RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 MRS2Q9HD23 443 aa10.37□□□□□ -0.75
CTNNA1-215ENST00000519309 PLXNA1Q9UIW2 1896 aa10.37□□□□□ -0.75
CTNNA1-215ENST00000519309 PIEZO1Q92508 2521 aa10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 GDF11O95390 407 aa10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 SPATA5Q8NB90 893 aa10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 ARRDC4Q8NCT1 418 aa10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 NPLOC4Q8TAT6 608 aa10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 SH3RF3Q8TEJ3 882 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 PRDM5Q9NQX1 630 aaPredicted RBP10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 AKAP2Q9Y2D5 859 aa10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 IVNS1ABPQ9Y6Y0 642 aa10.36□□□□□ -0.75
CTNNA1-215ENST00000519309 MYO9BQ13459 2157 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 MYH8P13535 1937 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 TRIM43BA6NCK2 446 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 SPDYE16A6NNV3 312 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 SEPT4O43236 478 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 IGSF3O75054 1194 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 VCAM1P19320 739 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 CNGA1P29973 690 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 CYP2C19P33261 490 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 MCAMP43121 646 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 PPP4CP60510 307 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 TIMM10P62072 90 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 ATP2B2Q01814 1243 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 MTX1Q13505 466 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 ALDH1L2Q3SY69 923 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 GJC2Q5T442 439 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 CATSPERGQ6ZRH7 1159 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 FOXP4Q8IVH2 680 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 TRIM43Q96BQ3 446 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 RNPC3Q96LT9 517 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 KIAA1683Q9H0B3 1180 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 HDAC5Q9UQL6 1122 aa10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 ZNFX1Q9P2E3 1918 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-215ENST00000519309 SMCHD1A6NHR9 2005 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 GBF1Q92538 1859 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 ANP32CO43423 234 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 DNAJB2P25686 324 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 USP14P54578 494 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 TFCP2Q12800 502 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 GRIN2CQ14957 1233 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 TATDN1Q6P1N9 297 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 SH3RF1Q7Z6J0 888 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 CRACR2BQ8N4Y2 399 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 ATXN2LQ8WWM7 1075 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 NOL10Q9BSC4 688 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 EHD4Q9H223 541 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 RAI14Q9P0K7 980 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 BTBD7Q9P203 1132 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 PHF24Q9UPV7 400 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 COL11A1P12107 1806 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 CHD7Q9P2D1 2997 aa10.34□□□□□ -0.75
CTNNA1-215ENST00000519309 KIAA0355O15063 1070 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 BAG3O95817 575 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 GH2P01242 217 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 CLTBP09497 229 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 ITGB8P26012 769 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 ADORA2AP29274 412 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 EPHB4P54760 987 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 LRRC41Q15345 812 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 AKNAD1Q5T1N1 836 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 ATF7IPQ6VMQ6 1270 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 ADGRA1Q86SQ6 560 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 MAPKAPK5Q8IW41 473 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 SHCBP1Q8NEM2 672 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 TGFBRAP1Q8WUH2 860 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 FEZ1Q99689 392 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 AATFQ9NY61 560 aaKnown RBP eCLIP10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 THEGQ9P2T0 379 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 TACC3Q9Y6A5 838 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 NDUFB9Q9Y6M9 179 aa10.33□□□□□ -0.76
CTNNA1-215ENST00000519309 STRNO43815 780 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 HLA-DOAP06340 250 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 UQCRFS1P1P0C7P4 283 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 HOXD11P31277 338 aaPredicted RBP10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 TLE2Q04725 743 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 FAM47AQ5JRC9 791 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 WDR78Q5VTH9 848 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 NAA16Q6N069 864 aaPredicted RBP10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 LRP2BPQ9P2M1 347 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 RAPGEFL1Q9UHV5 662 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 NRBP1Q9UHY1 535 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 PALD1Q9ULE6 856 aa10.32□□□□□ -0.76
CTNNA1-215ENST00000519309 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 ADCYAP1R1P41586 468 aa10.31□□□□□ -0.76
CTNNA1-215ENST00000519309 FPGSQ05932 587 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms