RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 TOMM22Q9NS69 142 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 LOC285556D6RIA3 1793 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 BTBD19C9JJ37 291 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 CA12O43570 354 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 HMGCS2P54868 508 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 ICA1Q05084 483 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 DGKZQ13574 1117 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 ZYXQ15942 572 aaKnown RBP14.07□□□□□ -0.16
HPS4-218ENST00000519774 OTUD7BQ6GQQ9 843 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 FAM43AQ8N2R8 423 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 WDR18Q9BV38 432 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 INCENPQ9NQS7 918 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 ANAPC4Q9UJX5 808 aa14.07□□□□□ -0.16
HPS4-218ENST00000519774 GREB1LQ9C091 1923 aaPredicted RBP14.07□□□□□ -0.16
HPS4-218ENST00000519774 USP17L10C9JJH3 530 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 TBC1D8O95759 1140 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 ALDH1A1P00352 501 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 PTH1RQ03431 593 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 MOGSQ13724 837 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 TAF1CQ15572 869 aaPredicted RBP14.06□□□□□ -0.16
HPS4-218ENST00000519774 RRP12Q5JTH9 1297 aaKnown RBP14.06□□□□□ -0.16
HPS4-218ENST00000519774 KIAA1211Q6ZU35 1233 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 FASTKD5Q7L8L6 764 aaKnown RBP14.06□□□□□ -0.16
HPS4-218ENST00000519774 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
HPS4-218ENST00000519774 ACER1Q8TDN7 264 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 NBPF3Q9H094 633 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 SAGE1Q9NXZ1 904 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 CTNNA3Q9UI47 895 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.06□□□□□ -0.16
HPS4-218ENST00000519774 TACC3Q9Y6A5 838 aa14.06□□□□□ -0.16
HPS4-218ENST00000519774 ZNF213O14771 459 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 TSPY3P0CV98 308 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 TSPY8P0CW00 308 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 HSPA8P11142 646 aaKnown RBP14.05□□□□□ -0.16
HPS4-218ENST00000519774 CTCFP49711 727 aaPredicted RBP14.05□□□□□ -0.16
HPS4-218ENST00000519774 BACE1P56817 501 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 IMMTQ16891 758 aaKnown RBP14.05□□□□□ -0.16
HPS4-218ENST00000519774 FAM47AQ5JRC9 791 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 ANKRD23Q86SG2 305 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 TBC1D10CQ8IV04 446 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 ARHGEF10LQ9HCE6 1279 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 TMOD4Q9NZQ9 345 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
HPS4-218ENST00000519774 TSPY2A6NKD2 308 aa14.04□□□□□ -0.16
HPS4-218ENST00000519774 PDHXO00330 501 aa14.04□□□□□ -0.16
HPS4-218ENST00000519774 RANBP6O60518 1105 aaKnown RBP14.04□□□□□ -0.16
HPS4-218ENST00000519774 LBX1P52954 281 aa14.04□□□□□ -0.16
HPS4-218ENST00000519774 CRHR2Q13324 411 aa14.04□□□□□ -0.16
HPS4-218ENST00000519774 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
HPS4-218ENST00000519774 AKNAD1Q5T1N1 836 aa14.04□□□□□ -0.16
HPS4-218ENST00000519774 TREML2Q5T2D2 321 aa14.04□□□□□ -0.16
HPS4-218ENST00000519774 GPAT2Q6NUI2 795 aa14.04□□□□□ -0.16
HPS4-218ENST00000519774 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
HPS4-218ENST00000519774 A0A1W2PRG0 241 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 C19orf81C9J6K1 198 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 ORC4O43929 436 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 EEF2P13639 858 aaKnown RBP14.03□□□□□ -0.16
HPS4-218ENST00000519774 TFAP4Q01664 338 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 USP17L2Q6R6M4 530 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 MFSD6Q6ZSS7 791 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
HPS4-218ENST00000519774 STAG1Q8WVM7 1258 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.03□□□□□ -0.16
HPS4-218ENST00000519774 LSG1Q9H089 658 aaKnown RBP14.03□□□□□ -0.16
HPS4-218ENST00000519774 R3HDMLQ9H3Y0 253 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 RNF41Q9H4P4 317 aaPredicted RBP14.03□□□□□ -0.16
HPS4-218ENST00000519774 KANSL2Q9H9L4 492 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 AGTPBP1Q9UPW5 1226 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 NEDD4P46934 1319 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 MYH4Q9Y623 1939 aa14.03□□□□□ -0.16
HPS4-218ENST00000519774 PLIN4Q96Q06 1357 aa14.02□□□□□ -0.17
HPS4-218ENST00000519774 RAD21O60216 631 aa14.02□□□□□ -0.17
HPS4-218ENST00000519774 USP14P54578 494 aa14.02□□□□□ -0.17
HPS4-218ENST00000519774 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.17
HPS4-218ENST00000519774 PARK7Q99497 189 aaKnown RBP14.02□□□□□ -0.17
HPS4-218ENST00000519774 KIAA1683Q9H0B3 1180 aa14.02□□□□□ -0.17
HPS4-218ENST00000519774 SH2D4AQ9H788 454 aa14.02□□□□□ -0.17
HPS4-218ENST00000519774 ZFYVE28Q9HCC9 887 aa14.02□□□□□ -0.17
HPS4-218ENST00000519774 ZCCHC17Q9NP64 241 aaKnown RBP14.02□□□□□ -0.17
HPS4-218ENST00000519774 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.17
HPS4-218ENST00000519774 RBM8AQ9Y5S9 174 aaKnown RBP14.02□□□□□ -0.17
HPS4-218ENST00000519774 IGKV6D-41A0A0C4DH26 115 aa14.01□□□□□ -0.17
HPS4-218ENST00000519774 FGRP09769 529 aa14.01□□□□□ -0.17
HPS4-218ENST00000519774 CYP2C8P10632 490 aa14.01□□□□□ -0.17
HPS4-218ENST00000519774 PABPC4Q13310 644 aaKnown RBP eCLIP14.01□□□□□ -0.17
HPS4-218ENST00000519774 SIAH1Q8IUQ4 282 aa14.01□□□□□ -0.17
HPS4-218ENST00000519774 MAP4K1Q92918 833 aa14.01□□□□□ -0.17
HPS4-218ENST00000519774 CEP95Q96GE4 821 aa14.01□□□□□ -0.17
HPS4-218ENST00000519774 C12orf42Q96LP6 360 aa14.01□□□□□ -0.17
HPS4-218ENST00000519774 CFHR5Q9BXR6 569 aa14.01□□□□□ -0.17
HPS4-218ENST00000519774 CASP8AP2Q9UKL3 1982 aa14□□□□□ -0.17
HPS4-218ENST00000519774 NMT2O60551 498 aa14□□□□□ -0.17
HPS4-218ENST00000519774 CYP21A2P08686 494 aa14□□□□□ -0.17
HPS4-218ENST00000519774 PCP11498 1178 aaKnown RBP14□□□□□ -0.17
HPS4-218ENST00000519774 VCAM1P19320 739 aa14□□□□□ -0.17
HPS4-218ENST00000519774 IRX3P78415 501 aaPredicted RBP14□□□□□ -0.17
HPS4-218ENST00000519774 SPICE1Q8N0Z3 855 aa14□□□□□ -0.17
HPS4-218ENST00000519774 SMCR8Q8TEV9 937 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms