RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 CCDC144BQ3MJ40 725 aa10.04□□□□□ -0.8
NUDCD1-204ENST00000521439 PRAMEF13Q5VWM6 474 aa10.04□□□□□ -0.8
NUDCD1-204ENST00000521439 TTC6Q86TZ1 520 aa10.04□□□□□ -0.8
NUDCD1-204ENST00000521439 FOXQ1Q9C009 403 aa10.04□□□□□ -0.8
NUDCD1-204ENST00000521439 TNKS2Q9H2K2 1166 aa10.04□□□□□ -0.8
NUDCD1-204ENST00000521439 A0A1W2PQH9 124 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 LRIG2O94898 1065 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 ACRP10323 421 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 LRP8Q14114 963 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 MAP7Q14244 749 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 ZDHHC13Q8IUH4 622 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 PHACTR4Q8IZ21 702 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 SLC9A7Q96T83 725 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 DPH2Q9BQC3 489 aaPredicted RBP10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 OSBPL2Q9H1P3 480 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 SIRPGQ9P1W8 387 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 SLC12A7Q9Y666 1083 aa10.03□□□□□ -0.8
NUDCD1-204ENST00000521439 U2SURPO15042 1029 aaKnown RBP10.02□□□□□ -0.81
NUDCD1-204ENST00000521439 SERINC3Q13530 473 aa10.02□□□□□ -0.81
NUDCD1-204ENST00000521439 ARMCX6Q7L4S7 300 aa10.02□□□□□ -0.81
NUDCD1-204ENST00000521439 MFSD2AQ8NA29 543 aa10.02□□□□□ -0.81
NUDCD1-204ENST00000521439 GIMAP7Q8NHV1 300 aa10.02□□□□□ -0.81
NUDCD1-204ENST00000521439 CCDC74BQ96LY2 380 aa10.02□□□□□ -0.81
NUDCD1-204ENST00000521439 CCNFP41002 786 aa10.01□□□□□ -0.81
NUDCD1-204ENST00000521439 ARTNQ5T4W7 220 aa10.01□□□□□ -0.81
NUDCD1-204ENST00000521439 UNC5AQ6ZN44 842 aa10.01□□□□□ -0.81
NUDCD1-204ENST00000521439 SHKBP1Q8TBC3 707 aa10.01□□□□□ -0.81
NUDCD1-204ENST00000521439 CYB5D2Q8WUJ1 264 aa10.01□□□□□ -0.81
NUDCD1-204ENST00000521439 MFSD14AQ96MC6 490 aa10.01□□□□□ -0.81
NUDCD1-204ENST00000521439 KIF2CQ99661 725 aa10.01□□□□□ -0.81
NUDCD1-204ENST00000521439 LGR6Q9HBX8 967 aa10.01□□□□□ -0.81
NUDCD1-204ENST00000521439 LOC105371045A0A1W2PR82 267 aa10□□□□□ -0.81
NUDCD1-204ENST00000521439 RGS13O14921 159 aa10□□□□□ -0.81
NUDCD1-204ENST00000521439 ZYXQ15942 572 aaKnown RBP10□□□□□ -0.81
NUDCD1-204ENST00000521439 FXNQ16595 210 aa10□□□□□ -0.81
NUDCD1-204ENST00000521439 SEZ6L2Q6UXD5 910 aa10□□□□□ -0.81
NUDCD1-204ENST00000521439 MKL1Q969V6 931 aa10□□□□□ -0.81
NUDCD1-204ENST00000521439 PSMG3-AS1Q96PY0 264 aa10□□□□□ -0.81
NUDCD1-204ENST00000521439 ZSWIM4Q9H7M6 989 aa10□□□□□ -0.81
NUDCD1-204ENST00000521439 ZFP64Q9NPA5 681 aa10□□□□□ -0.81
NUDCD1-204ENST00000521439 DYNC1LI2O43237 492 aaPredicted RBP9.99□□□□□ -0.81
NUDCD1-204ENST00000521439 TGFB1P01137 390 aa9.99□□□□□ -0.81
NUDCD1-204ENST00000521439 POLR2BP30876 1174 aaKnown RBP9.99□□□□□ -0.81
NUDCD1-204ENST00000521439 GBP1P32455 592 aa9.99□□□□□ -0.81
NUDCD1-204ENST00000521439 LARP1BQ659C4 914 aaKnown RBP9.99□□□□□ -0.81
NUDCD1-204ENST00000521439 CELF2-AS1Q8N7Q2 184 aa9.99□□□□□ -0.81
NUDCD1-204ENST00000521439 XAGE3Q8WTP9 111 aa9.99□□□□□ -0.81
NUDCD1-204ENST00000521439 WDR64B1ANS9 1081 aa9.98□□□□□ -0.81
NUDCD1-204ENST00000521439 GRIK1P39086 918 aa9.98□□□□□ -0.81
NUDCD1-204ENST00000521439 CPSF6Q16630 551 aaKnown RBP eCLIP9.98□□□□□ -0.81
NUDCD1-204ENST00000521439 DDR2Q16832 855 aa9.98□□□□□ -0.81
NUDCD1-204ENST00000521439 BAHD1Q8TBE0 780 aaPredicted RBP9.98□□□□□ -0.81
NUDCD1-204ENST00000521439 ST7Q9NRC1 585 aa9.98□□□□□ -0.81
NUDCD1-204ENST00000521439 ATG3Q9NT62 314 aa9.98□□□□□ -0.81
NUDCD1-204ENST00000521439 LTBP3Q9NS15 1303 aa9.98□□□□□ -0.81
NUDCD1-204ENST00000521439 SHROOM4Q9ULL8 1493 aa9.98□□□□□ -0.81
NUDCD1-204ENST00000521439 FAM86C2PA6NEL3 165 aa9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 COBLO75128 1261 aa9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 F13BP05160 661 aa9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 NFE2L2Q16236 605 aa9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 ZAR1Q86SH2 424 aa9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 TBC1D32Q96NH3 1257 aa9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 METTL22Q9BUU2 404 aaPredicted RBP9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 PHAXQ9H814 394 aaKnown RBP9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 C1GALT1Q9NS00 363 aa9.97□□□□□ -0.81
NUDCD1-204ENST00000521439 PRR19A6NJB7 356 aa9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 HYAL3O43820 417 aaPredicted RBP9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 UBOX5O94941 541 aa9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 CD97P48960 835 aa9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 BMS1Q14692 1282 aaKnown RBP9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 INTS5Q6P9B9 1019 aaKnown RBP9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 NOP9Q86U38 636 aaKnown RBP9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 MICAL1Q8TDZ2 1067 aa9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 DHRS1Q96LJ7 313 aa9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 OSBPL1AQ9BXW6 950 aa9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 PRDM10Q9NQV6 1147 aa9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 CEP131Q9UPN4 1083 aa9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 CDK11AQ9UQ88 783 aaPredicted RBP9.96□□□□□ -0.82
NUDCD1-204ENST00000521439 CDK5R2Q13319 367 aa9.95□□□□□ -0.82
NUDCD1-204ENST00000521439 LETMD1Q6P1Q0 360 aa9.95□□□□□ -0.82
NUDCD1-204ENST00000521439 PPP1R13LQ8WUF5 828 aa9.95□□□□□ -0.82
NUDCD1-204ENST00000521439 MIPEPQ99797 713 aa9.95□□□□□ -0.82
NUDCD1-204ENST00000521439 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.95□□□□□ -0.82
NUDCD1-204ENST00000521439 PIF1Q9H611 641 aa9.95□□□□□ -0.82
NUDCD1-204ENST00000521439 MSRB2Q9Y3D2 182 aa9.95□□□□□ -0.82
NUDCD1-204ENST00000521439 DDAH1O94760 285 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 SLITRK5O94991 958 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 SSTR4P31391 388 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 ADMP35318 185 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 VHLLQ6RSH7 139 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 LRP10Q7Z4F1 713 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 FAM178BQ8IXR5 827 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 TMEM192Q8IY95 271 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 SLC6A18Q96N87 628 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 SRPK1Q96SB4 655 aaKnown RBP9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 CCDC113Q9H0I3 377 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 PIM2Q9P1W9 311 aa9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 ZNF214Q9UL59 606 aaPredicted RBP9.94□□□□□ -0.82
NUDCD1-204ENST00000521439 MAPK8IP1Q9UQF2 711 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms