RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 SEZ6L2Q6UXD5 910 aa10.4□□□□□ -0.74
SDCBP-208ENST00000520228 UBE3DQ7Z6J8 389 aa10.4□□□□□ -0.74
SDCBP-208ENST00000520228 SMYD4Q8IYR2 804 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-208ENST00000520228 EHMT1Q9H9B1 1298 aa10.4□□□□□ -0.74
SDCBP-208ENST00000520228 ZNF518AQ6AHZ1 1483 aa10.4□□□□□ -0.74
SDCBP-208ENST00000520228 MAGI2Q86UL8 1455 aa10.4□□□□□ -0.74
SDCBP-208ENST00000520228 MSTNO14793 375 aa10.39□□□□□ -0.75
SDCBP-208ENST00000520228 GRIN3BO60391 1043 aa10.39□□□□□ -0.75
SDCBP-208ENST00000520228 COL9A2Q14055 689 aaPredicted RBP10.39□□□□□ -0.75
SDCBP-208ENST00000520228 PRR23CQ6ZRP0 262 aa10.39□□□□□ -0.75
SDCBP-208ENST00000520228 GINM1Q9NU53 330 aa10.39□□□□□ -0.75
SDCBP-208ENST00000520228 ADAM30Q9UKF2 790 aa10.39□□□□□ -0.75
SDCBP-208ENST00000520228 TRAPPC8Q9Y2L5 1435 aa10.39□□□□□ -0.75
SDCBP-208ENST00000520228 FRMPD1Q5SYB0 1578 aa10.39□□□□□ -0.75
SDCBP-208ENST00000520228 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 ARHGEF12Q9NZN5 1544 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 PLEKHH2Q8IVE3 1493 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 NFICP08651 508 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 ATF4P18848 351 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-208ENST00000520228 RAB6AP20340 208 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 CLCQ05315 142 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 PDE4BQ07343 736 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 DOC2BQ14184 412 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 NKAPLQ5M9Q1 402 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 TMEM201Q5SNT2 666 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 CLEC10AQ8IUN9 316 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 ZNF507Q8TCN5 953 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 SEC16BQ96JE7 1060 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 FAM83CQ9BQN1 747 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 YIPF2Q9BWQ6 316 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 FBRSQ9HAH7 460 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 PICK1Q9NRD5 415 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 PCOLCE2Q9UKZ9 415 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 YEATS2Q9ULM3 1422 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 KIAA1107Q9UPP5 1409 aa10.38□□□□□ -0.75
SDCBP-208ENST00000520228 SPAG9O60271 1321 aaKnown RBP10.37□□□□□ -0.75
SDCBP-208ENST00000520228 PREX2Q70Z35 1606 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 RNGTTO60942 597 aaKnown RBP10.37□□□□□ -0.75
SDCBP-208ENST00000520228 HTR3BO95264 441 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 IGHA1P01876 353 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 H2AFB2P0C5Z0 115 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 CAP2P40123 477 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 ZNF165P49910 485 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 ETF1P62495 437 aaKnown RBP10.37□□□□□ -0.75
SDCBP-208ENST00000520228 GNL2Q13823 731 aaKnown RBP10.37□□□□□ -0.75
SDCBP-208ENST00000520228 GPAT2Q6NUI2 795 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 BEND4Q6ZU67 534 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 GMLQ99445 158 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 EFR3BQ9Y2G0 817 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 RAXQ9Y2V3 346 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 PCDHB14Q9Y5E9 798 aa10.37□□□□□ -0.75
SDCBP-208ENST00000520228 FAM95CA0A1B0GW59 222 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 DYNC1LI2O43237 492 aaPredicted RBP10.36□□□□□ -0.75
SDCBP-208ENST00000520228 PGRP06401 933 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 PLCG1P19174 1290 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 MAP7Q14244 749 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 SLBPQ14493 270 aaKnown RBP eCLIP10.36□□□□□ -0.75
SDCBP-208ENST00000520228 KCT2Q8NC54 265 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 ACSF2Q96CM8 615 aaPredicted RBP10.36□□□□□ -0.75
SDCBP-208ENST00000520228 PSMG3-AS1Q96PY0 264 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 KCNF1Q9H3M0 494 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 TJP2Q9UDY2 1190 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 DAGLAQ9Y4D2 1042 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 ABCC1P33527 1531 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 ZMYM4Q5VZL5 1548 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 ZFYVE16Q7Z3T8 1539 aa10.36□□□□□ -0.75
SDCBP-208ENST00000520228 MCM4P33991 863 aa10.35□□□□□ -0.75
SDCBP-208ENST00000520228 NKG7Q16617 165 aa10.35□□□□□ -0.75
SDCBP-208ENST00000520228 RSPO4Q2I0M5 234 aaPredicted RBP10.35□□□□□ -0.75
SDCBP-208ENST00000520228 GK5Q6ZS86 529 aa10.35□□□□□ -0.75
SDCBP-208ENST00000520228 HID1Q8IV36 788 aa10.35□□□□□ -0.75
SDCBP-208ENST00000520228 MRPL41Q8IXM3 137 aaKnown RBP10.35□□□□□ -0.75
SDCBP-208ENST00000520228 C7orf69Q9H7B7 122 aa10.35□□□□□ -0.75
SDCBP-208ENST00000520228 C1GALT1Q9NS00 363 aa10.35□□□□□ -0.75
SDCBP-208ENST00000520228 REV1Q9UBZ9 1251 aa10.35□□□□□ -0.75
SDCBP-208ENST00000520228 ATP10AO60312 1499 aa10.35□□□□□ -0.75
SDCBP-208ENST00000520228 MLH3Q9UHC1 1453 aa10.35□□□□□ -0.75
SDCBP-208ENST00000520228 CDC42BPBQ9Y5S2 1711 aa10.34□□□□□ -0.75
SDCBP-208ENST00000520228 HMX2A2RU54 273 aa10.34□□□□□ -0.75
SDCBP-208ENST00000520228 DNAJA2O60884 412 aa10.34□□□□□ -0.75
SDCBP-208ENST00000520228 RXRBP28702 533 aa10.34□□□□□ -0.75
SDCBP-208ENST00000520228 MCATQ8IVS2 390 aaKnown RBP10.34□□□□□ -0.75
SDCBP-208ENST00000520228 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.34□□□□□ -0.75
SDCBP-208ENST00000520228 STOML1Q9UBI4 398 aa10.34□□□□□ -0.75
SDCBP-208ENST00000520228 ZNRF3Q9ULT6 936 aa10.34□□□□□ -0.75
SDCBP-208ENST00000520228 ARHGEF40Q8TER5 1519 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 SYCP2Q9BX26 1530 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
SDCBP-208ENST00000520228 NASPP49321 788 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-208ENST00000520228 MLECQ14165 292 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 PAOXQ6QHF9 649 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 CDC37L1Q7L3B6 337 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 GATA6Q92908 595 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 PRKAG2Q9UGJ0 569 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 SAMD9LQ8IVG5 1584 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 CDC42BPAQ5VT25 1732 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 MYOM3Q5VTT5 1437 aa10.33□□□□□ -0.76
SDCBP-208ENST00000520228 KDM5CP41229 1560 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms