RNA–Protein interactions for RNA: ENST00000519589.1

KCNQ3-203, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 2

Gene KCNQ3, Length 3,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-203ENST00000519589 FAM177A1Q8N128 213 aaPredicted RBP9.62□□□□□ -0.87
KCNQ3-203ENST00000519589 CEP112Q8N8E3 955 aa9.62□□□□□ -0.87
KCNQ3-203ENST00000519589 DRAXINQ8NBI3 349 aaPredicted RBP9.62□□□□□ -0.87
KCNQ3-203ENST00000519589 KIF9Q9HAQ2 790 aa9.62□□□□□ -0.87
KCNQ3-203ENST00000519589 DDX21Q9NR30 783 aaKnown RBP eCLIP9.62□□□□□ -0.87
KCNQ3-203ENST00000519589 SNRKQ9NRH2 765 aa9.62□□□□□ -0.87
KCNQ3-203ENST00000519589 PUF60Q9UHX1 559 aaKnown RBP9.62□□□□□ -0.87
KCNQ3-203ENST00000519589 A0A087WZG4 1122 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 PFKFB2O60825 505 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 SERPINB2P05120 415 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 PECAM1P16284 738 aaPredicted RBP9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 TUBB4BP68371 445 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 AMPD2Q01433 879 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 GUCY1B3Q02153 619 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 BEND3Q5T5X7 828 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 SDF4Q9BRK5 362 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 NAT10Q9H0A0 1025 aaKnown RBP9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 KIAA1468Q9P260 1216 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 DDX60Q8IY21 1712 aaKnown RBP9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 ALS2Q96Q42 1657 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 NBPF26B4DH59 902 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 BIN1O00499 593 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 ZEB2O60315 1214 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 STX10O60499 249 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 KINO60870 393 aaKnown RBP9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 CLSTN1O94985 981 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 SNUPNO95149 360 aaKnown RBP9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 GGCXP38435 758 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 ME1P48163 572 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 SKOR1P84550 965 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 TRAF1Q13077 416 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 AP1ARQ63HQ0 302 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 C6orf89Q6UWU4 347 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 ANKRD18AQ8IVF6 992 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 SYNE4Q8N205 404 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 NBPF15Q8N660 670 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 RTEL1Q9NZ71 1219 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 NDUFB9Q9Y6M9 179 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 PDHBP11177 359 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 PPFIA1Q13136 1202 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 GRM1Q13255 1194 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 WASHC4Q2M389 1173 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 KIF4BQ2VIQ3 1234 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 HSP90B2PQ58FF3 399 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 KIRREL3Q8IZU9 778 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 BCAS4Q8TDM0 211 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 COG1Q8WTW3 980 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 TAF6LQ9Y6J9 622 aa9.61□□□□□ -0.87
KCNQ3-203ENST00000519589 CYP19A1P11511 503 aaPredicted RBP9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 NFIXQ14938 502 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 DDX46Q7L014 1031 aaKnown RBP9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 ANKRD23Q86SG2 305 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 EDC3Q96F86 508 aaKnown RBP9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 ZBTB12Q9Y330 459 aaPredicted RBP9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 H7C1W4 665 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 CPLX1O14810 134 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 JAK2O60674 1132 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 ALDH1L1O75891 902 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 MTA1Q13330 715 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 SNX1Q13596 522 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 KRT32Q14532 448 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 CCDC13Q8IYE1 715 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 LINS1Q8NG48 757 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 FAM89AQ96GI7 184 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 SLC40A1Q9NP59 571 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 PLCH1Q4KWH8 1693 aa9.6□□□□□ -0.87
KCNQ3-203ENST00000519589 RGPD1P0DJD0 1748 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 NLRP12P59046 1061 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 CCT2P78371 535 aaKnown RBP9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 PTPN21Q16825 1174 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 C2CD5Q86YS7 1000 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 CCDC12Q8WUD4 166 aaPredicted RBP9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 SUCLG2Q96I99 432 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 ACBD3Q9H3P7 528 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 SAMM50Q9Y512 469 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 MYH8P13535 1937 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 TUBBP07437 444 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 RHOXF2BP0C7M4 288 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 TUBB2AQ13885 445 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 MTF1Q14872 753 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 NKX1-1Q15270 411 aaPredicted RBP9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 RPGRQ92834 1020 aaKnown RBP9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 BRF1Q92994 677 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 RHOXF2Q9BQY4 288 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 TUBB2BQ9BVA1 445 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 NUCKS1Q9H1E3 243 aaKnown RBP9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 SPATS2LQ9NUQ6 558 aaKnown RBP9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 H0YIN7 160 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 SLC27A2O14975 620 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 SETQ01105 290 aaPredicted RBP9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 HLFQ16534 295 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 SKIDA1Q1XH10 827 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 SPRED3Q2MJR0 410 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 TBC1D9BQ66K14 1250 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 LMBR1Q8WVP7 490 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 NEK1Q96PY6 1258 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 USP28Q96RU2 1077 aa9.59□□□□□ -0.87
KCNQ3-203ENST00000519589 GBP3Q9H0R5 595 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms