RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 SRBD1Q8N5C6 995 aaKnown RBP11.26□□□□□ -0.61
EFCAB13-203ENST00000517484 SUPT20HQ8NEM7 779 aa11.26□□□□□ -0.61
EFCAB13-203ENST00000517484 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
EFCAB13-203ENST00000517484 CFAP45Q9UL16 551 aa11.26□□□□□ -0.61
EFCAB13-203ENST00000517484 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
EFCAB13-203ENST00000517484 NAPAP54920 295 aa11.26□□□□□ -0.61
EFCAB13-203ENST00000517484 SYAP1Q96A49 352 aaPredicted RBP11.26□□□□□ -0.61
EFCAB13-203ENST00000517484 SPON1Q9HCB6 807 aa11.26□□□□□ -0.61
EFCAB13-203ENST00000517484 SEC63Q9UGP8 760 aaKnown RBP11.26□□□□□ -0.61
EFCAB13-203ENST00000517484 PARP1P09874 1014 aaKnown RBP11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 GRM1Q13255 1194 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 CSPP1Q1MSJ5 1256 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 KLHL40Q2TBA0 621 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 CPXCR1Q8N123 301 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 NR1I2O75469 434 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 KIF5BP33176 963 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 SLC1A4P43007 532 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 HOMER2Q9NSB8 354 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 ZNRF3Q9ULT6 936 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 KINO60870 393 aaKnown RBP11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 PIGSQ96S52 555 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 SCAND2PQ9GZW5 306 aaPredicted RBP11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 FAM217BQ9NTX9 383 aaPredicted RBP11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 RNF181Q9P0P0 153 aa11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 BIN2Q9UBW5 565 aaPredicted RBP11.25□□□□□ -0.61
EFCAB13-203ENST00000517484 RFX7Q2KHR2 1363 aa11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 DDNO94850 711 aaPredicted RBP11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 GMPSP49915 693 aaPredicted RBP11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 DGKZQ13574 1117 aa11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 BRMS1Q9HCU9 246 aa11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 CNOT7Q9UIV1 285 aaKnown RBP11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 MBD3O95983 291 aa11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 LIFRP42702 1097 aa11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 CC2D2BQ6DHV5 1058 aa11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 OSBPL5Q9H0X9 879 aaPredicted RBP11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 GRPEL1Q9HAV7 217 aa11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 BRWD3Q6RI45 1802 aa11.24□□□□□ -0.61
EFCAB13-203ENST00000517484 KLRG2A4D1S0 409 aaPredicted RBP11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 KCNA3P22001 575 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 UBE2HP62256 183 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 MKRN3Q13064 507 aaKnown RBP11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 RSBN1LQ6PCB5 846 aaPredicted RBP11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 CCDC174Q6PII3 467 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 FCHSD1Q86WN1 690 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 DRC7Q8IY82 874 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 NUP62CLQ9H1M0 184 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 CCDC194A0A1B0GVG4 234 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 SPTLC2O15270 562 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 XRCC6P12956 609 aaKnown RBP eCLIP11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 TNNI2P48788 182 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 NASPP49321 788 aaPredicted RBP11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 ICA1Q05084 483 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 RESTQ13127 1097 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 KIFC2Q96AC6 838 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 LLPHQ9BRT6 129 aaKnown RBP11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 DEXIO95424 95 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 UBXN2AP68543 259 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 RASA3Q14644 834 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 ABCB5Q2M3G0 1257 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 LETM2Q2VYF4 491 aa11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 CTDP1Q9Y5B0 961 aaPredicted RBP11.23□□□□□ -0.61
EFCAB13-203ENST00000517484 NUP188Q5SRE5 1749 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 EEF2P13639 858 aaKnown RBP11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 ECE1P42892 770 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 AFMP43652 599 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 TROAPQ12815 778 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 SPC24Q8NBT2 197 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 ZSCAN16Q9H4T2 348 aaPredicted RBP11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 PCDHB6Q9Y5E3 794 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 VWA3AA6NCI4 1184 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 KIF23Q02241 960 aaPredicted RBP11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 SASS6Q6UVJ0 657 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 PKD2L1Q9P0L9 805 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 PI4KBQ9UBF8 816 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 THSD7AQ9UPZ6 1657 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 TMEM232C9JQI7 657 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 SEC23AQ15436 765 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 INF2Q27J81 1249 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 SMARCC2Q8TAQ2 1214 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 WASF1Q92558 559 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 GJA10Q969M2 543 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 FAM198AQ9UFP1 575 aa11.22□□□□□ -0.61
EFCAB13-203ENST00000517484 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.21□□□□□ -0.61
EFCAB13-203ENST00000517484 H7C1D1 291 aa11.21□□□□□ -0.61
EFCAB13-203ENST00000517484 ADAMTS3O15072 1205 aa11.21□□□□□ -0.61
EFCAB13-203ENST00000517484 IFNAR1P17181 557 aa11.21□□□□□ -0.61
EFCAB13-203ENST00000517484 PPP4CP60510 307 aa11.21□□□□□ -0.61
EFCAB13-203ENST00000517484 RBSNQ9H1K0 784 aa11.21□□□□□ -0.61
EFCAB13-203ENST00000517484 ZNF70Q9UC06 446 aaPredicted RBP11.21□□□□□ -0.61
EFCAB13-203ENST00000517484 PCDHA7Q9UN72 937 aa11.21□□□□□ -0.61
EFCAB13-203ENST00000517484 NFKBIEO00221 500 aa11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 SSBP05455 408 aaKnown RBP eCLIP11.21□□□□□ -0.62
EFCAB13-203ENST00000517484 EPS15P42566 896 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms