RNA–Protein interactions for RNA: ENST00000520963.2

IGHV7-40-201, Transcript of immunoglobulin heavy variable 7-40 (pseudogene), humanhuman

BASIC

Gene IGHV7-40, Length 296 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV7-40-201ENST00000520963 APOBRQ0VD83 1088 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 TROAPQ12815 778 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 RRP1BQ14684 758 aaKnown RBP9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 SUPT20HL1Q3ZLR7 823 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 DCAF15Q66K64 600 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 APOA5Q6Q788 366 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 TMEM179Q6ZVK1 233 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 SULF1Q8IWU6 871 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 STK11IPQ8N1F8 1099 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 GTF3C6Q969F1 213 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 MKL1Q969V6 931 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 LLPHQ9BRT6 129 aaKnown RBP9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 TRIM34Q9BYJ4 488 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 KANSL2Q9H9L4 492 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 SENP2Q9HC62 589 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 MTMR4Q9NYA4 1195 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 NYAP2Q9P242 653 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 HPS5Q9UPZ3 1129 aa9.31□□□□□ -0.92
IGHV7-40-201ENST00000520963 SSC5DA1L4H1 1573 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 KLF18A0A0U1RQI7 1052 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 GOLGA6L3A6NEY3 463 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 NMT2O60551 498 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 CTNND1O60716 968 aaKnown RBP9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 CALM1P0DP23 149 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 CALM2P0DP24 149 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 CALM3P0DP25 149 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 SLURP2P0DP57 97 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 TOP1P11387 765 aaKnown RBP9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 CAP2P40123 477 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 NUCB2P80303 420 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 ABCB5Q2M3G0 1257 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 IFIT1BQ5T764 474 aaKnown RBP9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 NBPF12Q5TAG4 269 aaPredicted RBP9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 CDC37L1Q7L3B6 337 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 ZNF654Q8IZM8 581 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 FAM43AQ8N2R8 423 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 CEP95Q96GE4 821 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 ZKSCAN3Q9BRR0 538 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 ZNF341Q9BYN7 854 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 SLC12A7Q9Y666 1083 aa9.3□□□□□ -0.92
IGHV7-40-201ENST00000520963 CCDC69A6NI79 296 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 UNCXA6NJT0 531 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 ZBTB43O43298 467 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 DHX16O60231 1041 aaKnown RBP9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 BAG4O95429 457 aaKnown RBP9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 TTLL1O95922 423 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 ASNSP08243 561 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 SNHG28P0DPA3 235 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 MRE11P49959 708 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 JAG1P78504 1218 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 SCRN1Q12765 414 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 MAP3K11Q16584 847 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 NOL9Q5SY16 702 aaKnown RBP9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 SYNE3Q6ZMZ3 975 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 KRT26Q7Z3Y9 468 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 CATIPQ7Z7H3 387 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 LDHDQ86WU2 507 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 SIAH1Q8IUQ4 282 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 RGS22Q8NE09 1264 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 SMARCC2Q8TAQ2 1214 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 KLRG1Q96E93 195 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 TMEM47Q9BQJ4 181 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 CABP5Q9NP86 173 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 FAM217BQ9NTX9 383 aaPredicted RBP9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 ZBTB21Q9ULJ3 1066 aa9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.29□□□□□ -0.92
IGHV7-40-201ENST00000520963 CCDC196A0A1B0GTZ2 297 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 GOLGA8BA8MQT2 603 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 GH2P01242 217 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 PDIA4P13667 645 aaKnown RBP9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 SMARCA1P28370 1054 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 NTRK3Q16288 839 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 NFXL1Q6ZNB6 911 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 MIGA2Q7L4E1 593 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 FANCBQ8NB91 859 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 PNMA1Q8ND90 353 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 LARP6Q9BRS8 491 aaKnown RBP9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 KAT14Q9H8E8 782 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 RRAGCQ9HB90 399 aa9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 RBM28Q9NW13 759 aaKnown RBP9.28□□□□□ -0.92
IGHV7-40-201ENST00000520963 PALM3A6NDB9 673 aaPredicted RBP9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 GOLGA8AA7E2F4 631 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 ADM5C9JUS6 153 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 USP2O75604 605 aaPredicted RBP9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 GDF11O95390 407 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 CTDNEP1O95476 244 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 HSP90AA1P07900 732 aaKnown RBP9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 EEF2P13639 858 aaKnown RBP9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 METAP2P50579 478 aaKnown RBP eCLIP9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 HMGN5P82970 282 aaKnown RBP9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 ICA1Q05084 483 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 FUT2Q10981 343 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 GRM4Q14833 912 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 SEPT2Q15019 361 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 RTN1Q16799 776 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 KLHL40Q2TBA0 621 aa9.27□□□□□ -0.93
IGHV7-40-201ENST00000520963 NOL8Q76FK4 1167 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms