RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 RBM6P78332 1123 aaKnown RBP18.08■□□□□ 0.49
USP42-207ENST00000521713 KRBA2Q6ZNG9 492 aa18.08■□□□□ 0.49
USP42-207ENST00000521713 FNBP1Q96RU3 617 aa18.08■□□□□ 0.49
USP42-207ENST00000521713 TRAF5O00463 557 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 NLRX1Q86UT6 975 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 SDR42E1Q8WUS8 393 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 CCDC42Q96M95 316 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 PRAMEF22A3QJZ6 481 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 EPB41P11171 864 aaKnown RBP18.08■□□□□ 0.48
USP42-207ENST00000521713 ADRA2BP18089 450 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 ICA1Q05084 483 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 KIAA0753Q2KHM9 967 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 CCDC50Q8IVM0 306 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 SNX29Q8TEQ0 813 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 LRRC45Q96CN5 670 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 CCDC114Q96M63 670 aa18.08■□□□□ 0.48
USP42-207ENST00000521713 DBNLQ9UJU6 430 aaKnown RBP18.08■□□□□ 0.48
USP42-207ENST00000521713 PDE4DQ08499 809 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 NCAPH2Q6IBW4 605 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 CEP57Q86XR8 500 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 PNMA1Q8ND90 353 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.07■□□□□ 0.48
USP42-207ENST00000521713 DNM3Q9UQ16 869 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 CCDC169A6NNP5 214 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 SYT10Q6XYQ8 523 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 ALKQ9UM73 1620 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 MYL5Q02045 173 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 CALCRLQ16602 461 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 GNPTABQ3T906 1256 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 RBSNQ9H1K0 784 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 RASAL2Q9UJF2 1139 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 MRPL11Q9Y3B7 192 aaKnown RBP18.07■□□□□ 0.48
USP42-207ENST00000521713 FGAP02671 866 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 UBXN1Q04323 297 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 HOMER2Q9NSB8 354 aa18.07■□□□□ 0.48
USP42-207ENST00000521713 KCNQ4P56696 695 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 GRAPQ13588 217 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 GRAPLQ8TC17 118 aaPredicted RBP18.06■□□□□ 0.48
USP42-207ENST00000521713 ZFP91Q96JP5 570 aaPredicted RBP18.06■□□□□ 0.48
USP42-207ENST00000521713 SEC31BQ9NQW1 1179 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 VAV2P52735 878 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 STRN3Q13033 797 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 SWAP70Q9UH65 585 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 TNKSO95271 1327 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 SMCO2A6NFE2 343 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 RIOK3O14730 519 aaKnown RBP18.06■□□□□ 0.48
USP42-207ENST00000521713 ZNF500O60304 480 aaPredicted RBP18.06■□□□□ 0.48
USP42-207ENST00000521713 MKRN1Q9UHC7 482 aaKnown RBP18.06■□□□□ 0.48
USP42-207ENST00000521713 CDAN1Q8IWY9 1227 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 FANCBQ8NB91 859 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 CCDC77Q9BR77 488 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 OVOS2A0A0G2JMS6 1433 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 OVOS2A0A0J9YW53 1432 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 OVOS2Q6IE36 1432 aa18.06■□□□□ 0.48
USP42-207ENST00000521713 MMP10P09238 476 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 DNM2P50570 870 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 RTKN2Q8IZC4 609 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 SPC25Q9HBM1 224 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 CPSF2Q9P2I0 782 aaKnown RBP18.05■□□□□ 0.48
USP42-207ENST00000521713 JCADQ9P266 1359 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 ADORA1P30542 326 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 EVCP57679 992 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 KIF5AQ12840 1032 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 LUC7L2Q9Y383 392 aaKnown RBP18.05■□□□□ 0.48
USP42-207ENST00000521713 WDR44Q5JSH3 913 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 OTUD7BQ6GQQ9 843 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 CETN3O15182 167 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 DDAH1O94760 285 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 ABCB5Q2M3G0 1257 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 SUPT20HL1Q3ZLR7 823 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 GALNT17Q6IS24 598 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 GTF3C6Q969F1 213 aa18.05■□□□□ 0.48
USP42-207ENST00000521713 MCF2L2Q86YR7 1114 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 AFAP1L1Q8TED9 768 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 NARFQ9UHQ1 456 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 UNC13BO14795 1591 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 BIRC3Q13489 604 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 DALRD3Q5D0E6 543 aaKnown RBP18.04■□□□□ 0.48
USP42-207ENST00000521713 DNAJC21Q5F1R6 531 aaKnown RBP18.04■□□□□ 0.48
USP42-207ENST00000521713 SRP68Q9UHB9 627 aaKnown RBP18.04■□□□□ 0.48
USP42-207ENST00000521713 USP31Q70CQ4 1352 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 GSPT1P15170 499 aaKnown RBP18.04■□□□□ 0.48
USP42-207ENST00000521713 ZMYM1Q5SVZ6 1142 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 SEC62Q99442 399 aaKnown RBP18.04■□□□□ 0.48
USP42-207ENST00000521713 NT5C3AQ9H0P0 336 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 AXIN2Q9Y2T1 843 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 ZNF521Q96K83 1311 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 TULP4Q9NRJ4 1543 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 TTLL6Q8N841 843 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 MASTLQ96GX5 879 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 VPS54Q9P1Q0 977 aa18.04■□□□□ 0.48
USP42-207ENST00000521713 KLRF2D3W0D1 207 aa18.03■□□□□ 0.48
USP42-207ENST00000521713 CALUO43852 315 aaPredicted RBP18.03■□□□□ 0.48
USP42-207ENST00000521713 SLFN13Q68D06 897 aa18.03■□□□□ 0.48
USP42-207ENST00000521713 OSBPL3Q9H4L5 887 aa18.03■□□□□ 0.48
USP42-207ENST00000521713 PPP2R3AQ06190 1150 aa18.03■□□□□ 0.48
USP42-207ENST00000521713 DCAF17Q5H9S7 520 aaPredicted RBP18.03■□□□□ 0.48
USP42-207ENST00000521713 KCNJ14Q9UNX9 436 aa18.03■□□□□ 0.48
USP42-207ENST00000521713 ARID5AQ03989 594 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms