RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 AGTPBP1Q9UPW5 1226 aa12.81□□□□□ -0.36
PDGFRB-203ENST00000517660 COL6A1P12109 1028 aa12.8□□□□□ -0.36
PDGFRB-203ENST00000517660 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDGFRB-203ENST00000517660 LRRC26Q2I0M4 334 aa12.8□□□□□ -0.36
PDGFRB-203ENST00000517660 SH3D19Q5HYK7 790 aa12.8□□□□□ -0.36
PDGFRB-203ENST00000517660 USP38Q8NB14 1042 aa12.8□□□□□ -0.36
PDGFRB-203ENST00000517660 RIOK1Q9BRS2 568 aaKnown RBP12.8□□□□□ -0.36
PDGFRB-203ENST00000517660 DCTPP1Q9H773 170 aa12.8□□□□□ -0.36
PDGFRB-203ENST00000517660 DNAJC18Q9H819 358 aa12.8□□□□□ -0.36
PDGFRB-203ENST00000517660 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
PDGFRB-203ENST00000517660 HMGCS2P54868 508 aa12.79□□□□□ -0.36
PDGFRB-203ENST00000517660 JAG1P78504 1218 aa12.79□□□□□ -0.36
PDGFRB-203ENST00000517660 TREML2Q5T2D2 321 aa12.79□□□□□ -0.36
PDGFRB-203ENST00000517660 SMCR8Q8TEV9 937 aaPredicted RBP12.79□□□□□ -0.36
PDGFRB-203ENST00000517660 HAUS7Q99871 368 aa12.79□□□□□ -0.36
PDGFRB-203ENST00000517660 CRNKL1Q9BZJ0 848 aaKnown RBP12.79□□□□□ -0.36
PDGFRB-203ENST00000517660 EHD4Q9H223 541 aa12.79□□□□□ -0.36
PDGFRB-203ENST00000517660 PAG1Q9NWQ8 432 aa12.79□□□□□ -0.36
PDGFRB-203ENST00000517660 ZNF532Q9HCE3 1301 aa12.79□□□□□ -0.36
PDGFRB-203ENST00000517660 TMEM265A0A087WTH1 108 aa12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 TCRBV5S4A2TA0A5A2 114 aa12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 C19orf81C9J6K1 198 aa12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 TNPO2O14787 897 aaKnown RBP12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 GDF11O95390 407 aa12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 BACE1P56817 501 aa12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 TJAP1Q5JTD0 557 aa12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 TATDN1Q6P1N9 297 aa12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 EDC3Q96F86 508 aaKnown RBP12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 SERPINB13Q9UIV8 391 aa12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 ZBTB21Q9ULJ3 1066 aa12.78□□□□□ -0.36
PDGFRB-203ENST00000517660 USP17L10C9JJH3 530 aa12.77□□□□□ -0.37
PDGFRB-203ENST00000517660 POLR3DP05423 398 aaPredicted RBP12.77□□□□□ -0.37
PDGFRB-203ENST00000517660 ADD2P35612 726 aa12.77□□□□□ -0.37
PDGFRB-203ENST00000517660 GCLCP48506 637 aaPredicted RBP12.77□□□□□ -0.37
PDGFRB-203ENST00000517660 ECHDC1Q9NTX5 307 aa12.77□□□□□ -0.37
PDGFRB-203ENST00000517660 TMOD4Q9NZQ9 345 aa12.77□□□□□ -0.37
PDGFRB-203ENST00000517660 TAOK2Q9UL54 1235 aa12.77□□□□□ -0.37
PDGFRB-203ENST00000517660 GH2P01242 217 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 HMGCRP04035 888 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 PLCD1P51178 756 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 MTMR2Q13614 643 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 UBE3CQ15386 1083 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 SHROOM1Q2M3G4 852 aaPredicted RBP12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 CERKLQ49MI3 558 aaPredicted RBP12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 ANKRD13CQ8N6S4 541 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 ASCC2Q9H1I8 757 aaPredicted RBP12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 MCM9Q9NXL9 1143 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 GJD2Q9UKL4 321 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 DOCK2Q92608 1830 aa12.76□□□□□ -0.37
PDGFRB-203ENST00000517660 HOXA7P31268 230 aaPredicted RBP12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 RRP1P56182 461 aaKnown RBP12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 FAM110CQ1W6H9 321 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 MAP3K21Q5TCX8 1036 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 LCORLQ8N3X6 602 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 GPATCH3Q96I76 525 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 ARMT1Q9H993 441 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 CABP5Q9NP86 173 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 DCP1AQ9NPI6 582 aaPredicted RBP12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 XIRP2A4UGR9 3374 aa12.75□□□□□ -0.37
PDGFRB-203ENST00000517660 SYNGAP1Q96PV0 1343 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 FOSL2P15408 326 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 SHMT1P34896 483 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 IRX3P78415 501 aaPredicted RBP12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 GABPAQ06546 454 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 SHHQ15465 462 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 SLFNL1Q499Z3 407 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 C9orf50Q5SZB4 431 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 SDR42E1Q8WUS8 393 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 TRIB2Q92519 343 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 COA7Q96BR5 231 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 P2RX7Q99572 595 aaKnown RBP12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 HMX1Q9NP08 348 aaPredicted RBP12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 ATP8A2Q9NTI2 1148 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 LTBP2Q14767 1821 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 MAST2Q6P0Q8 1798 aa12.74□□□□□ -0.37
PDGFRB-203ENST00000517660 PRKAB2O43741 272 aa12.73□□□□□ -0.37
PDGFRB-203ENST00000517660 MBD4O95243 580 aa12.73□□□□□ -0.37
PDGFRB-203ENST00000517660 RAB3GAP1Q15042 981 aa12.73□□□□□ -0.37
PDGFRB-203ENST00000517660 DOCK3Q8IZD9 2030 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 DOCK1Q14185 1865 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 CYP2D6P10635 497 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 USP14P54578 494 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 LHX8Q68G74 356 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 GTF3C2Q8WUA4 911 aaPredicted RBP12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 YTHDC1Q96MU7 727 aaKnown RBP12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 FEZ1Q99689 392 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 KIAA1683Q9H0B3 1180 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 MORF4L1Q9UBU8 362 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 SWAP70Q9UH65 585 aa12.72□□□□□ -0.37
PDGFRB-203ENST00000517660 USP17L15C9J2P7 530 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms