RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 NFXL1Q6ZNB6 911 aa12.4□□□□□ -0.42
PABPC1-203ENST00000517921 RAB11FIP4Q86YS3 637 aa12.4□□□□□ -0.42
PABPC1-203ENST00000517921 ZNF654Q8IZM8 581 aa12.4□□□□□ -0.42
PABPC1-203ENST00000517921 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-203ENST00000517921 SSC5DA1L4H1 1573 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 CCDC69A6NI79 296 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 ZBTB43O43298 467 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 TBC1D12O60347 775 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 EPHX2P34913 555 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 NOVP48745 357 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 CCDC178Q5BJE1 867 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 LDHDQ86WU2 507 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 MICU3Q86XE3 530 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 ANKS1AQ92625 1134 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 CCDC17Q96LX7 622 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 MYL10Q9BUA6 226 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 TRIM34Q9BYJ4 488 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 NCOA5Q9HCD5 579 aaKnown RBP12.39□□□□□ -0.43
PABPC1-203ENST00000517921 NAP1L2Q9ULW6 460 aaPredicted RBP12.39□□□□□ -0.43
PABPC1-203ENST00000517921 SLC12A7Q9Y666 1083 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 TRPM7Q96QT4 1865 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 PARP14Q460N5 1801 aa12.39□□□□□ -0.43
PABPC1-203ENST00000517921 GOLGA8AA7E2F4 631 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 RXRAP19793 462 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 METAP2P50579 478 aaKnown RBP eCLIP12.38□□□□□ -0.433e-17■■■□□ 17.7
PABPC1-203ENST00000517921 RCAN1P53805 252 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 CCT2P78371 535 aaKnown RBP12.38□□□□□ -0.43
PABPC1-203ENST00000517921 MAP3K10Q02779 954 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
PABPC1-203ENST00000517921 SHROOM1Q2M3G4 852 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-203ENST00000517921 CERKLQ49MI3 558 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-203ENST00000517921 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-203ENST00000517921 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 DNAJC5GQ8N7S2 189 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 CEP95Q96GE4 821 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 DEFB129Q9H1M3 183 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.38□□□□□ -0.43
PABPC1-203ENST00000517921 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.38□□□□□ -0.43
PABPC1-203ENST00000517921 CEP350Q5VT06 3117 aa12.38□□□□□ -0.43
PABPC1-203ENST00000517921 DDAH1O94760 285 aa12.37□□□□□ -0.43
PABPC1-203ENST00000517921 GDF11O95390 407 aa12.37□□□□□ -0.43
PABPC1-203ENST00000517921 CTDNEP1O95476 244 aa12.37□□□□□ -0.43
PABPC1-203ENST00000517921 USP50Q70EL3 339 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-203ENST00000517921 CLEC10AQ8IUN9 316 aa12.37□□□□□ -0.43
PABPC1-203ENST00000517921 NSUN7Q8NE18 718 aaKnown RBP12.37□□□□□ -0.43
PABPC1-203ENST00000517921 KLRG1Q96E93 195 aa12.37□□□□□ -0.43
PABPC1-203ENST00000517921 CWC22Q9HCG8 908 aaKnown RBP12.37□□□□□ -0.43
PABPC1-203ENST00000517921 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-203ENST00000517921 MTMR4Q9NYA4 1195 aa12.37□□□□□ -0.43
PABPC1-203ENST00000517921 SMC3Q9UQE7 1217 aa12.37□□□□□ -0.43
PABPC1-203ENST00000517921 PPP2R3BQ9Y5P8 575 aa12.37□□□□□ -0.43
PABPC1-203ENST00000517921 MPHOSPH10O00566 681 aaKnown RBP12.36□□□□□ -0.43
PABPC1-203ENST00000517921 JAK2O60674 1132 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 DTNBO60941 627 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 CDC27P30260 824 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 GUCY1A2P33402 732 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 JAG1P78504 1218 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 TROAPQ12815 778 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 RTN1Q16799 776 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 NBPF12Q5TAG4 269 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-203ENST00000517921 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 CATIPQ7Z7H3 387 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 CCDC144CPQ8IYA2 1237 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 PNMA1Q8ND90 353 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 SMARCC2Q8TAQ2 1214 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 TMEM47Q9BQJ4 181 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 LLPHQ9BRT6 129 aaKnown RBP12.36□□□□□ -0.43
PABPC1-203ENST00000517921 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 CIZ1Q9ULV3 898 aaPredicted RBP12.36□□□□□ -0.43
PABPC1-203ENST00000517921 STX8Q9UNK0 236 aa12.36□□□□□ -0.43
PABPC1-203ENST00000517921 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
PABPC1-203ENST00000517921 TOP1P11387 765 aaKnown RBP12.35□□□□□ -0.43
PABPC1-203ENST00000517921 GJB2P29033 226 aa12.35□□□□□ -0.43
PABPC1-203ENST00000517921 NTRK3Q16288 839 aa12.35□□□□□ -0.43
PABPC1-203ENST00000517921 ABCB5Q2M3G0 1257 aa12.35□□□□□ -0.43
PABPC1-203ENST00000517921 TMEM179Q6ZVK1 233 aa12.35□□□□□ -0.43
PABPC1-203ENST00000517921 NUP133Q8WUM0 1156 aa12.35□□□□□ -0.43
PABPC1-203ENST00000517921 SMCHD1A6NHR9 2005 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 PHF20L1A8MW92 1017 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 DHX16O60231 1041 aaKnown RBP12.34□□□□□ -0.43
PABPC1-203ENST00000517921 TTLL1O95922 423 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 GH2P01242 217 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 CALM1P0DP23 149 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 CALM2P0DP24 149 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 CALM3P0DP25 149 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
PABPC1-203ENST00000517921 GRM4Q14833 912 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 SEPT2Q15019 361 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 FANCBQ8NB91 859 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 ZC3H15Q8WU90 426 aaKnown RBP12.34□□□□□ -0.43
PABPC1-203ENST00000517921 DCPSQ96C86 337 aaKnown RBP12.34□□□□□ -0.43
PABPC1-203ENST00000517921 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 CHMP5Q9NZZ3 219 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 ZBTB21Q9ULJ3 1066 aa12.34□□□□□ -0.43
PABPC1-203ENST00000517921 ADM5C9JUS6 153 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms