RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 GPT2Q8TD30 523 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 TMEM87BQ96K49 555 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 CCDC85AQ96PX6 553 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 ANKRD2Q9GZV1 360 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 SCAND2PQ9GZW5 306 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 CCNL1Q9UK58 526 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 TAF6LQ9Y6J9 622 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 UBR3Q6ZT12 1888 aa7.87□□□□□ -1.15
CTNNA1-228ENST00000521640 CHD4Q14839 1912 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 MYH15Q9Y2K3 1946 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 AFF2P51816 1311 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 ZNF532Q9HCE3 1301 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 SNRPBP14678 240 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 KRT85P78386 507 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 FGD1P98174 961 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 TRDNQ13061 729 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 CAVIN1Q6NZI2 390 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 MRPL14Q6P1L8 145 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 LRSAM1Q6UWE0 723 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 TPTE2Q6XPS3 522 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 RALYLQ86SE5 291 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 MEIOBQ8N635 442 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 FAM184AQ8NB25 1140 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 ZNF784Q8NCA9 323 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 BRF1Q92994 677 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 NLRP3Q96P20 1036 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 STRBPQ96SI9 672 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 SETDB2Q96T68 719 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 PUS7LQ9H0K6 701 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 GZF1Q9H116 711 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 CNNM2Q9H8M5 875 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 PIH1D3Q9NQM4 214 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 SEC31BQ9NQW1 1179 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 DENND2AQ9ULE3 1009 aa7.86□□□□□ -1.15
CTNNA1-228ENST00000521640 PATL2C9JE40 543 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 LILRA1O75019 489 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 IDH1O75874 414 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 CHGBP05060 677 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 SCRN1Q12765 414 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 CAVIN4Q5BKX8 364 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 CCDC183Q5T5S1 534 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 MEX3CQ5U5Q3 659 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 TBC1D9BQ66K14 1250 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 GIMAP6Q6P9H5 292 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 C15orf52Q6ZUT6 534 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 USP48Q86UV5 1035 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 NECAB1Q8N987 351 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 NSUN7Q8NE18 718 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 ANP32BQ92688 251 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 AIDAQ96BJ3 306 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 ZFP42Q96MM3 310 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 NACAP1Q9BZK3 213 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 MYH13Q9UKX3 1938 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 CACNA1SQ13698 1873 aa7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 MYO5AQ9Y4I1 1855 aaKnown RBP7.85□□□□□ -1.15
CTNNA1-228ENST00000521640 RGPD3A6NKT7 1758 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 RGPD4Q7Z3J3 1758 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 TCHHQ07283 1943 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 TNRC6CQ9HCJ0 1690 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 VPS37CA5D8V6 355 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 PRC1O43663 620 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 CDKL5O76039 1030 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 PDIA3P30101 505 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 ADD1P35611 737 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 LIFRP42702 1097 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 RPS8P62241 208 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 DHX9Q08211 1270 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 CCDC173Q0VFZ6 552 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 RESTQ13127 1097 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 PI16Q6UXB8 463 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 Q6ZVU0 165 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 SGMS1Q86VZ5 419 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 NBPF5PQ86XG9 351 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 GAS2L3Q86XJ1 694 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 TRIM47Q96LD4 638 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 PURBQ96QR8 312 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 PPP1R9BQ96SB3 815 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 KRT23Q9C075 422 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 RNF41Q9H4P4 317 aaPredicted RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 TMEM63CQ9P1W3 806 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 ANAPC4Q9UJX5 808 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 CFAP45Q9UL16 551 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 ANGEL1Q9UNK9 670 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 MINPP1Q9UNW1 487 aa7.84□□□□□ -1.15
CTNNA1-228ENST00000521640 LRRC37AA6NMS7 1700 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 STK36Q9NRP7 1315 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 COL4A1P02462 1669 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 PTPDC1A2A3K4 754 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 A6NJR5 290 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 GTF2E1P29083 439 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 NASPP49321 788 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 MCCD1P59942 119 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 COL9A3Q14050 684 aaPredicted RBP7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 PPP2R5BQ15173 497 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 TRAPPC3LQ5T215 181 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 C6orf118Q5T5N4 469 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 TTLL5Q6EMB2 1281 aa7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 CPLX2Q6PUV4 134 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-228ENST00000521640 FAM196AQ6ZSG2 479 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms