.06□□□□□ -1.12
SPIDR-218ENST00000522222 VCAM1P19320 739 aa8.06□□□□□ -1.12
SPIDR-218ENST00000522222 SDSP20132 328 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms