RNA–Protein interactions for RNA: ENST00000518250.5

BRD9-215, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-215ENST00000518250 CLEC10AQ8IUN9 316 aa17.04■□□□□ 0.32
BRD9-215ENST00000518250 SAGE1Q9NXZ1 904 aa17.04■□□□□ 0.32
BRD9-215ENST00000518250 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
BRD9-215ENST00000518250 ANAPC4Q9UJX5 808 aa17.04■□□□□ 0.32
BRD9-215ENST00000518250 USP17L10C9JJH3 530 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 ZNF213O14771 459 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 TBC1D8O95759 1140 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
BRD9-215ENST00000518250 BACE1P56817 501 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 ATP2B2Q01814 1243 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 ICA1Q05084 483 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 ZYXQ15942 572 aaKnown RBP17.03■□□□□ 0.32
BRD9-215ENST00000518250 FAM47AQ5JRC9 791 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 RRP12Q5JTH9 1297 aaKnown RBP17.03■□□□□ 0.32
BRD9-215ENST00000518250 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 TMOD4Q9NZQ9 345 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 TACC3Q9Y6A5 838 aa17.03■□□□□ 0.32
BRD9-215ENST00000518250 PDHXO00330 501 aa17.02■□□□□ 0.32
BRD9-215ENST00000518250 RANBP6O60518 1105 aaKnown RBP17.02■□□□□ 0.32
BRD9-215ENST00000518250 TSPY3P0CV98 308 aa17.02■□□□□ 0.32
BRD9-215ENST00000518250 TSPY8P0CW00 308 aa17.02■□□□□ 0.32
BRD9-215ENST00000518250 HSPA8P11142 646 aaKnown RBP17.02■□□□□ 0.32
BRD9-215ENST00000518250 TAF1CQ15572 869 aaPredicted RBP17.02■□□□□ 0.32
BRD9-215ENST00000518250 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
BRD9-215ENST00000518250 GPAT2Q6NUI2 795 aa17.02■□□□□ 0.32
BRD9-215ENST00000518250 ANKRD23Q86SG2 305 aa17.02■□□□□ 0.32
BRD9-215ENST00000518250 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.32
BRD9-215ENST00000518250 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.02■□□□□ 0.32
BRD9-215ENST00000518250 C19orf81C9J6K1 198 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 LBX1P52954 281 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 TFAP4Q01664 338 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 CRHR2Q13324 411 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 TREML2Q5T2D2 321 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 USP17L2Q6R6M4 530 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 MFSD6Q6ZSS7 791 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 PROCA1Q8NCQ7 364 aaPredicted RBP17.01■□□□□ 0.31
BRD9-215ENST00000518250 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.01■□□□□ 0.31
BRD9-215ENST00000518250 NBPF3Q9H094 633 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 KANSL2Q9H9L4 492 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 ARHGEF10LQ9HCE6 1279 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
BRD9-215ENST00000518250 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
BRD9-215ENST00000518250 A0A1W2PRG0 241 aa17■□□□□ 0.31
BRD9-215ENST00000518250 TSPY2A6NKD2 308 aa17■□□□□ 0.31
BRD9-215ENST00000518250 ORC4O43929 436 aa17■□□□□ 0.31
BRD9-215ENST00000518250 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
BRD9-215ENST00000518250 R3HDMLQ9H3Y0 253 aa17■□□□□ 0.31
BRD9-215ENST00000518250 RNF41Q9H4P4 317 aaPredicted RBP17■□□□□ 0.31
BRD9-215ENST00000518250 ZFYVE28Q9HCC9 887 aa17■□□□□ 0.31
BRD9-215ENST00000518250 AGTPBP1Q9UPW5 1226 aa17■□□□□ 0.31
BRD9-215ENST00000518250 USP14P54578 494 aa16.99■□□□□ 0.31
BRD9-215ENST00000518250 NEDD1Q8NHV4 660 aa16.99■□□□□ 0.31
BRD9-215ENST00000518250 STAG1Q8WVM7 1258 aa16.99■□□□□ 0.31
BRD9-215ENST00000518250 LSG1Q9H089 658 aaKnown RBP16.99■□□□□ 0.31
BRD9-215ENST00000518250 KIAA1683Q9H0B3 1180 aa16.99■□□□□ 0.31
BRD9-215ENST00000518250 SH2D4AQ9H788 454 aa16.99■□□□□ 0.31
BRD9-215ENST00000518250 ZCCHC17Q9NP64 241 aaKnown RBP16.99■□□□□ 0.31
BRD9-215ENST00000518250 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
BRD9-215ENST00000518250 RBM8AQ9Y5S9 174 aaKnown RBP16.99■□□□□ 0.31
BRD9-215ENST00000518250 NEDD4P46934 1319 aa16.98■□□□□ 0.31
BRD9-215ENST00000518250 RAD21O60216 631 aa16.98■□□□□ 0.31
BRD9-215ENST00000518250 FGRP09769 529 aa16.98■□□□□ 0.31
BRD9-215ENST00000518250 CYP2C8P10632 490 aa16.98■□□□□ 0.31
BRD9-215ENST00000518250 PCP11498 1178 aaKnown RBP16.98■□□□□ 0.31
BRD9-215ENST00000518250 SIAH1Q8IUQ4 282 aa16.98■□□□□ 0.31
BRD9-215ENST00000518250 MAP4K1Q92918 833 aa16.98■□□□□ 0.31
BRD9-215ENST00000518250 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
BRD9-215ENST00000518250 PARK7Q99497 189 aaKnown RBP16.98■□□□□ 0.31
BRD9-215ENST00000518250 PLIN4Q96Q06 1357 aa16.98■□□□□ 0.31
BRD9-215ENST00000518250 IGKV6D-41A0A0C4DH26 115 aa16.97■□□□□ 0.31
BRD9-215ENST00000518250 OSBPP22059 807 aa16.97■□□□□ 0.31
BRD9-215ENST00000518250 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.31
BRD9-215ENST00000518250 CFHR5Q9BXR6 569 aa16.97■□□□□ 0.31
BRD9-215ENST00000518250 CLIP2Q9UDT6 1046 aa16.97■□□□□ 0.31
BRD9-215ENST00000518250 SLC45A1Q9Y2W3 748 aa16.97■□□□□ 0.31
BRD9-215ENST00000518250 TMX2Q9Y320 296 aa16.97■□□□□ 0.31
BRD9-215ENST00000518250 GPR25O00155 361 aa16.96■□□□□ 0.31
BRD9-215ENST00000518250 NMT2O60551 498 aa16.96■□□□□ 0.31
BRD9-215ENST00000518250 CYP21A2P08686 494 aa16.96■□□□□ 0.31
BRD9-215ENST00000518250 ESR2Q92731 530 aa16.96■□□□□ 0.31
BRD9-215ENST00000518250 C12orf42Q96LP6 360 aa16.96■□□□□ 0.31
BRD9-215ENST00000518250 MTMR4Q9NYA4 1195 aa16.96■□□□□ 0.31
BRD9-215ENST00000518250 NYAP2Q9P242 653 aa16.96■□□□□ 0.31
BRD9-215ENST00000518250 PNMA3Q9UL41 463 aa16.96■□□□□ 0.31
BRD9-215ENST00000518250 GTF3C3Q9Y5Q9 886 aa16.96■□□□□ 0.31
BRD9-215ENST00000518250 B4E1Z4 1266 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 TTLL1O95922 423 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 VCAM1P19320 739 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 IRX3P78415 501 aaPredicted RBP16.95■□□□□ 0.3
BRD9-215ENST00000518250 SPICE1Q8N0Z3 855 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 NKX2-3Q8TAU0 364 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 SMCR8Q8TEV9 937 aaPredicted RBP16.95■□□□□ 0.3
BRD9-215ENST00000518250 KRT23Q9C075 422 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
BRD9-215ENST00000518250 VCPKMTQ9H867 229 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 GOPCQ9HD26 462 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
BRD9-215ENST00000518250 CPA4Q9UI42 421 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms