RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 UTYO14607 1347 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 MSCO60682 206 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 IGKV5-2P06315 115 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 NEFLP07196 543 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 ACRP10323 421 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 CNGA1P29973 690 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 CYP2C19P33261 490 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 COL9A2Q14055 689 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 KCTD2Q14681 263 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 GPR142Q7Z601 462 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 ARRDC4Q8NCT1 418 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 TEKT1Q969V4 418 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 CNTNAP3BQ96NU0 1288 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 MPHOSPH8Q99549 860 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 MRIQ9BWK5 157 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 CNTNAP3Q9BZ76 1288 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 TMEM39AQ9NV64 488 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 RBPJLQ9UBG7 517 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 FAM198AQ9UFP1 575 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 CIZ1Q9ULV3 898 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 GBF1Q92538 1859 aa9.29□□□□□ -0.92
CTNNA1-227ENST00000521387 A0A0G2JMZ2 1700 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 TIMP1P01033 207 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 CYBAP13498 195 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 IL9P15248 144 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 GYG1P46976 350 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 ID4P47928 161 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 MAP2K5Q13163 448 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 LRRC41Q15345 812 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 MFSD5Q6N075 450 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 ASCL5Q7RTU5 278 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 PROCA1Q8NCQ7 364 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 SLC44A5Q8NCS7 719 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 FAM84BQ96KN1 310 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 MFSD14AQ96MC6 490 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 ZSWIM6Q9HCJ5 1215 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 PICK1Q9NRD5 415 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 BABAM1Q9NWV8 329 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 HYPKQ9NX55 129 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 TMOD2Q9NZR1 351 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 GAKO14976 1311 aa9.28□□□□□ -0.92
CTNNA1-227ENST00000521387 VPS13AQ96RL7 3174 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 KBTBD13C9JR72 458 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 PQBP1O60828 265 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 CSF1RP07333 972 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 CSF2RAP15509 400 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 SSTR3P32745 418 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 LSM11P83369 360 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 MFSD14CQ5VZR4 134 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 SH3BP5LQ7L8J4 393 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 GPRC5AQ8NFJ5 357 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 NPLOC4Q8TAT6 608 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 EDC3Q96F86 508 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 METTL22Q9BUU2 404 aaPredicted RBP9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 TBX21Q9UL17 535 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 PLXNA3P51805 1871 aa9.27□□□□□ -0.93
CTNNA1-227ENST00000521387 ARHGEF15O94989 841 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 MAPK4P31152 587 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 HMGCS2P54868 508 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 SPP2Q13103 211 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 CDC42EP5Q6NZY7 148 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 PLEKHH3Q7Z736 793 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 CERS4Q9HA82 394 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 PHF24Q9UPV7 400 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 A0A1B0GUL6 1792 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 ZNF521Q96K83 1311 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 COL4A6Q14031 1691 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 DMXL1Q9Y485 3027 aa9.26□□□□□ -0.93
CTNNA1-227ENST00000521387 MYH3P11055 1940 aa9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 MAP1BP46821 2468 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 ANKRD11Q6UB99 2663 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 H7C1W4 665 aa9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 GTPBP6O43824 516 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 LPXNO60711 386 aa9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 SLC5A1P13866 664 aa9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 HIBADHP31937 336 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 PPIGQ13427 754 aaKnown RBP eCLIP9.25□□□□□ -0.931e-7■□□□□ 9.7
CTNNA1-227ENST00000521387 HHIPL2Q6UWX4 724 aa9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 ANKRD33Q7Z3H0 272 aa9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 CFAP53Q96M91 514 aa9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 PLA2G12BQ9BX93 195 aa9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 RALYQ9UKM9 306 aaKnown RBP9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 NDUFB9Q9Y6M9 179 aa9.25□□□□□ -0.93
CTNNA1-227ENST00000521387 LOC285556D6RIA3 1793 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 WDR87Q6ZQQ6 2873 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 SOWAHBA6NEL2 793 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 CHL1O00533 1208 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 CTNND1O60716 968 aaKnown RBP9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 HOXC6P09630 235 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 CASP7P55210 303 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 HERVK_113P62684 666 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 ERVK-9P63128 1117 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 ERVK-24P63145 666 aa9.24□□□□□ -0.93
CTNNA1-227ENST00000521387 IRX6P78412 446 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms